Literature DB >> 22807788

Tetra-kis(pyridazine-κN)bis-(seleno-cyanato-κN)nickel(II) pyridazine disolvate.

Susanne Wöhlert, Mario Wriedt, Inke Jess, Christian Näther.   

Abstract

The reaction of nickel(II) nitrate with potassium seleno-cyanate and pyridazine leads to crystals of the title compound, [Ni(NCSe)(2)(C(4)H(4)N(2))(4)]·2C(4)H(4)N(2). The Ni(II) atom is coordinated by two terminal N-bonded seleno-cyanate anions and four pyridazine ligands within a slightly distorted octa-hedral geometry. The crystal structure contains two crystallographically independent pyridazine molecules in cavities of the structure, which are not coordinated to the metal centres. The structure is pseudo-C-centered due to the positioning of the discrete coordination complexes; the non-coordinating pyridazine molecules, however, break the C-centering. In the subcell, these ligands are disordered around centres of inversion, which do not coincide with the mid-point of the mol-ecules.

Entities:  

Year:  2012        PMID: 22807788      PMCID: PMC3393220          DOI: 10.1107/S1600536812028036

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis, structures and properties of related coordination compounds see: Boeckmann & Näther (2010 ▶, 2011 ▶); Wöhlert et al. (2011 ▶, 2012 ▶).

Experimental

Crystal data

[Ni(NCSe)2(C4H4N2)4]·2C4H4N2 M = 749.22 Triclinic, a = 11.2923 (15) Å b = 12.0868 (14) Å c = 12.8220 (15) Å α = 62.324 (9)° β = 88.427 (10)° γ = 88.512 (10)° V = 1549.1 (3) Å3 Z = 2 Mo Kα radiation μ = 3.02 mm−1 T = 293 K 0.25 × 0.14 × 0.10 mm

Data collection

Stoe IPDS-2 diffractometer Absorption correction: numerical (X-SHAPE and X-RED32; Stoe & Cie, 2008 ▶) T min = 0.243, T max = 0.572 15038 measured reflections 6534 independent reflections 4010 reflections with I > 2σ(I) R int = 0.068

Refinement

R[F 2 > 2σ(F 2)] = 0.053 wR(F 2) = 0.129 S = 1.01 6534 reflections 388 parameters H-atom parameters constrained Δρmax = 0.57 e Å−3 Δρmin = −0.46 e Å−3 Data collection: X-AREA (Stoe & Cie, 2008 ▶); cell refinement: X-AREA; data reduction: X-AREA; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶) and DIAMOND (Brandenburg, 2011 ▶); software used to prepare material for publication: XCIF in SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812028036/vn2044sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812028036/vn2044Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ni(NCSe)2(C4H4N2)4]·2C4H4N2Z = 2
Mr = 749.22F(000) = 748
Triclinic, P1Dx = 1.606 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 11.2923 (15) ÅCell parameters from 15038 reflections
b = 12.0868 (14) Åθ = 1.8–26.8°
c = 12.8220 (15) ŵ = 3.02 mm1
α = 62.324 (9)°T = 293 K
β = 88.427 (10)°Block, purple
γ = 88.512 (10)°0.25 × 0.14 × 0.10 mm
V = 1549.1 (3) Å3
Stoe IPDS-2 diffractometer6534 independent reflections
Radiation source: fine-focus sealed tube4010 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.068
ω scanθmax = 26.8°, θmin = 1.8°
Absorption correction: numerical (X-SHAPE and X-RED32; Stoe & Cie, 2008)h = −13→14
Tmin = 0.243, Tmax = 0.572k = −15→15
15038 measured reflectionsl = −16→16
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.053Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.129H-atom parameters constrained
S = 1.01w = 1/[σ2(Fo2) + (0.0583P)2] where P = (Fo2 + 2Fc2)/3
6534 reflections(Δ/σ)max = 0.001
388 parametersΔρmax = 0.57 e Å3
0 restraintsΔρmin = −0.46 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Ni10.75263 (4)0.75195 (4)0.49428 (5)0.03775 (13)
N10.6464 (3)0.8464 (3)0.3514 (3)0.0482 (8)
C10.5667 (4)0.8920 (3)0.2914 (4)0.0449 (9)
Se10.44241 (5)0.96264 (4)0.19891 (5)0.06887 (18)
N20.8589 (3)0.6575 (3)0.6376 (3)0.0480 (8)
C20.9339 (4)0.6062 (3)0.7026 (4)0.0433 (9)
Se21.05284 (4)0.52717 (4)0.80123 (5)0.06587 (17)
N100.6978 (3)0.5804 (3)0.4987 (3)0.0455 (8)
N110.6601 (3)0.4895 (3)0.6020 (3)0.0550 (9)
C110.6253 (4)0.3838 (4)0.6056 (5)0.0663 (13)
H110.59700.32180.67720.080*
C120.6283 (4)0.3596 (4)0.5112 (5)0.0687 (14)
H120.60360.28350.51830.082*
C130.6688 (5)0.4513 (5)0.4069 (5)0.0743 (15)
H130.67420.44030.33980.089*
C140.7019 (4)0.5629 (4)0.4047 (4)0.0589 (11)
H140.72790.62780.33370.071*
N200.6117 (3)0.7459 (3)0.6104 (3)0.0408 (7)
N210.5425 (3)0.8496 (3)0.5696 (3)0.0466 (8)
C210.4570 (4)0.8558 (4)0.6387 (4)0.0541 (11)
H210.40980.92770.61040.065*
C220.4334 (4)0.7615 (4)0.7510 (4)0.0623 (12)
H220.37210.76920.79720.075*
C230.5033 (4)0.6571 (4)0.7912 (4)0.0568 (11)
H230.49070.59030.86550.068*
C240.5940 (4)0.6534 (4)0.7177 (4)0.0480 (9)
H240.64410.58370.74480.058*
N300.8051 (3)0.9236 (3)0.4909 (3)0.0456 (8)
N310.8360 (3)1.0191 (3)0.3876 (3)0.0557 (9)
C310.8674 (4)1.1253 (4)0.3867 (5)0.0661 (13)
H310.89061.19070.31480.079*
C320.8680 (4)1.1452 (5)0.4824 (6)0.0712 (14)
H320.88921.22160.47680.085*
C330.8360 (5)1.0471 (5)0.5874 (5)0.0735 (15)
H330.83451.05360.65690.088*
C340.8056 (4)0.9371 (4)0.5858 (4)0.0581 (11)
H340.78450.86910.65680.070*
N400.8959 (3)0.7555 (3)0.3819 (3)0.0438 (7)
N410.9615 (3)0.6503 (3)0.4249 (3)0.0487 (8)
C411.0520 (4)0.6428 (4)0.3616 (4)0.0589 (12)
H411.09560.56850.39080.071*
C421.0859 (4)0.7394 (5)0.2542 (5)0.0652 (13)
H421.15260.73190.21350.078*
C431.0186 (4)0.8460 (4)0.2098 (4)0.0603 (12)
H431.03640.91370.13730.072*
C440.9220 (4)0.8487 (4)0.2779 (4)0.0505 (10)
H440.87350.91960.24870.061*
N500.8139 (5)0.8781 (4)0.9912 (5)0.0856 (14)
N510.8770 (5)0.8446 (5)0.9251 (5)0.0989 (16)
C510.8485 (7)0.7476 (7)0.9162 (6)0.103 (2)
H510.89550.72540.86790.123*
C520.7534 (8)0.6741 (6)0.9729 (8)0.109 (3)
H520.73490.60460.96390.131*
C530.6881 (6)0.7093 (5)1.0433 (7)0.107 (3)
H530.62220.66481.08560.128*
C540.7233 (6)0.8112 (6)1.0487 (6)0.0923 (19)
H540.67990.83611.09710.111*
N601.2999 (4)0.5993 (4)1.0408 (4)0.0718 (11)
N611.3853 (4)0.6604 (4)1.0600 (4)0.0741 (12)
C611.3687 (5)0.7775 (5)1.0313 (5)0.0755 (15)
H611.42940.81851.04620.091*
C621.2676 (6)0.8459 (5)0.9802 (5)0.0828 (17)
H621.26070.93040.95930.099*
C631.1803 (5)0.7846 (5)0.9622 (5)0.0751 (14)
H631.10880.82410.92990.090*
C641.2007 (5)0.6605 (5)0.9935 (5)0.0729 (14)
H641.14110.61690.98050.088*
U11U22U33U12U13U23
Ni10.0371 (2)0.0319 (2)0.0395 (2)0.00175 (16)0.00078 (17)−0.01283 (18)
N10.048 (2)0.0464 (18)0.0447 (19)0.0053 (16)−0.0025 (16)−0.0168 (16)
C10.056 (3)0.0323 (18)0.043 (2)−0.0050 (18)0.0046 (19)−0.0142 (17)
Se10.0648 (3)0.0556 (3)0.0712 (4)0.0030 (2)−0.0256 (3)−0.0156 (3)
N20.0443 (19)0.0453 (18)0.048 (2)0.0073 (15)−0.0059 (16)−0.0165 (16)
C20.044 (2)0.0390 (19)0.043 (2)−0.0033 (17)0.0035 (18)−0.0166 (18)
Se20.0581 (3)0.0605 (3)0.0658 (3)0.0073 (2)−0.0216 (2)−0.0175 (3)
N100.0373 (18)0.0401 (16)0.058 (2)0.0012 (14)−0.0016 (15)−0.0221 (16)
N110.062 (2)0.0395 (17)0.061 (2)−0.0087 (16)0.0092 (18)−0.0209 (17)
C110.062 (3)0.047 (2)0.083 (4)−0.014 (2)0.014 (3)−0.024 (2)
C120.063 (3)0.054 (3)0.101 (4)−0.010 (2)0.000 (3)−0.045 (3)
C130.080 (4)0.079 (3)0.089 (4)−0.014 (3)0.003 (3)−0.059 (3)
C140.061 (3)0.059 (3)0.060 (3)−0.011 (2)0.003 (2)−0.030 (2)
N200.0432 (18)0.0324 (14)0.0427 (18)0.0033 (13)−0.0005 (14)−0.0140 (14)
N210.0462 (19)0.0394 (16)0.0478 (19)0.0057 (14)0.0030 (15)−0.0154 (15)
C210.050 (3)0.047 (2)0.062 (3)0.013 (2)0.001 (2)−0.023 (2)
C220.059 (3)0.068 (3)0.058 (3)0.006 (2)0.011 (2)−0.028 (2)
C230.066 (3)0.051 (2)0.048 (3)−0.001 (2)0.009 (2)−0.019 (2)
C240.052 (2)0.042 (2)0.048 (2)0.0027 (18)0.0011 (19)−0.0186 (19)
N300.0446 (19)0.0385 (16)0.054 (2)−0.0024 (14)0.0021 (16)−0.0213 (16)
N310.059 (2)0.0398 (17)0.063 (2)−0.0069 (16)0.0085 (18)−0.0194 (17)
C310.065 (3)0.043 (2)0.086 (4)−0.006 (2)0.007 (3)−0.026 (2)
C320.060 (3)0.058 (3)0.105 (4)−0.014 (2)0.003 (3)−0.045 (3)
C330.073 (3)0.084 (4)0.088 (4)−0.017 (3)0.001 (3)−0.060 (3)
C340.060 (3)0.058 (3)0.062 (3)−0.012 (2)0.000 (2)−0.031 (2)
N400.0414 (18)0.0371 (16)0.0481 (19)0.0000 (14)0.0026 (15)−0.0159 (15)
N410.047 (2)0.0401 (16)0.052 (2)0.0061 (15)0.0027 (16)−0.0157 (15)
C410.057 (3)0.058 (3)0.065 (3)0.009 (2)0.006 (2)−0.032 (2)
C420.057 (3)0.073 (3)0.064 (3)0.002 (2)0.016 (2)−0.031 (3)
C430.068 (3)0.058 (3)0.046 (3)−0.015 (2)0.016 (2)−0.017 (2)
C440.057 (3)0.039 (2)0.047 (2)−0.0022 (18)0.000 (2)−0.0127 (18)
N500.084 (3)0.067 (3)0.116 (4)−0.002 (3)−0.010 (3)−0.050 (3)
N510.088 (4)0.075 (3)0.115 (4)0.010 (3)0.007 (3)−0.030 (3)
C510.119 (6)0.105 (5)0.100 (5)0.046 (5)−0.027 (4)−0.062 (4)
C520.129 (6)0.057 (3)0.156 (7)0.027 (4)−0.089 (6)−0.058 (4)
C530.066 (4)0.059 (3)0.156 (7)−0.011 (3)−0.016 (4)−0.015 (4)
C540.095 (5)0.088 (4)0.094 (5)0.012 (4)0.000 (4)−0.043 (4)
N600.080 (3)0.049 (2)0.078 (3)−0.008 (2)−0.006 (2)−0.022 (2)
N610.072 (3)0.061 (2)0.075 (3)−0.004 (2)−0.005 (2)−0.019 (2)
C610.082 (4)0.072 (3)0.077 (4)−0.022 (3)0.002 (3)−0.037 (3)
C620.103 (5)0.052 (3)0.091 (4)−0.002 (3)0.018 (4)−0.033 (3)
C630.065 (3)0.075 (3)0.080 (4)0.009 (3)0.007 (3)−0.032 (3)
C640.075 (4)0.074 (3)0.072 (4)−0.025 (3)0.006 (3)−0.035 (3)
Ni1—N12.051 (4)C32—C331.363 (8)
Ni1—N22.055 (4)C32—H320.9300
Ni1—N102.154 (3)C33—C341.391 (6)
Ni1—N202.129 (3)C33—H330.9300
Ni1—N302.153 (3)C34—H340.9300
Ni1—N402.124 (3)N40—C441.317 (5)
N1—C11.151 (5)N40—N411.339 (4)
C1—Se11.786 (5)N41—C411.315 (5)
N2—C21.152 (5)C41—C421.381 (7)
C2—Se21.794 (4)C41—H410.9300
N10—C141.317 (6)C42—C431.362 (6)
N10—N111.335 (5)C42—H420.9300
N11—C111.326 (5)C43—C441.387 (6)
C11—C121.371 (7)C43—H430.9300
C11—H110.9300C44—H440.9300
C12—C131.357 (8)N50—N511.289 (7)
C12—H120.9300N50—C541.301 (8)
C13—C141.398 (6)N51—C511.280 (9)
C13—H130.9300C51—C521.370 (11)
C14—H140.9300C51—H510.9300
N20—C241.323 (5)C52—C531.358 (11)
N20—N211.348 (4)C52—H520.9300
N21—C211.317 (5)C53—C541.336 (9)
C21—C221.384 (6)C53—H530.9300
C21—H210.9300C54—H540.9300
C22—C231.359 (6)N60—N611.324 (6)
C22—H220.9300N60—C641.322 (7)
C23—C241.386 (6)N61—C611.296 (6)
C23—H230.9300C61—C621.380 (8)
C24—H240.9300C61—H610.9300
N30—C341.301 (5)C62—C631.336 (8)
N30—N311.335 (5)C62—H620.9300
N31—C311.334 (5)C63—C641.376 (7)
C31—C321.356 (7)C63—H630.9300
C31—H310.9300C64—H640.9300
N1—Ni1—N2179.88 (15)N31—C31—H31117.4
N1—Ni1—N4090.53 (13)C32—C31—H31117.4
N2—Ni1—N4089.57 (13)C31—C32—C33116.5 (4)
N1—Ni1—N2090.85 (13)C31—C32—H32121.8
N2—Ni1—N2089.05 (13)C33—C32—H32121.8
N40—Ni1—N20178.62 (14)C32—C33—C34117.1 (5)
N1—Ni1—N3091.64 (13)C32—C33—H33121.5
N2—Ni1—N3088.30 (13)C34—C33—H33121.5
N40—Ni1—N3092.71 (12)N30—C34—C33123.9 (5)
N20—Ni1—N3087.31 (12)N30—C34—H34118.0
N1—Ni1—N1088.17 (13)C33—C34—H34118.0
N2—Ni1—N1091.89 (13)C44—N40—N41120.0 (3)
N40—Ni1—N1088.07 (12)C44—N40—Ni1126.0 (3)
N20—Ni1—N1091.92 (12)N41—N40—Ni1114.0 (2)
N30—Ni1—N10179.20 (13)C41—N41—N40118.7 (3)
C1—N1—Ni1164.0 (3)N41—C41—C42123.6 (4)
N1—C1—Se1179.7 (4)N41—C41—H41118.2
C2—N2—Ni1167.3 (4)C42—C41—H41118.2
N2—C2—Se2178.9 (4)C43—C42—C41117.8 (4)
C14—N10—N11120.1 (3)C43—C42—H42121.1
C14—N10—Ni1122.3 (3)C41—C42—H42121.1
N11—N10—Ni1117.5 (3)C42—C43—C44116.7 (4)
C11—N11—N10118.0 (4)C42—C43—H43121.6
N11—C11—C12124.6 (5)C44—C43—H43121.6
N11—C11—H11117.7N40—C44—C43123.1 (4)
C12—C11—H11117.7N40—C44—H44118.4
C13—C12—C11117.2 (4)C43—C44—H44118.4
C13—C12—H12121.4N51—N50—C54119.0 (5)
C11—C12—H12121.4C51—N51—N50119.5 (6)
C12—C13—C14117.1 (5)N51—C51—C52124.4 (7)
C12—C13—H13121.4N51—C51—H51117.8
C14—C13—H13121.4C52—C51—H51117.8
N10—C14—C13122.9 (5)C53—C52—C51115.7 (5)
N10—C14—H14118.5C53—C52—H52122.2
C13—C14—H14118.5C51—C52—H52122.2
C24—N20—N21120.4 (3)C54—C53—C52116.6 (6)
C24—N20—Ni1124.8 (2)C54—C53—H53121.7
N21—N20—Ni1114.6 (2)C52—C53—H53121.7
C21—N21—N20118.4 (3)N50—C54—C53124.8 (7)
N21—C21—C22123.7 (4)N50—C54—H54117.6
N21—C21—H21118.1C53—C54—H54117.6
C22—C21—H21118.1N61—N60—C64118.5 (4)
C23—C22—C21117.4 (4)C61—N61—N60118.9 (5)
C23—C22—H22121.3N61—C61—C62124.9 (5)
C21—C22—H22121.3N61—C61—H61117.6
C22—C23—C24117.9 (4)C62—C61—H61117.6
C22—C23—H23121.1C63—C62—C61116.7 (5)
C24—C23—H23121.1C63—C62—H62121.7
N20—C24—C23122.1 (4)C61—C62—H62121.7
N20—C24—H24118.9C62—C63—C64117.0 (5)
C23—C24—H24118.9C62—C63—H63121.5
C34—N30—N31119.5 (3)C64—C63—H63121.5
C34—N30—Ni1121.9 (3)N60—C64—C63124.1 (5)
N31—N30—Ni1118.6 (3)N60—C64—H64118.0
C31—N31—N30117.9 (4)C63—C64—H64118.0
N31—C31—C32125.1 (5)
Table 1

Selected bond lengths (Å)

Ni1—N12.051 (4)
Ni1—N22.055 (4)
Ni1—N102.154 (3)
Ni1—N202.129 (3)
Ni1—N302.153 (3)
Ni1—N402.124 (3)
  6 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Coexistence of metamagnetism and slow relaxation of the magnetization in a cobalt thiocyanate 2D coordination network.

Authors:  S Wöhlert; J Boeckmann; M Wriedt; Christian Näther
Journal:  Angew Chem Int Ed Engl       Date:  2011-06-10       Impact factor: 15.336

3.  A rational route to SCM materials based on a 1-D cobalt selenocyanato coordination polymer.

Authors:  Jan Boeckmann; Christian Näther
Journal:  Chem Commun (Camb)       Date:  2011-05-27       Impact factor: 6.222

4.  Solid-state transformation of [Co(NCS)2(pyridine)4] into [Co(NCS)2(pyridine)2]n: from Curie-Weiss paramagnetism to single chain magnetic behaviour.

Authors:  Jan Boeckmann; Christian Näther
Journal:  Dalton Trans       Date:  2010-10-14       Impact factor: 4.390

5.  Tetra-kis(pyridazine-κN)bis-(thio-cyanato-κN)nickel(II) pyridazine disolvate.

Authors:  Susanne Wöhlert; Mario Wriedt; Inke Jess; Christian Näther
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-05-26

6.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  6 in total

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