Literature DB >> 22719343

Tetra-kis(pyridazine-κN)bis-(thio-cyanato-κN)nickel(II) pyridazine disolvate.

Susanne Wöhlert, Mario Wriedt, Inke Jess, Christian Näther.   

Abstract

The reaction of nickel(II) thio-cyanate with an excess of pyridazine leads to single crystals of the title compound, [Ni(NCS)(2)(C(4)H(4)N(2))(4)]·2C(4)H(4)N(2). The Ni(II) cations are coordinated by two terminal N-bonded thio-cyanate anions (trans) and four pyridazine ligands in a slightly distorted octa-hedral geometry. The discrete complexes are arranged into layers parallel to the ab plane which are separated by additional non-coordinated pyridazine ligands.

Entities:  

Year:  2012        PMID: 22719343      PMCID: PMC3379122          DOI: 10.1107/S1600536812023306

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related pyridazine coordination compounds, see: Boeckmann et al. (2011 ▶); Lloret et al. (1998 ▶); Yi et al. (2006 ▶); Wriedt & Näther (2009 ▶, 2011 ▶).

Experimental

Crystal data

[Ni(NCS)2(C4H4N2)4]·2C4H4N2 M = 655.42 Triclinic, a = 11.2111 (9) Å b = 12.033 (1) Å c = 12.5409 (10) Å α = 62.287 (9)° β = 88.983 (10)° γ = 88.949 (10)° V = 1497.4 (2) Å3 Z = 2 Mo Kα radiation μ = 0.83 mm−1 T = 200 K 0.06 × 0.04 × 0.03 mm

Data collection

Stoe IPDS-1 diffractometer Absorption correction: numerical (X-SHAPE and X-RED32; Stoe & Cie, 2008 ▶) T min = 0.916, T max = 0.973 11937 measured reflections 6400 independent reflections 4719 reflections with I > 2σ(I) R int = 0.029

Refinement

R[F 2 > 2σ(F 2)] = 0.032 wR(F 2) = 0.084 S = 0.97 6400 reflections 389 parameters H-atom parameters constrained Δρmax = 0.39 e Å−3 Δρmin = −0.40 e Å−3 Data collection: X-AREA (Stoe & Cie, 2008 ▶); cell refinement: X-AREA; data reduction: X-AREA; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: XP in SHELXTL (Sheldrick, 2008 ▶) and DIAMOND (Brandenburg, 2011 ▶); software used to prepare material for publication: XCIF in SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812023306/bt5930sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812023306/bt5930Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ni(NCS)2(C4H4N2)4]·2C4H4N2Z = 2
Mr = 655.42F(000) = 676
Triclinic, P1Dx = 1.454 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 11.2111 (9) ÅCell parameters from 11937 reflections
b = 12.033 (1) Åθ = 2.6–27.0°
c = 12.5409 (10) ŵ = 0.83 mm1
α = 62.287 (9)°T = 200 K
β = 88.983 (10)°Block, light-green
γ = 88.949 (10)°0.06 × 0.04 × 0.03 mm
V = 1497.4 (2) Å3
Stoe IPDS-1 diffractometer6400 independent reflections
Radiation source: fine-focus sealed tube4719 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.029
phi scanθmax = 27.0°, θmin = 2.6°
Absorption correction: numerical (X-SHAPE and X-RED32; Stoe & Cie, 2008)h = −14→14
Tmin = 0.916, Tmax = 0.973k = −15→15
11937 measured reflectionsl = −16→16
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.032H-atom parameters constrained
wR(F2) = 0.084w = 1/[σ2(Fo2) + (0.0504P)2] where P = (Fo2 + 2Fc2)/3
S = 0.97(Δ/σ)max = 0.001
6400 reflectionsΔρmax = 0.39 e Å3
389 parametersΔρmin = −0.40 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0149 (15)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Ni10.752765 (19)0.75179 (2)0.993234 (18)0.01640 (8)
N20.85894 (13)0.65700 (14)1.14111 (13)0.0237 (3)
C20.93634 (15)0.60587 (16)1.20694 (14)0.0195 (3)
S21.04648 (4)0.53396 (5)1.29882 (4)0.03462 (13)
N10.64734 (13)0.84717 (14)0.84542 (13)0.0241 (3)
C10.56476 (16)0.89404 (16)0.78585 (14)0.0204 (4)
S10.44826 (5)0.95934 (5)0.70169 (5)0.03734 (14)
N100.69744 (12)0.57958 (14)0.99727 (12)0.0212 (3)
N110.65668 (14)0.48848 (14)1.10237 (14)0.0281 (3)
C110.62296 (18)0.38099 (18)1.10720 (19)0.0332 (4)
H110.59230.31801.18150.040*
C120.62968 (18)0.3551 (2)1.0107 (2)0.0365 (5)
H120.60560.27651.01800.044*
C130.67269 (19)0.4479 (2)0.9041 (2)0.0398 (5)
H130.68060.43590.83460.048*
C140.70445 (17)0.5607 (2)0.90134 (17)0.0301 (4)
H140.73230.62690.82750.036*
N200.61071 (12)0.74611 (13)1.11065 (12)0.0185 (3)
N210.54160 (13)0.85064 (14)1.06923 (12)0.0221 (3)
C210.45590 (16)0.85656 (18)1.14045 (16)0.0267 (4)
H210.40840.93091.11150.032*
C220.43142 (18)0.7605 (2)1.25495 (17)0.0329 (5)
H220.36820.76801.30270.039*
C230.50158 (17)0.65455 (18)1.29662 (16)0.0287 (4)
H230.48870.58551.37400.034*
C240.59298 (16)0.65231 (16)1.22036 (14)0.0223 (4)
H240.64440.58091.24810.027*
N300.80605 (12)0.92471 (14)0.98921 (13)0.0210 (3)
N310.83861 (14)1.02153 (14)0.88415 (14)0.0278 (3)
C310.86974 (18)1.12832 (19)0.88297 (19)0.0336 (4)
H310.89401.19600.80840.040*
C320.86879 (19)1.1465 (2)0.9847 (2)0.0382 (5)
H320.89151.22420.98040.046*
C330.83376 (19)1.0480 (2)1.0911 (2)0.0387 (5)
H330.82981.05491.16350.046*
C340.80415 (17)0.93705 (19)1.08911 (17)0.0290 (4)
H340.78150.86691.16270.035*
N400.89770 (12)0.75517 (13)0.87968 (12)0.0192 (3)
N410.96253 (13)0.64770 (14)0.92420 (12)0.0228 (3)
C411.05424 (16)0.64035 (18)0.85962 (16)0.0266 (4)
H411.09870.56400.89020.032*
C421.08890 (17)0.7384 (2)0.74940 (17)0.0316 (4)
H421.15670.73030.70690.038*
C431.02254 (18)0.84661 (19)0.70416 (16)0.0298 (4)
H431.04200.91630.62910.036*
C440.92462 (16)0.85029 (17)0.77327 (15)0.0236 (4)
H440.87560.92360.74290.028*
N500.70575 (16)1.39686 (16)0.45667 (15)0.0364 (4)
N510.61715 (16)1.33478 (17)0.43752 (15)0.0374 (4)
C510.6319 (2)1.2132 (2)0.47219 (19)0.0387 (5)
H510.56861.17010.45870.046*
C520.7336 (2)1.1454 (2)0.5268 (2)0.0403 (5)
H520.74031.05830.55010.048*
C530.82377 (19)1.2079 (2)0.54582 (19)0.0371 (5)
H530.89591.16660.58310.044*
C540.80526 (19)1.3355 (2)0.50801 (18)0.0339 (5)
H540.86751.38120.51970.041*
N601.18977 (17)1.12073 (18)0.50816 (18)0.0425 (4)
N611.12255 (18)1.1575 (2)0.57472 (19)0.0497 (5)
C611.1514 (3)1.2601 (3)0.5806 (2)0.0525 (7)
H611.10191.28540.62790.063*
C621.2485 (3)1.3331 (2)0.5228 (3)0.0559 (7)
H621.26651.40610.53010.067*
C631.3172 (2)1.2955 (2)0.4547 (3)0.0535 (7)
H631.38551.34110.41200.064*
C641.2832 (2)1.1884 (2)0.4506 (2)0.0444 (6)
H641.33011.16130.40300.053*
U11U22U33U12U13U23
Ni10.01669 (12)0.01298 (12)0.01687 (12)0.00196 (7)0.00033 (7)−0.00480 (8)
N20.0236 (7)0.0211 (8)0.0227 (7)0.0033 (6)−0.0016 (6)−0.0072 (6)
C20.0225 (8)0.0150 (8)0.0199 (7)−0.0005 (7)0.0014 (7)−0.0073 (7)
S20.0301 (3)0.0309 (3)0.0348 (3)0.0052 (2)−0.0147 (2)−0.0082 (2)
N10.0249 (8)0.0231 (8)0.0215 (7)0.0036 (6)−0.0018 (6)−0.0081 (6)
C10.0262 (9)0.0146 (8)0.0191 (7)−0.0016 (7)0.0019 (7)−0.0068 (7)
S10.0335 (3)0.0295 (3)0.0393 (3)0.0034 (2)−0.0174 (2)−0.0074 (2)
N100.0193 (7)0.0183 (8)0.0248 (7)−0.0001 (6)0.0008 (6)−0.0090 (6)
N110.0330 (8)0.0186 (8)0.0301 (8)−0.0047 (7)0.0069 (7)−0.0091 (7)
C110.0324 (10)0.0206 (10)0.0431 (11)−0.0054 (8)0.0038 (9)−0.0118 (9)
C120.0315 (10)0.0283 (11)0.0568 (13)−0.0053 (8)−0.0018 (9)−0.0256 (10)
C130.0416 (12)0.0464 (14)0.0484 (12)−0.0086 (10)−0.0005 (10)−0.0361 (11)
C140.0308 (10)0.0336 (11)0.0295 (9)−0.0064 (8)0.0011 (8)−0.0175 (8)
N200.0192 (7)0.0154 (7)0.0195 (6)0.0027 (6)0.0004 (5)−0.0070 (6)
N210.0226 (7)0.0183 (8)0.0222 (7)0.0053 (6)0.0007 (6)−0.0070 (6)
C210.0270 (9)0.0252 (10)0.0286 (9)0.0076 (8)0.0008 (7)−0.0136 (8)
C220.0325 (10)0.0377 (12)0.0293 (9)0.0027 (9)0.0093 (8)−0.0168 (9)
C230.0337 (10)0.0272 (10)0.0204 (8)0.0000 (8)0.0055 (7)−0.0071 (8)
C240.0260 (9)0.0181 (9)0.0203 (8)0.0013 (7)0.0006 (7)−0.0068 (7)
N300.0185 (7)0.0172 (7)0.0260 (7)0.0019 (6)−0.0016 (6)−0.0089 (6)
N310.0319 (8)0.0174 (8)0.0314 (8)−0.0033 (6)0.0060 (7)−0.0093 (7)
C310.0341 (10)0.0224 (10)0.0412 (11)−0.0069 (8)0.0062 (9)−0.0123 (9)
C320.0348 (11)0.0295 (11)0.0588 (13)−0.0059 (9)−0.0007 (10)−0.0275 (11)
C330.0408 (12)0.0428 (13)0.0445 (11)−0.0090 (10)−0.0011 (9)−0.0302 (11)
C340.0325 (10)0.0276 (10)0.0281 (9)−0.0054 (8)−0.0010 (8)−0.0138 (8)
N400.0194 (7)0.0157 (7)0.0205 (6)0.0001 (6)0.0011 (5)−0.0068 (6)
N410.0234 (7)0.0181 (8)0.0240 (7)0.0045 (6)0.0023 (6)−0.0075 (6)
C410.0260 (9)0.0260 (10)0.0278 (9)0.0054 (8)0.0025 (7)−0.0127 (8)
C420.0292 (10)0.0374 (12)0.0289 (9)0.0002 (8)0.0104 (8)−0.0164 (9)
C430.0363 (10)0.0280 (10)0.0205 (8)−0.0062 (8)0.0080 (7)−0.0076 (8)
C440.0311 (9)0.0159 (9)0.0200 (8)0.0015 (7)0.0013 (7)−0.0053 (7)
N500.0455 (10)0.0223 (9)0.0359 (9)−0.0048 (8)−0.0030 (8)−0.0086 (7)
N510.0394 (10)0.0320 (10)0.0333 (9)−0.0052 (8)−0.0048 (7)−0.0086 (8)
C510.0455 (13)0.0367 (12)0.0370 (10)−0.0160 (10)0.0042 (9)−0.0192 (10)
C520.0516 (14)0.0242 (11)0.0462 (12)−0.0015 (10)0.0107 (10)−0.0176 (10)
C530.0339 (11)0.0377 (12)0.0352 (10)0.0051 (9)0.0074 (8)−0.0137 (9)
C540.0351 (11)0.0321 (11)0.0322 (10)−0.0095 (9)0.0004 (8)−0.0127 (9)
N600.0403 (10)0.0337 (10)0.0583 (12)−0.0004 (8)−0.0048 (9)−0.0254 (9)
N610.0437 (11)0.0400 (12)0.0573 (12)0.0049 (9)0.0056 (9)−0.0163 (10)
C610.0640 (17)0.0532 (16)0.0474 (13)0.0264 (14)−0.0112 (12)−0.0299 (13)
C620.0652 (17)0.0297 (13)0.0843 (19)0.0167 (12)−0.0445 (15)−0.0353 (14)
C630.0351 (12)0.0342 (13)0.0771 (18)−0.0056 (10)−0.0074 (12)−0.0136 (13)
C640.0445 (13)0.0424 (14)0.0494 (13)0.0022 (11)0.0042 (10)−0.0242 (11)
Ni1—N12.0494 (15)C32—C331.366 (3)
Ni1—N22.0538 (15)C32—H320.9500
Ni1—N402.1298 (13)C33—C341.393 (3)
Ni1—N202.1299 (13)C33—H330.9500
Ni1—N102.1516 (15)C34—H340.9500
Ni1—N302.1530 (15)N40—C441.327 (2)
N2—C21.160 (2)N40—N411.3494 (19)
C2—S21.6387 (18)N41—C411.325 (2)
N1—C11.161 (2)C41—C421.391 (3)
C1—S11.6362 (18)C41—H410.9500
N10—C141.325 (2)C42—C431.365 (3)
N10—N111.342 (2)C42—H420.9500
N11—C111.328 (3)C43—C441.399 (2)
C11—C121.384 (3)C43—H430.9500
C11—H110.9500C44—H440.9500
C12—C131.369 (3)N50—C541.326 (3)
C12—H120.9500N50—N511.343 (3)
C13—C141.394 (3)N51—C511.326 (3)
C13—H130.9500C51—C521.382 (3)
C14—H140.9500C51—H510.9500
N20—C241.327 (2)C52—C531.360 (3)
N20—N211.3502 (19)C52—H520.9500
N21—C211.324 (2)C53—C541.393 (3)
C21—C221.388 (3)C53—H530.9500
C21—H210.9500C54—H540.9500
C22—C231.370 (3)N60—C641.318 (3)
C22—H220.9500N60—N611.331 (3)
C23—C241.398 (2)N61—C611.316 (3)
C23—H230.9500C61—C621.378 (4)
C24—H240.9500C61—H610.9500
N30—C341.328 (2)C62—C631.360 (4)
N30—N311.341 (2)C62—H620.9500
N31—C311.331 (3)C63—C641.375 (4)
C31—C321.391 (3)C63—H630.9500
C31—H310.9500C64—H640.9500
N1—Ni1—N2179.71 (7)N31—C31—H31118.1
N1—Ni1—N4090.25 (6)C32—C31—H31118.1
N2—Ni1—N4089.64 (6)C33—C32—C31117.2 (2)
N1—Ni1—N2091.20 (6)C33—C32—H32121.4
N2—Ni1—N2088.90 (6)C31—C32—H32121.4
N40—Ni1—N20178.54 (6)C32—C33—C34117.37 (19)
N1—Ni1—N1088.37 (6)C32—C33—H33121.3
N2—Ni1—N1091.90 (6)C34—C33—H33121.3
N40—Ni1—N1087.95 (5)N30—C34—C33123.06 (18)
N20—Ni1—N1092.16 (5)N30—C34—H34118.5
N1—Ni1—N3091.25 (6)C33—C34—H34118.5
N2—Ni1—N3088.48 (6)C44—N40—N41120.64 (14)
N40—Ni1—N3092.57 (5)C44—N40—Ni1125.54 (12)
N20—Ni1—N3087.33 (5)N41—N40—Ni1113.81 (10)
N10—Ni1—N30179.36 (5)C41—N41—N40118.32 (14)
C2—N2—Ni1165.91 (13)N41—C41—C42123.54 (17)
N2—C2—S2179.46 (15)N41—C41—H41118.2
C1—N1—Ni1161.54 (13)C42—C41—H41118.2
N1—C1—S1179.63 (17)C43—C42—C41117.98 (16)
C14—N10—N11119.91 (16)C43—C42—H42121.0
C14—N10—Ni1122.41 (13)C41—C42—H42121.0
N11—N10—Ni1117.67 (11)C42—C43—C44117.04 (16)
C11—N11—N10118.70 (15)C42—C43—H43121.5
N11—C11—C12124.07 (19)C44—C43—H43121.5
N11—C11—H11118.0N40—C44—C43122.43 (16)
C12—C11—H11118.0N40—C44—H44118.8
C13—C12—C11116.88 (19)C43—C44—H44118.8
C13—C12—H12121.6C54—N50—N51119.27 (18)
C11—C12—H12121.6C51—N51—N50118.58 (19)
C12—C13—C14117.59 (18)N51—C51—C52124.1 (2)
C12—C13—H13121.2N51—C51—H51117.9
C14—C13—H13121.2C52—C51—H51117.9
N10—C14—C13122.82 (18)C53—C52—C51117.5 (2)
N10—C14—H14118.6C53—C52—H52121.2
C13—C14—H14118.6C51—C52—H52121.2
C24—N20—N21120.47 (13)C52—C53—C54116.8 (2)
C24—N20—Ni1124.29 (11)C52—C53—H53121.6
N21—N20—Ni1115.09 (10)C54—C53—H53121.6
C21—N21—N20118.35 (14)N50—C54—C53123.7 (2)
N21—C21—C22123.81 (17)N50—C54—H54118.1
N21—C21—H21118.1C53—C54—H54118.1
C22—C21—H21118.1C64—N60—N61118.7 (2)
C23—C22—C21117.67 (16)C61—N61—N60119.0 (2)
C23—C22—H22121.2N61—C61—C62124.4 (2)
C21—C22—H22121.2N61—C61—H61117.8
C22—C23—C24117.13 (17)C62—C61—H61117.8
C22—C23—H23121.4C63—C62—C61116.7 (2)
C24—C23—H23121.4C63—C62—H62121.7
N20—C24—C23122.52 (16)C61—C62—H62121.7
N20—C24—H24118.7C62—C63—C64116.9 (2)
C23—C24—H24118.7C62—C63—H63121.6
C34—N30—N31119.93 (16)C64—C63—H63121.6
C34—N30—Ni1120.60 (12)N60—C64—C63124.4 (2)
N31—N30—Ni1119.45 (11)N60—C64—H64117.8
C31—N31—N30118.68 (16)C63—C64—H64117.8
N31—C31—C32123.75 (19)
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Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
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1.  Tetra-kis(pyridazine-κN)bis-(seleno-cyanato-κN)cobalt(II) pyridazine disolvate.

Authors:  Susanne Wöhlert; Mario Wriedt; Inke Jess; Christian Näther
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-06-23

2.  Tetra-kis(pyridazine-κN)bis-(seleno-cyanato-κN)nickel(II) pyridazine disolvate.

Authors:  Susanne Wöhlert; Mario Wriedt; Inke Jess; Christian Näther
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-06-23
  2 in total

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