Literature DB >> 22807747

Tetra-aqua-(2,2'-bipyridine-κ²N,N')nickel(II) sulfate.

Sujirat Boonlue1, Chatphorn Theppitak, Kittipong Chainok.   

Abstract

The asymmetric unit of the title complex, [Ni(C₁₀H₈N₂)(H₂O)₄]SO₄, consists of a complex [Ni(bipy)(H₂O)₄]²⁺ cation (bipy = 2,2'-bipyridine) and a non-coordinating [SO₄]²⁻ anion. The Ni(II) atom is six-coordinated in a distorted octa-hedral geometry defined by the two N atoms of the bipy ligand and four water O atoms. The crystal structure contains extensive classical O-H⋯O hydrogen bonds, which link the ions into a two-dimensional array in the ab plane. Layers are connected into a three-dimensional supra-molecular structure by C-H⋯O inter-actions.

Entities:  

Year:  2012        PMID: 22807747      PMCID: PMC3393179          DOI: 10.1107/S160053681202538X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the structures and properties of coordination complexes with bipy as a ligand, see: Graaf & Sousa (2010 ▶); Baruah et al. (2007 ▶); Schubert & Eschbaumer (2002 ▶); Harvey et al. (1999 ▶); Damrauer et al. (1997 ▶); Healy et al. (1984 ▶)

Experimental

Crystal data

[Ni(C10H8N2)(H2O)4]SO4 M = 383.02 Orthorhombic, a = 12.3035 (7) Å b = 11.6560 (7) Å c = 20.7112 (10) Å V = 2970.2 (3) Å3 Z = 8 Mo Kα radiation μ = 1.49 mm−1 T = 298 K 0.25 × 0.20 × 0.20 mm

Data collection

Bruker SMART APEX CCD area detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2003 ▶) T min = 0.707, T max = 0.755 11218 measured reflections 3626 independent reflections 3024 reflections with I > 2σ(I) R int = 0.045

Refinement

R[F 2 > 2σ(F 2)] = 0.039 wR(F 2) = 0.092 S = 1.07 3626 reflections 231 parameters 12 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.58 e Å−3 Δρmin = −0.70 e Å−3 Data collection: SMART (Bruker, 2001 ▶); cell refinement: SAINT (Bruker, 2002 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 2006 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S160053681202538X/tk5105sup1.cif Supplementary material file. DOI: 10.1107/S160053681202538X/tk5105Isup2.cdx Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681202538X/tk5105Isup3.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ni(C10H8N2)(H2O)4]SO4F(000) = 1584
Mr = 383.02Dx = 1.713 Mg m3
Orthorhombic, PbcaMo Kα radiation, λ = 0.71073 Å
a = 12.3035 (7) ŵ = 1.49 mm1
b = 11.6560 (7) ÅT = 298 K
c = 20.7112 (10) ÅBlock, blue
V = 2970.2 (3) Å30.25 × 0.20 × 0.20 mm
Z = 8
Bruker SMART APEX CCD area detector diffractometer3626 independent reflections
Radiation source: fine-focus sealed tube3024 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.045
Detector resolution: 8 pixels mm-1θmax = 30.5°, θmin = 2.0°
ω and φ scansh = 0→17
Absorption correction: multi-scan (SADABS; Bruker, 2003)k = 0→16
Tmin = 0.707, Tmax = 0.755l = 0→19
11218 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.039Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.092H atoms treated by a mixture of independent and constrained refinement
S = 1.07w = 1/[σ2(Fo2) + (0.0322P)2 + 3.2213P] where P = (Fo2 + 2Fc2)/3
3626 reflections(Δ/σ)max = 0.001
231 parametersΔρmax = 0.58 e Å3
12 restraintsΔρmin = −0.70 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against all reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Ni10.05162 (2)0.72886 (2)0.655841 (16)0.01042 (10)
S1−0.25226 (4)0.98567 (4)0.69683 (3)0.01034 (14)
O1−0.10901 (13)0.73405 (14)0.62681 (9)0.0138 (4)
N10.07768 (16)0.56644 (16)0.61777 (11)0.0128 (4)
C10.0689 (2)0.4662 (2)0.64883 (14)0.0162 (5)
H10.04530.46650.69150.019*
O20.20770 (14)0.72708 (14)0.69286 (9)0.0133 (4)
N20.09637 (16)0.77000 (16)0.56277 (11)0.0134 (4)
C20.0934 (2)0.3618 (2)0.62007 (14)0.0184 (6)
H20.08710.29370.64310.022*
O3−0.00380 (14)0.67614 (14)0.74609 (9)0.0150 (4)
C30.1271 (2)0.3612 (2)0.55698 (14)0.0208 (6)
H30.14400.29230.53660.025*
O40.04198 (14)0.89878 (14)0.68080 (10)0.0170 (4)
C40.1357 (2)0.4641 (2)0.52378 (14)0.0178 (5)
H40.15760.46510.48080.021*
O5−0.25137 (14)0.85952 (13)0.70127 (9)0.0172 (4)
C50.11122 (18)0.56556 (19)0.55584 (13)0.0128 (5)
O6−0.13912 (13)1.02854 (14)0.69611 (8)0.0142 (4)
C60.11779 (18)0.67945 (19)0.52374 (13)0.0133 (5)
O7−0.30835 (14)1.02193 (14)0.63785 (9)0.0157 (4)
C70.1406 (2)0.6931 (2)0.45869 (14)0.0185 (6)
H70.15780.63000.43320.022*
O8−0.30946 (13)1.03373 (13)0.75434 (8)0.0137 (4)
C80.1376 (2)0.8021 (2)0.43219 (14)0.0201 (6)
H80.15080.81300.38840.024*
C90.1145 (2)0.8947 (2)0.47183 (14)0.0214 (6)
H90.11220.96870.45520.026*
C100.0950 (2)0.8751 (2)0.53642 (14)0.0174 (6)
H100.08010.93750.56290.021*
H1A−0.134 (3)0.6650 (17)0.6270 (18)0.048 (11)*
H2A0.233 (3)0.6601 (17)0.7021 (14)0.030 (9)*
H3A−0.0628 (19)0.636 (3)0.7451 (17)0.042 (11)*
H4A0.092 (2)0.937 (3)0.7005 (15)0.040 (10)*
H1B−0.152 (3)0.778 (2)0.6482 (16)0.041 (11)*
H2B0.220 (3)0.773 (2)0.7246 (14)0.048 (12)*
H3B0.046 (3)0.639 (3)0.766 (2)0.071 (15)*
H4B−0.0191 (18)0.934 (3)0.6840 (17)0.039 (10)*
U11U22U33U12U13U23
Ni10.00799 (13)0.01272 (14)0.0105 (3)0.00003 (10)0.00070 (11)−0.00085 (11)
S10.0079 (2)0.0117 (2)0.0114 (4)0.00052 (17)0.0005 (2)−0.0002 (2)
O10.0087 (7)0.0155 (7)0.0173 (12)−0.0007 (6)−0.0004 (7)−0.0022 (7)
N10.0111 (9)0.0163 (9)0.0109 (15)−0.0006 (7)−0.0008 (8)−0.0005 (8)
C10.0152 (11)0.0184 (11)0.0149 (18)−0.0010 (9)−0.0010 (9)0.0009 (9)
O20.0111 (7)0.0148 (7)0.0139 (12)0.0004 (6)−0.0015 (7)−0.0002 (7)
N20.0094 (8)0.0162 (9)0.0146 (14)0.0007 (7)0.0011 (8)−0.0004 (8)
C20.0163 (11)0.0163 (10)0.0227 (19)0.0002 (9)−0.0029 (10)0.0012 (10)
O30.0112 (8)0.0205 (8)0.0132 (12)−0.0009 (6)0.0008 (7)0.0023 (7)
C30.0189 (12)0.0195 (11)0.024 (2)0.0035 (9)−0.0010 (10)−0.0055 (10)
O40.0098 (8)0.0171 (8)0.0241 (13)0.0013 (6)−0.0022 (7)−0.0062 (7)
C40.0171 (11)0.0221 (11)0.0143 (18)0.0030 (9)0.0027 (10)−0.0046 (10)
O50.0198 (9)0.0115 (7)0.0204 (12)0.0015 (6)0.0071 (7)0.0001 (7)
C50.0080 (9)0.0179 (10)0.0126 (17)−0.0005 (8)0.0000 (9)−0.0010 (9)
O60.0083 (7)0.0191 (8)0.0153 (12)−0.0020 (6)0.0005 (6)−0.0008 (7)
C60.0091 (9)0.0172 (10)0.0137 (17)0.0006 (8)0.0020 (8)0.0011 (9)
O70.0159 (8)0.0187 (8)0.0125 (11)0.0025 (6)−0.0041 (7)−0.0019 (7)
C70.0149 (11)0.0250 (11)0.0157 (19)−0.0006 (9)0.0013 (10)−0.0012 (10)
O80.0115 (7)0.0159 (7)0.0137 (12)−0.0003 (6)0.0025 (7)−0.0005 (6)
C80.0160 (11)0.0304 (13)0.0139 (18)−0.0021 (10)0.0033 (10)0.0049 (11)
C90.0161 (11)0.0243 (12)0.024 (2)−0.0006 (9)0.0015 (10)0.0105 (11)
C100.0154 (11)0.0166 (10)0.0201 (19)0.0028 (9)0.0053 (10)0.0027 (10)
Ni1—O42.0504 (17)C2—C31.371 (4)
Ni1—N22.061 (2)C2—H20.9300
Ni1—O12.0667 (17)O3—H3A0.864 (18)
Ni1—O22.0679 (17)O3—H3B0.862 (18)
Ni1—N12.0757 (19)C3—C41.387 (4)
Ni1—O32.0824 (19)C3—H30.9300
S1—O71.4653 (19)O4—H4A0.861 (18)
S1—O51.4732 (16)O4—H4B0.861 (18)
S1—O61.4791 (17)C4—C51.390 (3)
S1—O81.4926 (18)C4—H40.9300
O1—H1A0.862 (18)C5—C61.487 (3)
O1—H1B0.862 (18)C6—C71.386 (4)
N1—C11.338 (3)C7—C81.384 (4)
N1—C51.347 (3)C7—H70.9300
C1—C21.388 (3)C8—C91.386 (4)
C1—H10.9300C8—H80.9300
O2—H2A0.862 (17)C9—C101.378 (4)
O2—H2B0.863 (18)C9—H90.9300
N2—C101.341 (3)C10—H100.9300
N2—C61.355 (3)
O4—Ni1—N291.51 (8)C6—N2—Ni1115.37 (16)
O4—Ni1—O189.41 (7)C3—C2—C1118.7 (2)
N2—Ni1—O188.66 (8)C3—C2—H2120.7
O4—Ni1—O288.28 (7)C1—C2—H2120.7
N2—Ni1—O295.80 (8)Ni1—O3—H3A114 (2)
O1—Ni1—O2175.03 (8)Ni1—O3—H3B111 (3)
O4—Ni1—N1170.30 (8)H3A—O3—H3B109 (3)
N2—Ni1—N179.38 (8)C2—C3—C4119.4 (2)
O1—Ni1—N193.66 (7)C2—C3—H3120.3
O2—Ni1—N189.32 (7)C4—C3—H3120.3
O4—Ni1—O392.28 (8)Ni1—O4—H4A125 (2)
N2—Ni1—O3174.58 (7)Ni1—O4—H4B122 (2)
O1—Ni1—O387.52 (7)H4A—O4—H4B110 (3)
O2—Ni1—O388.18 (7)C3—C4—C5118.9 (3)
N1—Ni1—O397.03 (8)C3—C4—H4120.6
O7—S1—O5110.09 (10)C5—C4—H4120.6
O7—S1—O6109.72 (10)N1—C5—C4121.9 (2)
O5—S1—O6109.32 (10)N1—C5—C6115.8 (2)
O7—S1—O8109.57 (10)C4—C5—C6122.3 (2)
O5—S1—O8109.16 (10)N2—C6—C7122.0 (2)
O6—S1—O8108.96 (10)N2—C6—C5114.7 (2)
Ni1—O1—H1A108 (3)C7—C6—C5123.3 (2)
Ni1—O1—H1B117 (3)C8—C7—C6119.1 (2)
H1A—O1—H1B109 (3)C8—C7—H7120.5
C1—N1—C5118.4 (2)C6—C7—H7120.5
C1—N1—Ni1126.97 (18)C7—C8—C9119.0 (3)
C5—N1—Ni1114.57 (15)C7—C8—H8120.5
N1—C1—C2122.8 (3)C9—C8—H8120.5
N1—C1—H1118.6C10—C9—C8118.8 (2)
C2—C1—H1118.6C10—C9—H9120.6
Ni1—O2—H2A115 (2)C8—C9—H9120.6
Ni1—O2—H2B116 (3)N2—C10—C9123.0 (2)
H2A—O2—H2B110 (3)N2—C10—H10118.5
C10—N2—C6118.1 (2)C9—C10—H10118.5
C10—N2—Ni1126.14 (18)
O4—Ni1—N1—C1158.1 (4)C1—C2—C3—C40.0 (4)
N2—Ni1—N1—C1178.5 (2)C2—C3—C4—C50.8 (4)
O1—Ni1—N1—C1−93.6 (2)C1—N1—C5—C40.5 (3)
O2—Ni1—N1—C182.5 (2)Ni1—N1—C5—C4177.86 (18)
O3—Ni1—N1—C1−5.6 (2)C1—N1—C5—C6179.2 (2)
O4—Ni1—N1—C5−19.0 (6)Ni1—N1—C5—C6−3.5 (2)
N2—Ni1—N1—C51.39 (16)C3—C4—C5—N1−1.1 (4)
O1—Ni1—N1—C589.34 (16)C3—C4—C5—C6−179.7 (2)
O2—Ni1—N1—C5−94.63 (16)C10—N2—C6—C71.7 (3)
O3—Ni1—N1—C5177.28 (16)Ni1—N2—C6—C7174.92 (19)
C5—N1—C1—C20.4 (3)C10—N2—C6—C5−176.5 (2)
Ni1—N1—C1—C2−176.60 (18)Ni1—N2—C6—C5−3.2 (3)
O4—Ni1—N2—C10−9.6 (2)N1—C5—C6—N24.5 (3)
O1—Ni1—N2—C1079.7 (2)C4—C5—C6—N2−176.9 (2)
O2—Ni1—N2—C10−98.1 (2)N1—C5—C6—C7−173.6 (2)
N1—Ni1—N2—C10173.7 (2)C4—C5—C6—C75.0 (4)
O3—Ni1—N2—C10124.8 (7)N2—C6—C7—C8−2.4 (4)
O4—Ni1—N2—C6177.75 (17)C5—C6—C7—C8175.5 (2)
O1—Ni1—N2—C6−92.87 (17)C6—C7—C8—C91.6 (4)
O2—Ni1—N2—C689.33 (17)C7—C8—C9—C10−0.2 (4)
N1—Ni1—N2—C61.11 (16)C6—N2—C10—C9−0.1 (4)
O3—Ni1—N2—C6−47.8 (8)Ni1—N2—C10—C9−172.58 (19)
N1—C1—C2—C3−0.7 (4)C8—C9—C10—N2−0.6 (4)
D—H···AD—HH···AD···AD—H···A
O1—H1B···O50.86 (2)1.90 (2)2.754 (2)173 (3)
O1—H1A···O7i0.86 (2)1.83 (2)2.683 (2)173 (4)
O2—H2B···O5ii0.86 (2)1.87 (2)2.728 (2)174 (3)
O2—H2A···O8iii0.86 (2)1.97 (2)2.800 (2)162 (3)
O3—H3B···O6iii0.86 (2)1.89 (2)2.736 (2)168 (4)
O3—H3A···O8i0.86 (2)1.98 (2)2.840 (2)172 (3)
O4—H4B···O60.86 (2)1.86 (2)2.712 (2)172 (3)
O4—H4A···O8ii0.86 (2)1.90 (2)2.760 (2)174 (3)
C8—H8···O6iv0.932.553.310 (3)139
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O1—H1B⋯O50.86 (2)1.90 (2)2.754 (2)173 (3)
O1—H1A⋯O7i 0.86 (2)1.83 (2)2.683 (2)173 (4)
O2—H2B⋯O5ii 0.86 (2)1.87 (2)2.728 (2)174 (3)
O2—H2A⋯O8iii 0.86 (2)1.97 (2)2.800 (2)162 (3)
O3—H3B⋯O6iii 0.86 (2)1.89 (2)2.736 (2)168 (4)
O3—H3A⋯O8i 0.86 (2)1.98 (2)2.840 (2)172 (3)
O4—H4B⋯O60.86 (2)1.86 (2)2.712 (2)172 (3)
O4—H4A⋯O8ii 0.86 (2)1.90 (2)2.760 (2)174 (3)
C8—H8⋯O6iv 0.932.553.310 (3)139

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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