| Literature DB >> 22798944 |
Halliru Ibrahim1, Muhammad D Bala, Bernard Omondi.
Abstract
In the crystal structure of the title compound, C(11)H(10)N(2)O·H(2)O, the solvent water mol-ecule links the organic mol-ecules through O-H⋯O and O-H⋯N hydrogen bonds, forming chains that run diagonally across the bc face. These chains are connected to adjacent chains through weak C-H⋯O inter-actions, resulting in hydrogen-bonded sheets extending along the b and c axes. The sheets are connected along the a axis through π-π inter-actions, with centroid-centroid distances of 3.7571 (9) and 3.7231 (9) Å.Entities:
Year: 2012 PMID: 22798944 PMCID: PMC3394079 DOI: 10.1107/S1600536812029157
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C11H10N2O·H2O | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 7553 reflections | |
| θ = 2.2–25.0° | |
| µ = 0.10 mm−1 | |
| α = 90.350 (3)° | |
| β = 106.731 (3)° | Block, colourless |
| γ = 99.486 (3)° | 0.58 × 0.39 × 0.14 mm |
| Bruker SMART APEXII CCD diffractometer | 1568 reflections with |
| Graphite monochromator | |
| φ and ω scans | θmax = 25.0°, θmin = 2.2° |
| Absorption correction: multi-scan ( | |
| 6609 measured reflections | |
| 1711 independent reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 1711 reflections | (Δ/σ)max = 0.002 |
| 153 parameters | Δρmax = 0.15 e Å−3 |
| 0 restraints | Δρmin = −0.34 e Å−3 |
| Experimental. Carbon-bound H-atoms were placed in calculated positions [C—H = 0.96 Å for
Me H atoms and 0.93 Å for aromatic H atoms; |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)
are estimated using the full covariance matrix. The cell e.s.d.'s are taken
into account individually in the estimation of e.s.d.'s in distances, angles
and torsion angles; correlations between e.s.d.'s in cell parameters are only
used when they are defined by crystal symmetry. An approximate (isotropic)
treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s.
planes. The following ALERTS were generated. Each ALERT has the format
test-name_ALERT_alert-type_alert-level. Alert level C PLAT029_ALERT_3_C
_diffrn_measured_fraction_theta_full Low ······. 0.971 PLAT911_ALERT_3_C
Missing # FCF Refl Between THmin & STh/ |
| Refinement. Refinement of |
| C1 | 0.3585 (2) | 0.18679 (16) | 0.96056 (14) | 0.0245 (3) | |
| H1A | 0.3397 | 0.0859 | 1.0103 | 0.037* | |
| H1B | 0.2732 | 0.2621 | 0.9808 | 0.037* | |
| H1C | 0.5033 | 0.2395 | 0.9923 | 0.037* | |
| C2 | 0.29495 (19) | 0.14436 (15) | 0.80160 (14) | 0.0195 (3) | |
| C3 | 0.28326 (18) | 0.28277 (15) | 0.70069 (13) | 0.0174 (3) | |
| C4 | 0.21354 (19) | 0.24258 (15) | 0.55292 (14) | 0.0184 (3) | |
| H4 | 0.1746 | 0.1304 | 0.5199 | 0.022* | |
| C5 | 0.20107 (19) | 0.36543 (15) | 0.45475 (13) | 0.0182 (3) | |
| H5 | 0.1554 | 0.3361 | 0.3566 | 0.022* | |
| C6 | 0.25730 (17) | 0.53395 (14) | 0.50336 (13) | 0.0160 (3) | |
| C7 | 0.32455 (19) | 0.57689 (15) | 0.65011 (14) | 0.0204 (3) | |
| H7 | 0.3611 | 0.6892 | 0.6829 | 0.024* | |
| C8 | 0.3369 (2) | 0.45188 (16) | 0.74724 (14) | 0.0208 (3) | |
| H8 | 0.3818 | 0.4813 | 0.8454 | 0.025* | |
| C9 | 0.17884 (19) | 0.63657 (15) | 0.25569 (14) | 0.0195 (3) | |
| C10 | 0.24881 (19) | 0.90217 (15) | 0.30220 (14) | 0.0206 (3) | |
| C11 | 0.28704 (19) | 0.83293 (15) | 0.43105 (14) | 0.0197 (3) | |
| H11 | 0.3339 | 0.8894 | 0.5213 | 0.024* | |
| N1 | 0.24241 (15) | 0.66069 (12) | 0.40191 (11) | 0.0165 (3) | |
| N2 | 0.18116 (16) | 0.77885 (13) | 0.19181 (11) | 0.0210 (3) | |
| O1 | 0.25470 (14) | −0.00186 (10) | 0.75446 (10) | 0.0248 (3) | |
| O1S | 0.04729 (17) | 0.73832 (13) | −0.11171 (11) | 0.0353 (3) | |
| H1D | 0.115 (3) | 0.820 (3) | −0.147 (2) | 0.053 (5)* | |
| H1E | 0.093 (3) | 0.762 (2) | −0.015 (2) | 0.047 (5)* | |
| H9 | 0.137 (2) | 0.5281 (19) | 0.2087 (16) | 0.024 (4)* | |
| H10 | 0.262 (2) | 1.0191 (17) | 0.2805 (14) | 0.017 (3)* |
| C1 | 0.0292 (7) | 0.0211 (6) | 0.0227 (7) | 0.0052 (5) | 0.0064 (6) | 0.0051 (5) |
| C2 | 0.0160 (6) | 0.0193 (6) | 0.0237 (7) | 0.0030 (5) | 0.0067 (5) | 0.0031 (5) |
| C3 | 0.0146 (6) | 0.0177 (6) | 0.0208 (7) | 0.0032 (5) | 0.0061 (5) | 0.0020 (5) |
| C4 | 0.0180 (6) | 0.0135 (6) | 0.0233 (7) | 0.0021 (5) | 0.0058 (5) | −0.0010 (5) |
| C5 | 0.0186 (6) | 0.0180 (6) | 0.0169 (6) | 0.0027 (5) | 0.0039 (5) | −0.0004 (5) |
| C6 | 0.0122 (6) | 0.0169 (6) | 0.0193 (7) | 0.0025 (5) | 0.0054 (5) | 0.0029 (5) |
| C7 | 0.0229 (6) | 0.0132 (6) | 0.0233 (7) | 0.0010 (5) | 0.0053 (5) | −0.0007 (5) |
| C8 | 0.0233 (7) | 0.0206 (6) | 0.0163 (6) | 0.0020 (5) | 0.0036 (5) | −0.0005 (5) |
| C9 | 0.0208 (7) | 0.0177 (6) | 0.0193 (7) | 0.0014 (5) | 0.0057 (5) | 0.0006 (5) |
| C10 | 0.0217 (6) | 0.0152 (6) | 0.0246 (7) | 0.0020 (5) | 0.0069 (5) | 0.0032 (5) |
| C11 | 0.0202 (6) | 0.0145 (6) | 0.0224 (7) | 0.0007 (5) | 0.0043 (5) | −0.0010 (5) |
| N1 | 0.0161 (5) | 0.0138 (5) | 0.0187 (6) | 0.0014 (4) | 0.0047 (4) | 0.0015 (4) |
| N2 | 0.0228 (6) | 0.0189 (5) | 0.0207 (6) | 0.0016 (4) | 0.0063 (4) | 0.0031 (4) |
| O1 | 0.0330 (5) | 0.0163 (5) | 0.0251 (5) | 0.0027 (4) | 0.0094 (4) | 0.0030 (4) |
| O1S | 0.0489 (7) | 0.0281 (5) | 0.0209 (6) | −0.0152 (5) | 0.0102 (5) | −0.0023 (4) |
| C1—C2 | 1.5003 (18) | C7—H7 | 0.93 |
| C1—H1A | 0.96 | C8—H8 | 0.93 |
| C1—H1B | 0.96 | C9—N2 | 1.3109 (16) |
| C1—H1C | 0.96 | C9—N2 | 1.3109 (16) |
| C2—O1 | 1.2240 (15) | C9—N1 | 1.3634 (17) |
| C2—C3 | 1.4896 (17) | C9—H9 | 0.948 (15) |
| C3—C8 | 1.3935 (17) | C10—C11 | 1.3483 (19) |
| C3—C4 | 1.3941 (18) | C10—N2 | 1.3816 (17) |
| C4—C5 | 1.3775 (17) | C10—N2 | 1.3816 (17) |
| C4—H4 | 0.93 | C10—H10 | 0.966 (14) |
| C5—C6 | 1.3941 (17) | C11—N1 | 1.3855 (15) |
| C5—H5 | 0.93 | C11—H11 | 0.93 |
| C6—C7 | 1.3890 (18) | O1S—H1D | 0.87 (2) |
| C6—N1 | 1.4220 (15) | O1S—H1E | 0.91 (2) |
| C7—C8 | 1.3835 (18) | ||
| C2—C1—H1A | 109.5 | C6—C7—H7 | 120.1 |
| C2—C1—H1B | 109.5 | C7—C8—C3 | 121.20 (12) |
| H1A—C1—H1B | 109.5 | C7—C8—H8 | 119.4 |
| C2—C1—H1C | 109.5 | C3—C8—H8 | 119.4 |
| H1A—C1—H1C | 109.5 | N2—C9—N1 | 112.07 (11) |
| H1B—C1—H1C | 109.5 | N2—C9—N1 | 112.07 (11) |
| O1—C2—C3 | 119.93 (11) | N2—C9—H9 | 125.6 (9) |
| O1—C2—C1 | 120.84 (11) | N2—C9—H9 | 125.6 (9) |
| C3—C2—C1 | 119.23 (11) | N1—C9—H9 | 122.3 (9) |
| C8—C3—C4 | 118.11 (11) | C11—C10—N2 | 110.55 (11) |
| C8—C3—C2 | 122.91 (11) | C11—C10—N2 | 110.55 (11) |
| C4—C3—C2 | 118.98 (11) | C11—C10—H10 | 129.4 (8) |
| C5—C4—C3 | 121.44 (11) | N2—C10—H10 | 120.0 (8) |
| C5—C4—H4 | 119.3 | N2—C10—H10 | 120.0 (8) |
| C3—C4—H4 | 119.3 | C10—C11—N1 | 106.12 (11) |
| C4—C5—C6 | 119.63 (11) | C10—C11—H11 | 126.9 |
| C4—C5—H5 | 120.2 | N1—C11—H11 | 126.9 |
| C6—C5—H5 | 120.2 | C9—N1—C11 | 106.12 (10) |
| C7—C6—C5 | 119.90 (11) | C9—N1—C6 | 126.67 (10) |
| C7—C6—N1 | 120.52 (11) | C11—N1—C6 | 127.20 (10) |
| C5—C6—N1 | 119.58 (11) | C9—N2—C10 | 105.14 (10) |
| C8—C7—C6 | 119.72 (11) | H1D—O1S—H1E | 104.5 (17) |
| C8—C7—H7 | 120.1 | ||
| O1—C2—C3—C8 | −176.76 (11) | N2—C9—N1—C11 | 0.29 (14) |
| C1—C2—C3—C8 | 2.59 (18) | N2—C9—N1—C11 | 0.29 (14) |
| O1—C2—C3—C4 | 3.98 (18) | N2—C9—N1—C6 | 179.67 (10) |
| C1—C2—C3—C4 | −176.67 (11) | N2—C9—N1—C6 | 179.67 (10) |
| C8—C3—C4—C5 | 1.18 (18) | C10—C11—N1—C9 | −0.15 (13) |
| C2—C3—C4—C5 | −179.52 (10) | C10—C11—N1—C6 | −179.53 (11) |
| C3—C4—C5—C6 | −0.60 (18) | C7—C6—N1—C9 | −179.88 (11) |
| C4—C5—C6—C7 | −0.27 (18) | C5—C6—N1—C9 | −0.77 (18) |
| C4—C5—C6—N1 | −179.39 (10) | C7—C6—N1—C11 | −0.63 (18) |
| C5—C6—C7—C8 | 0.51 (18) | C5—C6—N1—C11 | 178.48 (11) |
| N1—C6—C7—C8 | 179.62 (11) | N1—C9—N2—N2 | 0.0 (3) |
| C6—C7—C8—C3 | 0.10 (19) | N2—C9—N2—C10 | 0E1 (10) |
| C4—C3—C8—C7 | −0.93 (19) | N1—C9—N2—C10 | −0.30 (14) |
| C2—C3—C8—C7 | 179.80 (11) | C11—C10—N2—N2 | 0.00 (19) |
| N2—C10—C11—N1 | −0.02 (14) | C11—C10—N2—C9 | 0.20 (14) |
| N2—C10—C11—N1 | −0.02 (14) | N2—C10—N2—C9 | 0E1 (8) |
| H··· | ||||
| O1 | 0.87 (2) | 2.00 (2) | 2.8610 (14) | 174.6 (19) |
| O1 | 0.91 (2) | 1.92 (2) | 2.8246 (15) | 172.1 (16) |
| C5—H5···O1 | 0.93 | 2.39 | 3.3034 (16) | 166 |
| C9—H9···O1 | 0.948 (15) | 2.345 (15) | 3.2677 (16) | 164.5 (12) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O1 | 0.87 (2) | 2.00 (2) | 2.8610 (14) | 174.6 (19) |
| O1 | 0.91 (2) | 1.92 (2) | 2.8246 (15) | 172.1 (16) |
| C5—H5⋯O1 | 0.93 | 2.39 | 3.3034 (16) | 166 |
| C9—H9⋯O1 | 0.948 (15) | 2.345 (15) | 3.2677 (16) | 164.5 (12) |
Symmetry codes: (i) ; (ii) .