Literature DB >> 22798936

Diimidazolium phthalate monohydrate.

Chua-Hua Yu1.   

Abstract

In the title compound, 2C(3)H(5)N(2) (+)·C(8)H(4)O(4) (2-)·H(2)O, the cations, anion and water mol-ecule are connected by N-H⋯O and O-H⋯O hydrogen bonds, forming a three-dimensional network.

Entities:  

Year:  2012        PMID: 22798936      PMCID: PMC3394071          DOI: 10.1107/S1600536812028619

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

The title compound was synthesized during a search for ferroelectric materials. For background to ferroelectric organic materials with framework structures, see: Zhang et al. (2009 ▶, 2010 ▶); Zhang & Xiong (2012 ▶). For related structures, see: Yu & Zhu (2012 ▶); Zhu & Yu (2011 ▶).

Experimental

Crystal data

2C3H5N2 +·C8H4O4 2−·H2O M = 320.31 Monoclinic, a = 9.1250 (18) Å b = 12.979 (3) Å c = 13.549 (3) Å β = 103.85 (3)° V = 1558.0 (6) Å3 Z = 4 Mo Kα radiation μ = 0.11 mm−1 T = 293 K 0.32 × 0.28 × 0.26 mm

Data collection

Rigaku SCXmini diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku, 2005 ▶) T min = 0.967, T max = 0.973 15753 measured reflections 3567 independent reflections 2758 reflections with I > 2σ(I) R int = 0.044 3 standard reflections every 180 reflections intensity decay: none

Refinement

R[F 2 > 2σ(F 2)] = 0.058 wR(F 2) = 0.141 S = 1.10 3567 reflections 208 parameters H-atom parameters constrained Δρmax = 0.32 e Å−3 Δρmin = −0.50 e Å−3 Data collection: CrystalClear (Rigaku, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg & Putz, 2005 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812028619/go2058sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812028619/go2058Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812028619/go2058Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
2C3H5N2+·C8H4O42·H2OF(000) = 672
Mr = 320.31Dx = 1.366 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 3567 reflections
a = 9.1250 (18) Åθ = 3.1–27.5°
b = 12.979 (3) ŵ = 0.11 mm1
c = 13.549 (3) ÅT = 293 K
β = 103.85 (3)°Block, colourless
V = 1558.0 (6) Å30.32 × 0.28 × 0.26 mm
Z = 4
Rigaku SCXmini diffractometer2758 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.044
Graphite monochromatorθmax = 27.5°, θmin = 3.1°
ω scansh = −11→11
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005)k = −16→16
Tmin = 0.967, Tmax = 0.973l = −17→17
15753 measured reflections3 standard reflections every 180 reflections
3567 independent reflections intensity decay: none
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.058Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.141H-atom parameters constrained
S = 1.10w = 1/[σ2(Fo2) + (0.0667P)2 + 0.3812P] where P = (Fo2 + 2Fc2)/3
3567 reflections(Δ/σ)max < 0.001
208 parametersΔρmax = 0.32 e Å3
0 restraintsΔρmin = −0.50 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.67631 (14)0.59458 (9)0.53305 (10)0.0375 (3)
O20.92261 (14)0.61977 (10)0.57079 (11)0.0423 (3)
O30.45616 (13)0.66464 (9)0.28714 (10)0.0386 (3)
O40.67947 (15)0.59102 (10)0.30286 (12)0.0466 (4)
C10.66990 (17)0.75577 (12)0.37728 (12)0.0242 (3)
C20.64193 (19)0.85209 (13)0.33196 (13)0.0310 (4)
H20.58090.85750.26650.037*
C30.7038 (2)0.93997 (13)0.38309 (14)0.0385 (4)
H30.68331.00410.35230.046*
C40.7959 (2)0.93247 (13)0.47976 (15)0.0417 (5)
H40.83720.99150.51440.050*
C50.8267 (2)0.83681 (14)0.52503 (13)0.0353 (4)
H50.88980.83190.58990.042*
C60.76452 (17)0.74796 (12)0.47483 (12)0.0254 (3)
C70.79001 (18)0.64612 (13)0.52933 (12)0.0266 (4)
C80.59838 (19)0.66201 (12)0.31870 (12)0.0275 (4)
N10.41475 (17)0.68481 (12)0.53530 (12)0.0390 (4)
H1A0.50800.65590.52680.047*
N20.18863 (17)0.69028 (12)0.55394 (12)0.0375 (4)
H2A0.09400.67030.55520.045*
C90.2907 (2)0.63160 (14)0.52810 (15)0.0385 (4)
H90.27700.56310.50790.046*
C100.2510 (2)0.78435 (16)0.58006 (18)0.0499 (5)
H100.20430.84060.60210.060*
C110.3926 (2)0.78088 (16)0.5680 (2)0.0548 (6)
H110.46250.83440.57990.066*
N30.37146 (18)0.46491 (12)0.23556 (11)0.0375 (4)
H3A0.40300.53390.25210.045*
N40.24322 (18)0.32527 (12)0.20991 (12)0.0403 (4)
H4A0.17100.28200.20700.048*
C120.2391 (2)0.42411 (14)0.23263 (15)0.0398 (4)
H120.15600.45900.24460.048*
C130.3841 (2)0.30217 (16)0.19825 (16)0.0446 (5)
H130.41790.23830.18200.053*
C140.4641 (2)0.39014 (16)0.21490 (16)0.0452 (5)
H140.56450.39830.21270.054*
O1W0.99551 (16)0.57033 (11)0.32839 (11)0.0479 (4)
H1WA0.90200.58410.32500.072*
H1WB1.02100.51310.36600.072*
U11U22U33U12U13U23
O10.0274 (6)0.0290 (6)0.0568 (8)−0.0006 (5)0.0116 (6)0.0092 (6)
O20.0250 (6)0.0430 (8)0.0569 (8)0.0060 (6)0.0058 (6)0.0199 (6)
O30.0273 (7)0.0295 (7)0.0526 (8)−0.0025 (5)−0.0032 (6)−0.0047 (6)
O40.0372 (8)0.0359 (7)0.0664 (9)0.0010 (6)0.0118 (7)−0.0221 (6)
C10.0216 (7)0.0219 (8)0.0291 (8)−0.0012 (6)0.0060 (6)−0.0019 (6)
C20.0316 (9)0.0288 (9)0.0295 (9)0.0003 (7)0.0015 (7)0.0029 (7)
C30.0500 (12)0.0205 (8)0.0423 (10)−0.0005 (8)0.0057 (8)0.0041 (7)
C40.0529 (12)0.0236 (9)0.0434 (11)−0.0073 (8)0.0016 (9)−0.0066 (7)
C50.0380 (10)0.0323 (9)0.0307 (9)−0.0044 (8)−0.0013 (7)−0.0039 (7)
C60.0219 (8)0.0242 (8)0.0299 (8)0.0000 (6)0.0056 (6)0.0003 (6)
C70.0257 (8)0.0252 (8)0.0293 (8)0.0029 (7)0.0075 (6)0.0009 (6)
C80.0265 (8)0.0255 (8)0.0288 (8)−0.0020 (7)0.0037 (6)−0.0015 (6)
N10.0283 (8)0.0405 (9)0.0500 (9)0.0023 (7)0.0129 (7)0.0026 (7)
N20.0290 (8)0.0320 (8)0.0522 (9)−0.0025 (6)0.0113 (7)−0.0003 (7)
C90.0351 (10)0.0295 (9)0.0501 (11)0.0001 (8)0.0083 (8)−0.0045 (8)
C100.0416 (12)0.0293 (10)0.0811 (16)−0.0004 (9)0.0194 (11)−0.0093 (10)
C110.0416 (12)0.0357 (11)0.0872 (17)−0.0119 (9)0.0155 (11)−0.0056 (11)
N30.0434 (9)0.0313 (8)0.0373 (8)−0.0099 (7)0.0088 (7)−0.0018 (6)
N40.0394 (9)0.0317 (8)0.0490 (10)−0.0117 (7)0.0088 (7)−0.0040 (7)
C120.0403 (11)0.0346 (10)0.0458 (11)−0.0065 (8)0.0126 (9)−0.0049 (8)
C130.0446 (11)0.0375 (10)0.0508 (12)0.0022 (9)0.0100 (9)−0.0068 (9)
C140.0340 (10)0.0504 (12)0.0527 (12)−0.0067 (9)0.0131 (9)−0.0013 (10)
O1W0.0393 (8)0.0419 (8)0.0624 (10)0.0004 (6)0.0116 (7)0.0079 (7)
O1—C71.246 (2)N2—C91.314 (2)
O2—C71.253 (2)N2—C101.358 (2)
O3—C81.266 (2)N2—H2A0.9055
O4—C81.232 (2)C9—H90.9300
C1—C21.389 (2)C10—C111.342 (3)
C1—C61.399 (2)C10—H100.9300
C1—C81.513 (2)C11—H110.9300
C2—C31.383 (2)N3—C121.310 (2)
C2—H20.9300N3—C141.360 (3)
C3—C41.380 (3)N3—H3A0.9507
C3—H30.9300N4—C121.322 (2)
C4—C51.384 (3)N4—C131.365 (3)
C4—H40.9300N4—H4A0.8591
C5—C61.389 (2)C12—H120.9300
C5—H50.9300C13—C141.345 (3)
C6—C71.505 (2)C13—H130.9300
N1—C91.309 (2)C14—H140.9300
N1—C111.355 (3)O1W—H1WA0.8623
N1—H1A0.9615O1W—H1WB0.8997
C2—C1—C6119.30 (14)C9—N2—H2A125.4
C2—C1—C8118.78 (14)C10—N2—H2A126.5
C6—C1—C8121.91 (14)N1—C9—N2109.25 (16)
C3—C2—C1120.73 (15)N1—C9—H9125.4
C3—C2—H2119.6N2—C9—H9125.4
C1—C2—H2119.6C11—C10—N2107.09 (18)
C4—C3—C2120.01 (16)C11—C10—H10126.5
C4—C3—H3120.0N2—C10—H10126.5
C2—C3—H3120.0C10—C11—N1107.11 (18)
C3—C4—C5119.80 (16)C10—C11—H11126.4
C3—C4—H4120.1N1—C11—H11126.4
C5—C4—H4120.1C12—N3—C14108.62 (16)
C4—C5—C6120.81 (16)C12—N3—H3A127.8
C4—C5—H5119.6C14—N3—H3A123.5
C6—C5—H5119.6C12—N4—C13108.66 (16)
C5—C6—C1119.34 (15)C12—N4—H4A125.5
C5—C6—C7119.47 (14)C13—N4—H4A125.7
C1—C6—C7121.02 (14)N3—C12—N4108.79 (18)
O1—C7—O2124.02 (15)N3—C12—H12125.6
O1—C7—C6117.34 (14)N4—C12—H12125.6
O2—C7—C6118.61 (14)C14—C13—N4106.43 (18)
O4—C8—O3124.83 (15)C14—C13—H13126.8
O4—C8—C1119.42 (15)N4—C13—H13126.8
O3—C8—C1115.72 (14)C13—C14—N3107.50 (18)
C9—N1—C11108.42 (17)C13—C14—H14126.2
C9—N1—H1A124.0N3—C14—H14126.2
C11—N1—H1A127.1H1WA—O1W—H1WB108.6
C9—N2—C10108.12 (16)
C6—C1—C2—C3−1.4 (3)C2—C1—C8—O4122.83 (18)
C8—C1—C2—C3179.38 (16)C6—C1—C8—O4−56.3 (2)
C1—C2—C3—C40.8 (3)C2—C1—C8—O3−55.5 (2)
C2—C3—C4—C50.3 (3)C6—C1—C8—O3125.37 (17)
C3—C4—C5—C6−0.7 (3)C11—N1—C9—N20.7 (2)
C4—C5—C6—C10.1 (3)C10—N2—C9—N1−0.9 (2)
C4—C5—C6—C7−175.09 (17)C9—N2—C10—C110.7 (3)
C2—C1—C6—C51.0 (2)N2—C10—C11—N1−0.3 (3)
C8—C1—C6—C5−179.85 (16)C9—N1—C11—C10−0.2 (3)
C2—C1—C6—C7176.10 (15)C14—N3—C12—N4−0.5 (2)
C8—C1—C6—C7−4.7 (2)C13—N4—C12—N30.2 (2)
C5—C6—C7—O1125.27 (18)C12—N4—C13—C140.1 (2)
C1—C6—C7—O1−49.8 (2)N4—C13—C14—N3−0.4 (2)
C5—C6—C7—O2−52.5 (2)C12—N3—C14—C130.6 (2)
C1—C6—C7—O2132.45 (17)
D—H···AD—HH···AD···AD—H···A
N1—H1A···O10.961.712.665 (2)170
N2—H2A···O2i0.911.752.655 (2)172
N3—H3A···O30.951.802.747 (2)177
N3—H3A···O40.952.563.191 (2)124
N4—H4A···O3ii0.861.932.774 (2)168
O1W—H1WA···O40.861.982.834 (2)170
O1W—H1WB···O2iii0.901.942.8326 (19)172
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1A⋯O10.961.712.665 (2)170
N2—H2A⋯O2i 0.911.752.655 (2)172
N3—H3A⋯O30.951.802.747 (2)177
N3—H3A⋯O40.952.563.191 (2)124
N4—H4A⋯O3ii 0.861.932.774 (2)168
O1W—H1WA⋯O40.861.982.834 (2)170
O1W—H1WB⋯O2iii 0.901.942.8326 (19)172

Symmetry codes: (i) ; (ii) ; (iii) .

  6 in total

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Journal:  J Am Chem Soc       Date:  2010-06-02       Impact factor: 15.419

2.  Ferroelectric metal-organic frameworks.

Authors:  Wen Zhang; Ren-Gen Xiong
Journal:  Chem Rev       Date:  2011-09-23       Impact factor: 60.622

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  New ferroelectrics based on divalent metal ion alum.

Authors:  Wen Zhang; Li-Zhuang Chen; Ren-Gen Xiong; Takayoshi Nakamura; Songping D Huang
Journal:  J Am Chem Soc       Date:  2009-09-09       Impact factor: 15.419

5.  2-Ethyl-imidazolium terephthalate.

Authors:  Run-Qiang Zhu; Chun-Hua Yu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-09-30

6.  1H-Pyrazol-2-ium hydrogen oxalate.

Authors:  Chun-Hua Yu; Run-Qiang Zhu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-05-26
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1.  Structural characterization of two tetra-chlorido-zincate salts of 4-carb-oxy-1H-imidazol-3-ium: a salt hydrate and a co-crystal salt hydrate.

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  1 in total

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