Literature DB >> 22719665

1H-Pyrazol-2-ium hydrogen oxalate.

Chun-Hua Yu1, Run-Qiang Zhu.   

Abstract

In the title compound, C(3)H(5)N(2) (+)·C(2)HO(4) (-), the anions form centrosymmetric dimers through cyclic O-H⋯O hydrogen-bonding associations [graph set R(2) (2)(10)]. These dimers are then linked through a cyclic R(4) (2)(10) N-H⋯O hydrogen-bonding association involving two cations and the carboxyl O-atom acceptors of separate anions, giving chain structures extending across the (111) plane.

Entities:  

Year:  2012        PMID: 22719665      PMCID: PMC3379467          DOI: 10.1107/S1600536812023136

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to ferroelectric organic frameworks, see: Fu et al. (2009 ▶); Ye et al. (2006 ▶); Zhang et al. (2008 ▶, 2010 ▶). For graph-set analysis, see: Etter et al. (1990 ▶).

Experimental

Crystal data

C3H5N2 +·C2HO4 M = 158.12 Triclinic, a = 3.7286 (7) Å b = 9.836 (2) Å c = 10.487 (2) Å α = 117.35 (3)° β = 97.01 (3)° γ = 93.65 (3)° V = 335.92 (14) Å3 Z = 2 Mo Kα radiation μ = 0.14 mm−1 T = 293 K 0.26 × 0.22 × 0.14 mm

Data collection

Rigaku SCXmini CCD diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku, 2005 ▶) T min = 0.965, T max = 0.993 3484 measured reflections 1527 independent reflections 702 reflections with I > 2σ(I) R int = 0.063

Refinement

R[F 2 > 2σ(F 2)] = 0.095 wR(F 2) = 0.285 S = 1.07 1527 reflections 101 parameters H-atom parameters constrained Δρmax = 0.48 e Å−3 Δρmin = −0.29 e Å−3 Data collection: CrystalClear (Rigaku, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg & Putz, 2005 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812023136/zs2209sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812023136/zs2209Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812023136/zs2209Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C3H5N2+·C2HO4Z = 2
Mr = 158.12F(000) = 164
Triclinic, P1Dx = 1.563 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 3.7286 (7) ÅCell parameters from 1527 reflections
b = 9.836 (2) Åθ = 2.4–27.5°
c = 10.487 (2) ŵ = 0.14 mm1
α = 117.35 (3)°T = 293 K
β = 97.01 (3)°Sheet, colourless
γ = 93.65 (3)°0.26 × 0.22 × 0.14 mm
V = 335.92 (14) Å3
Rigaku SCXmini CCD diffractometer1527 independent reflections
Radiation source: fine-focus sealed tube702 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.063
CCD_Profile_fitting scansθmax = 27.5°, θmin = 3.9°
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005)h = −4→4
Tmin = 0.965, Tmax = 0.993k = −12→12
3484 measured reflectionsl = −13→13
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.095Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.285H-atom parameters constrained
S = 1.07w = 1/[σ2(Fo2) + (0.1349P)2 + 0.0952P] where P = (Fo2 + 2Fc2)/3
1527 reflections(Δ/σ)max < 0.001
101 parametersΔρmax = 0.48 e Å3
0 restraintsΔρmin = −0.29 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N11.0872 (11)0.0136 (5)0.3057 (4)0.0416 (11)
H1A1.1595−0.05850.32300.050*
N21.1523 (11)0.1643 (5)0.3992 (4)0.0412 (11)
H2A1.27290.20540.48650.049*
C10.9992 (15)0.2395 (6)0.3352 (6)0.0493 (15)
H11.00470.34610.37730.059*
C20.8307 (15)0.1355 (7)0.1967 (6)0.0505 (15)
H20.70200.15670.12770.061*
C30.8931 (15)−0.0076 (7)0.1818 (6)0.0477 (14)
H30.8131−0.10210.09930.057*
O10.3997 (10)0.8001 (4)0.3600 (3)0.0475 (10)
O20.6353 (11)0.5351 (4)0.3418 (4)0.0577 (12)
O30.0807 (11)0.6588 (4)0.1355 (4)0.0581 (11)
O40.3270 (11)0.4012 (4)0.1179 (4)0.0554 (11)
H40.19050.41870.06120.083*
C40.2907 (14)0.6762 (6)0.2446 (5)0.0402 (13)
C50.4374 (14)0.5304 (6)0.2400 (5)0.0425 (13)
U11U22U33U12U13U23
N10.049 (3)0.033 (2)0.041 (2)0.0045 (19)−0.0029 (19)0.019 (2)
N20.048 (3)0.034 (2)0.031 (2)0.005 (2)−0.0023 (19)0.0087 (19)
C10.053 (3)0.045 (3)0.056 (4)0.011 (3)0.006 (3)0.029 (3)
C20.053 (4)0.052 (4)0.048 (3)0.010 (3)−0.002 (3)0.027 (3)
C30.047 (3)0.042 (3)0.041 (3)0.004 (2)−0.006 (2)0.011 (3)
O10.062 (2)0.033 (2)0.037 (2)0.0087 (17)−0.0074 (17)0.0110 (18)
O20.076 (3)0.043 (2)0.045 (2)0.0122 (19)−0.0127 (19)0.018 (2)
O30.077 (3)0.042 (2)0.044 (2)0.0123 (19)−0.0126 (19)0.0155 (19)
O40.075 (3)0.032 (2)0.045 (2)0.0098 (19)−0.0082 (19)0.0113 (19)
C40.047 (3)0.032 (3)0.035 (3)0.005 (2)0.005 (2)0.011 (2)
C50.050 (3)0.033 (3)0.039 (3)0.003 (2)0.004 (3)0.013 (3)
N1—C31.325 (6)C2—H20.9300
N1—N21.333 (5)C3—H30.9300
N1—H1A0.8601O1—C41.256 (6)
N2—C11.319 (6)O2—C51.202 (6)
N2—H2A0.8600O3—C41.239 (6)
C1—C21.372 (7)O4—C51.317 (6)
C1—H10.9300O4—H40.8200
C2—C31.380 (8)C4—C51.549 (7)
C3—N1—N2109.3 (4)C3—C2—H2127.4
C3—N1—H1A125.3N1—C3—C2108.0 (5)
N2—N1—H1A125.4N1—C3—H3126.0
C1—N2—N1108.4 (4)C2—C3—H3126.0
C1—N2—H2A125.8C5—O4—H4109.5
N1—N2—H2A125.8O3—C4—O1127.0 (5)
N2—C1—C2109.1 (5)O3—C4—C5117.3 (4)
N2—C1—H1125.4O1—C4—C5115.7 (4)
C2—C1—H1125.4O2—C5—O4122.4 (5)
C1—C2—C3105.2 (5)O2—C5—C4122.1 (5)
C1—C2—H2127.4O4—C5—C4115.4 (4)
C3—N1—N2—C10.1 (6)O3—C4—C5—O2−178.2 (5)
N1—N2—C1—C20.0 (6)O1—C4—C5—O21.9 (8)
N2—C1—C2—C30.0 (6)O3—C4—C5—O41.0 (7)
N2—N1—C3—C2−0.1 (6)O1—C4—C5—O4−178.9 (4)
C1—C2—C3—N10.1 (6)
D—H···AD—HH···AD···AD—H···A
N1—H1A···O1i0.861.862.709 (5)170
N2—H2A···O1ii0.861.922.715 (5)153
O4—H4···O3iii0.821.952.679 (5)147
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1A⋯O1i0.861.862.709 (5)170
N2—H2A⋯O1ii0.861.922.715 (5)153
O4—H4⋯O3iii0.821.952.679 (5)147

Symmetry codes: (i) ; (ii) ; (iii) .

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4.  Graph-set analysis of hydrogen-bond patterns in organic crystals.

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5.  3D framework containing Cu4Br4 cubane as connecting node with strong ferroelectricity.

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