| Literature DB >> 22798897 |
Ross S Robinson1, Siphamandla Sithebe, Matthew P Akerman.
Abstract
The title compound, C(13)H(13)BN(2)O, is one in a series of 1,3,2-benzodiaza-boroles featuring a 2-meth-oxy-phenyl substitution at the 2-position in the nitro-gen-boron heterocyle. The dihedral angle between the mean planes of the benzodiaza-borole and 2-meth-oxy-phenyl ring systems is 21.5 (1)°. There is an inter-molecular hydrogen bond between one of the NH groups and the meth-oxy O atom. This hydrogen bond leads to an infinite hydrogen-bonded chain colinear with the a axis.Entities:
Year: 2012 PMID: 22798897 PMCID: PMC3394032 DOI: 10.1107/S1600536812028437
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C13H13BN2O | |
| Orthorhombic, | Mo |
| Hall symbol: P 2ac 2ab | Cell parameters from 1939 reflections |
| θ = 3.2–32.1° | |
| µ = 0.08 mm−1 | |
| Needle, colourless | |
| 0.50 × 0.40 × 0.40 mm |
| Oxford Diffraction Xcalibur 2 CCD diffractometer | 2125 independent reflections |
| Radiation source: fine-focus sealed tube | 1939 reflections with |
| Graphite monochromator | |
| ω scans at fixed θ angles | θmax = 32.1°, θmin = 3.2° |
| Absorption correction: multi-scan (Blessing, 1995) | |
| 11586 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 2125 reflections | Δρmax = 0.32 e Å−3 |
| 164 parameters | Δρmin = −0.20 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.058 (6) |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of |
| O001 | 0.68887 (13) | 0.34747 (7) | 1.11670 (7) | 0.0238 (2) | |
| N2 | 0.86812 (15) | 0.17066 (8) | 0.71418 (8) | 0.0184 (2) | |
| N1 | 0.69146 (14) | 0.27984 (8) | 0.61068 (8) | 0.0187 (2) | |
| C8 | 0.85853 (16) | 0.12575 (9) | 0.61012 (9) | 0.0171 (2) | |
| C2 | 0.73726 (16) | 0.30830 (10) | 0.92377 (10) | 0.0179 (2) | |
| H2 | 0.7848 | 0.2380 | 0.9388 | 0.022* | |
| C6 | 0.65474 (16) | 0.44957 (10) | 0.79625 (10) | 0.0217 (2) | |
| H6 | 0.6449 | 0.4756 | 0.7238 | 0.026* | |
| C11 | 0.78716 (17) | 0.07371 (10) | 0.39528 (10) | 0.0208 (2) | |
| H11 | 0.7634 | 0.0544 | 0.3219 | 0.025* | |
| C13 | 0.74943 (16) | 0.19384 (9) | 0.54613 (9) | 0.0168 (2) | |
| C12 | 0.71345 (16) | 0.16880 (10) | 0.43846 (9) | 0.0194 (2) | |
| H12 | 0.6407 | 0.2151 | 0.3954 | 0.023* | |
| C1 | 0.72155 (16) | 0.34445 (10) | 0.81557 (9) | 0.0181 (2) | |
| C9 | 0.93295 (17) | 0.03188 (10) | 0.56632 (11) | 0.0203 (2) | |
| H9 | 1.0075 | −0.0139 | 0.6087 | 0.024* | |
| C4 | 0.61570 (17) | 0.47951 (10) | 0.98828 (10) | 0.0228 (3) | |
| H4 | 0.5789 | 0.5249 | 1.0467 | 0.027* | |
| C3 | 0.68309 (17) | 0.37557 (10) | 1.00871 (10) | 0.0193 (2) | |
| C5 | 0.60273 (18) | 0.51624 (10) | 0.88201 (11) | 0.0241 (3) | |
| H5 | 0.5580 | 0.5874 | 0.8677 | 0.029* | |
| C10 | 0.89523 (17) | 0.00661 (10) | 0.45839 (10) | 0.0213 (2) | |
| H10 | 0.9442 | −0.0577 | 0.4272 | 0.026* | |
| C7 | 0.7662 (2) | 0.24408 (11) | 1.14365 (11) | 0.0296 (3) | |
| H7A | 0.6947 | 0.1852 | 1.1122 | 0.044* | |
| H7B | 0.7700 | 0.2358 | 1.2228 | 0.044* | |
| H7C | 0.8868 | 0.2405 | 1.1144 | 0.044* | |
| B1 | 0.76235 (18) | 0.26817 (10) | 0.71788 (10) | 0.0179 (2) | |
| H102 | 0.940 (3) | 0.1411 (15) | 0.7630 (17) | 0.042 (5)* | |
| H101 | 0.625 (3) | 0.3271 (17) | 0.5846 (18) | 0.050 (6)* |
| O001 | 0.0320 (5) | 0.0242 (4) | 0.0153 (4) | 0.0015 (4) | 0.0037 (4) | −0.0013 (3) |
| N2 | 0.0218 (5) | 0.0184 (4) | 0.0150 (4) | 0.0016 (4) | −0.0021 (4) | 0.0006 (3) |
| N1 | 0.0233 (5) | 0.0172 (4) | 0.0156 (4) | 0.0040 (4) | −0.0009 (4) | 0.0001 (4) |
| C8 | 0.0195 (5) | 0.0166 (5) | 0.0152 (5) | −0.0009 (4) | 0.0005 (4) | 0.0018 (4) |
| C2 | 0.0197 (5) | 0.0175 (5) | 0.0166 (5) | −0.0002 (4) | 0.0004 (4) | −0.0011 (4) |
| C6 | 0.0237 (6) | 0.0211 (5) | 0.0202 (5) | 0.0015 (5) | −0.0015 (5) | 0.0007 (4) |
| C11 | 0.0239 (6) | 0.0214 (5) | 0.0172 (5) | −0.0029 (5) | 0.0019 (5) | −0.0017 (4) |
| C13 | 0.0196 (5) | 0.0158 (4) | 0.0150 (5) | 0.0004 (4) | 0.0013 (4) | 0.0009 (4) |
| C12 | 0.0224 (5) | 0.0207 (5) | 0.0151 (5) | 0.0000 (4) | −0.0003 (4) | 0.0006 (4) |
| C1 | 0.0188 (5) | 0.0185 (5) | 0.0170 (5) | −0.0006 (4) | −0.0008 (4) | −0.0006 (4) |
| C9 | 0.0219 (5) | 0.0182 (5) | 0.0207 (5) | 0.0018 (4) | 0.0015 (5) | 0.0018 (4) |
| C4 | 0.0243 (6) | 0.0220 (6) | 0.0221 (6) | 0.0024 (5) | 0.0021 (5) | −0.0036 (4) |
| C3 | 0.0202 (5) | 0.0210 (5) | 0.0166 (5) | −0.0022 (4) | 0.0010 (4) | −0.0020 (4) |
| C5 | 0.0265 (6) | 0.0194 (5) | 0.0265 (6) | 0.0047 (5) | −0.0011 (5) | −0.0010 (5) |
| C10 | 0.0242 (6) | 0.0180 (5) | 0.0219 (5) | 0.0004 (5) | 0.0041 (5) | −0.0015 (4) |
| C7 | 0.0382 (7) | 0.0313 (7) | 0.0195 (5) | 0.0066 (6) | 0.0031 (5) | 0.0052 (5) |
| B1 | 0.0202 (5) | 0.0178 (5) | 0.0157 (5) | −0.0005 (5) | 0.0001 (5) | 0.0003 (4) |
| O001—C3 | 1.3735 (15) | C11—C10 | 1.3937 (18) |
| O001—C7 | 1.4316 (17) | C11—C12 | 1.3945 (17) |
| N2—C8 | 1.3954 (15) | C11—H11 | 0.9500 |
| N2—B1 | 1.4359 (17) | C13—C12 | 1.3870 (16) |
| N2—H102 | 0.89 (2) | C12—H12 | 0.9500 |
| N1—C13 | 1.3888 (15) | C1—B1 | 1.5527 (18) |
| N1—B1 | 1.4309 (17) | C9—C10 | 1.3933 (19) |
| N1—H101 | 0.83 (2) | C9—H9 | 0.9500 |
| C8—C9 | 1.3872 (17) | C4—C5 | 1.3864 (19) |
| C8—C13 | 1.4115 (16) | C4—C3 | 1.3921 (18) |
| C2—C3 | 1.3918 (16) | C4—H4 | 0.9500 |
| C2—C1 | 1.4081 (17) | C5—H5 | 0.9500 |
| C2—H2 | 0.9500 | C10—H10 | 0.9500 |
| C6—C5 | 1.3903 (18) | C7—H7A | 0.9800 |
| C6—C1 | 1.4013 (17) | C7—H7B | 0.9800 |
| C6—H6 | 0.9500 | C7—H7C | 0.9800 |
| C3—O001—C7 | 117.27 (10) | C6—C1—B1 | 119.42 (11) |
| C8—N2—B1 | 109.10 (10) | C2—C1—B1 | 121.80 (11) |
| C8—N2—H102 | 119.5 (12) | C8—C9—C10 | 118.12 (12) |
| B1—N2—H102 | 131.1 (12) | C8—C9—H9 | 120.9 |
| C13—N1—B1 | 109.52 (10) | C10—C9—H9 | 120.9 |
| C13—N1—H101 | 119.8 (15) | C5—C4—C3 | 119.48 (12) |
| B1—N1—H101 | 130.7 (15) | C5—C4—H4 | 120.3 |
| C9—C8—N2 | 131.41 (11) | C3—C4—H4 | 120.3 |
| C9—C8—C13 | 120.51 (11) | O001—C3—C2 | 124.73 (11) |
| N2—C8—C13 | 108.07 (10) | O001—C3—C4 | 114.51 (11) |
| C3—C2—C1 | 120.01 (11) | C2—C3—C4 | 120.76 (12) |
| C3—C2—H2 | 120.0 | C4—C5—C6 | 120.41 (12) |
| C1—C2—H2 | 120.0 | C4—C5—H5 | 119.8 |
| C5—C6—C1 | 120.72 (12) | C6—C5—H5 | 119.8 |
| C5—C6—H6 | 119.6 | C9—C10—C11 | 121.36 (12) |
| C1—C6—H6 | 119.6 | C9—C10—H10 | 119.3 |
| C10—C11—C12 | 120.81 (12) | C11—C10—H10 | 119.3 |
| C10—C11—H11 | 119.6 | O001—C7—H7A | 109.5 |
| C12—C11—H11 | 119.6 | O001—C7—H7B | 109.5 |
| C12—C13—N1 | 130.70 (11) | H7A—C7—H7B | 109.5 |
| C12—C13—C8 | 121.14 (11) | O001—C7—H7C | 109.5 |
| N1—C13—C8 | 108.15 (10) | H7A—C7—H7C | 109.5 |
| C13—C12—C11 | 118.05 (12) | H7B—C7—H7C | 109.5 |
| C13—C12—H12 | 121.0 | N1—B1—N2 | 105.16 (10) |
| C11—C12—H12 | 121.0 | N1—B1—C1 | 125.44 (11) |
| C6—C1—C2 | 118.61 (11) | N2—B1—C1 | 129.33 (11) |
| B1—N2—C8—C9 | −178.52 (13) | C7—O001—C3—C4 | −176.53 (12) |
| B1—N2—C8—C13 | 0.68 (13) | C1—C2—C3—O001 | 178.47 (12) |
| B1—N1—C13—C12 | 178.50 (13) | C1—C2—C3—C4 | −1.02 (18) |
| B1—N1—C13—C8 | −0.17 (14) | C5—C4—C3—O001 | −179.61 (12) |
| C9—C8—C13—C12 | 0.17 (18) | C5—C4—C3—C2 | −0.07 (19) |
| N2—C8—C13—C12 | −179.14 (11) | C3—C4—C5—C6 | 0.7 (2) |
| C9—C8—C13—N1 | 178.99 (10) | C1—C6—C5—C4 | −0.2 (2) |
| N2—C8—C13—N1 | −0.32 (13) | C8—C9—C10—C11 | 0.53 (18) |
| N1—C13—C12—C11 | −178.02 (12) | C12—C11—C10—C9 | 0.14 (19) |
| C8—C13—C12—C11 | 0.50 (18) | C13—N1—B1—N2 | 0.57 (13) |
| C10—C11—C12—C13 | −0.65 (18) | C13—N1—B1—C1 | −176.89 (11) |
| C5—C6—C1—C2 | −0.88 (19) | C8—N2—B1—N1 | −0.76 (13) |
| C5—C6—C1—B1 | 174.46 (12) | C8—N2—B1—C1 | 176.55 (12) |
| C3—C2—C1—C6 | 1.48 (18) | C6—C1—B1—N1 | −19.86 (19) |
| C3—C2—C1—B1 | −173.75 (12) | C2—C1—B1—N1 | 155.33 (12) |
| N2—C8—C9—C10 | 178.44 (12) | C6—C1—B1—N2 | 163.32 (12) |
| C13—C8—C9—C10 | −0.68 (17) | C2—C1—B1—N2 | −21.5 (2) |
| C7—O001—C3—C2 | 3.95 (18) |
| H··· | ||||
| N2—H102···O001i | 0.89 (2) | 2.40 (2) | 3.201 (2) | 151 (2) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N2—H102⋯O001i | 0.89 (2) | 2.40 (2) | 3.201 (2) | 151 (2) |
Symmetry code: (i) .