Literature DB >> 22090926

2-(4-Chloro-phen-yl)naphtho-[1,8-de][1,3,2]diaza-borinane.

Matthew P Akerman1, Ross S Robinson, Cathryn A Slabber.   

Abstract

The title compound, C(16)H(12)BClN(2), is one in a series of diaza-borinanes, derived from 1,8-diaminona-phthalene, featuring substitution at the 1, 2 and 3 positions in the nitro-gen-boron heterocycle. The structure deviates from planarity, the torsion angle subtended by the p-chloro-phenyl ring relative to the nitro-gen-boron heterocycle being -44-.3(3)°. The mol-ecules form infinite chains with strong inter-actions between the vacant pz orbital of the B atom and the π-system of an adjacent mol-ecule. The distance between the B atom and the 10-atom centroid of an adjacent naphthalene ring is 3.381 (4) Å. One N-H H atom is weakly hydrogen bonded to the Cl atom of an adjacent mol-ecule. This combination of inter-molecular inter-actions leads to the formation of an infinite two-dimensional network perpendic-ular to the c axis.

Entities:  

Year:  2011        PMID: 22090926      PMCID: PMC3212269          DOI: 10.1107/S1600536811025487

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis of related compounds, see: Letsinger & Hamilton (1958 ▶); Pailer & Fenzl (1961 ▶); Kaupp et al. (2003 ▶); Slabber 2011 ▶. For single-crystal X-ray structures and lumin­escence studies of related compounds, see: Weber, et al. (2009 ▶).

Experimental

Crystal data

C16H12BClN2 M = 278.54 Monoclinic, a = 4.7165 (2) Å b = 10.2815 (4) Å c = 13.5711 (6) Å β = 96.555 (4)° V = 653.79 (5) Å3 Z = 2 Mo Kα radiation μ = 0.28 mm−1 T = 296 K 0.50 × 0.15 × 0.07 mm

Data collection

Oxford Diffraction Xcalibur 2 CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2003 ▶) T min = 0.896, T max = 0.981 4902 measured reflections 2286 independent reflections 2011 reflections with I > 2σ(I) R int = 0.027

Refinement

R[F 2 > 2σ(F 2)] = 0.039 wR(F 2) = 0.098 S = 1.00 2286 reflections 189 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.15 e Å−3 Δρmin = −0.25 e Å−3 Absolute structure: Flack (1983 ▶), 924 Friedel pairs Flack parameter: 0.05 (7) Data collection: CrysAlis CCD (Oxford Diffraction, 2008 ▶); cell refinement: CrysAlis CCD; data reduction: CrysAlis RED (Oxford Diffraction, 2008 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: WinGX (Farrugia, 1999 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536811025487/om2441sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536811025487/om2441Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811025487/om2441Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H12BClN2F(000) = 288
Mr = 278.54Dx = 1.415 Mg m3
Monoclinic, P21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ybCell parameters from 2982 reflections
a = 4.7165 (2) Åθ = 3.6–32.0°
b = 10.2815 (4) ŵ = 0.28 mm1
c = 13.5711 (6) ÅT = 296 K
β = 96.555 (4)°Plate, colourless
V = 653.79 (5) Å30.50 × 0.15 × 0.07 mm
Z = 2
Oxford Diffraction Xcalibur 2 CCD diffractometer2286 independent reflections
Radiation source: fine-focus sealed tube2011 reflections with I > 2σ(I)
graphiteRint = 0.027
Detector resolution: 8.4190 pixels mm-1θmax = 26.1°, θmin = 3.6°
ω scansh = −5→5
Absorption correction: multi-scan (SADABS; Sheldrick, 2003)k = −12→11
Tmin = 0.896, Tmax = 0.981l = −16→16
4902 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.039H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.098w = 1/[σ2(Fo2) + (0.0669P)2] where P = (Fo2 + 2Fc2)/3
S = 1.00(Δ/σ)max < 0.001
2286 reflectionsΔρmax = 0.15 e Å3
189 parametersΔρmin = −0.25 e Å3
1 restraintAbsolute structure: Flack (1983), 924 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: 0.05 (7)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl−1.03675 (12)0.41269 (9)0.42497 (4)0.0546 (2)
N1−0.1813 (4)0.7869 (2)0.15026 (15)0.0391 (4)
H1−0.257 (5)0.732 (3)0.1114 (18)0.048 (8)*
N2−0.1196 (4)0.9013 (2)0.30427 (13)0.0398 (4)
H2−0.134 (5)0.911 (3)0.3607 (17)0.047 (7)*
C10.0738 (5)0.9863 (2)0.26954 (16)0.0362 (5)
C20.2031 (5)1.0847 (2)0.32771 (18)0.0462 (6)
H2A0.16241.09520.39270.055*
C30.3950 (6)1.1682 (2)0.28863 (19)0.0498 (6)
H30.47821.23540.32780.060*
C40.4629 (5)1.1536 (2)0.19447 (19)0.0479 (6)
H40.59381.20970.17060.057*
C50.3366 (5)1.0540 (2)0.13264 (16)0.0387 (5)
C60.4036 (5)1.0340 (2)0.03481 (17)0.0447 (5)
H60.53461.08790.00870.054*
C70.2761 (5)0.9356 (3)−0.02132 (16)0.0489 (6)
H70.32190.9238−0.08560.059*
C80.0804 (5)0.8527 (2)0.01465 (17)0.0463 (6)
H8−0.00390.7867−0.02540.056*
C90.0105 (4)0.8681 (2)0.11029 (16)0.0359 (5)
C100.1391 (4)0.9690 (2)0.17085 (16)0.0350 (5)
C11−0.4634 (5)0.7024 (2)0.29241 (16)0.0358 (5)
C12−0.6037 (5)0.6040 (2)0.23650 (17)0.0440 (6)
H11−0.57710.59720.16980.053*
C13−0.7810 (5)0.5156 (2)0.27541 (17)0.0455 (6)
H12−0.87250.45100.23570.055*
C14−0.8199 (4)0.5247 (2)0.37392 (17)0.0389 (5)
C15−0.6900 (5)0.6218 (3)0.43220 (17)0.0471 (6)
H14−0.72050.62870.49850.057*
C16−0.5137 (5)0.7092 (3)0.39146 (17)0.0485 (6)
H15−0.42600.77460.43140.058*
B−0.2545 (5)0.7993 (3)0.24819 (18)0.0346 (5)
U11U22U33U12U13U23
Cl0.0573 (3)0.0516 (3)0.0563 (3)−0.0125 (3)0.0131 (2)0.0070 (3)
N10.0428 (10)0.0405 (11)0.0344 (10)−0.0057 (9)0.0062 (8)−0.0030 (9)
N20.0443 (9)0.0446 (11)0.0319 (9)−0.0039 (9)0.0107 (7)−0.0019 (11)
C10.0350 (10)0.0339 (12)0.0398 (11)0.0027 (9)0.0046 (9)0.0023 (9)
C20.0519 (14)0.0451 (14)0.0420 (13)−0.0015 (11)0.0071 (11)−0.0053 (11)
C30.0554 (15)0.0415 (15)0.0511 (16)−0.0086 (11)0.0005 (12)−0.0048 (11)
C40.0506 (14)0.0385 (14)0.0547 (15)−0.0025 (11)0.0065 (11)0.0089 (11)
C50.0360 (11)0.0359 (12)0.0437 (12)0.0038 (9)0.0019 (9)0.0091 (10)
C60.0490 (13)0.0469 (13)0.0395 (13)0.0008 (11)0.0109 (10)0.0118 (11)
C70.0551 (13)0.0576 (18)0.0356 (11)0.0042 (11)0.0123 (10)0.0064 (11)
C80.0534 (14)0.0521 (14)0.0342 (12)−0.0029 (11)0.0087 (10)−0.0059 (11)
C90.0336 (10)0.0392 (12)0.0353 (11)0.0029 (8)0.0053 (8)0.0033 (9)
C100.0343 (10)0.0342 (11)0.0361 (11)0.0072 (9)0.0020 (9)0.0033 (9)
C110.0354 (11)0.0367 (12)0.0354 (11)0.0040 (9)0.0051 (8)0.0037 (9)
C120.0521 (14)0.0473 (15)0.0337 (12)−0.0039 (11)0.0094 (11)−0.0010 (10)
C130.0524 (13)0.0437 (14)0.0397 (13)−0.0071 (11)0.0023 (10)−0.0035 (10)
C140.0354 (11)0.0378 (12)0.0435 (13)0.0018 (9)0.0047 (9)0.0058 (10)
C150.0564 (14)0.0538 (15)0.0325 (12)−0.0100 (12)0.0108 (10)−0.0030 (11)
C160.0550 (15)0.0512 (15)0.0399 (13)−0.0140 (12)0.0074 (11)−0.0092 (12)
B0.0319 (11)0.0361 (13)0.0358 (12)0.0030 (10)0.0037 (9)0.0049 (10)
Cl—C141.736 (2)C6—H60.9300
N1—C91.386 (3)C7—C81.386 (3)
N1—B1.416 (3)C7—H70.9300
N1—H10.82 (3)C8—C91.384 (3)
N2—C11.384 (3)C8—H80.9300
N2—B1.405 (3)C9—C101.416 (3)
N2—H20.78 (2)C11—C121.387 (3)
C1—C21.382 (3)C11—C161.393 (3)
C1—C101.419 (3)C11—B1.568 (3)
C2—C31.396 (3)C12—C131.380 (3)
C2—H2A0.9300C12—H110.9300
C3—C41.361 (3)C13—C141.373 (3)
C3—H30.9300C13—H120.9300
C4—C51.411 (3)C14—C151.373 (3)
C4—H40.9300C15—C161.382 (3)
C5—C61.414 (3)C15—H140.9300
C5—C101.418 (3)C16—H150.9300
C6—C71.364 (3)
C9—N1—B123.6 (2)C7—C8—H8120.0
C9—N1—H1114.6 (17)C8—C9—N1122.3 (2)
B—N1—H1121.7 (17)C8—C9—C10119.74 (19)
C1—N2—B124.20 (18)N1—C9—C10117.99 (18)
C1—N2—H2113 (2)C9—C10—C5119.67 (19)
B—N2—H2123 (2)C9—C10—C1120.99 (19)
C2—C1—N2122.2 (2)C5—C10—C1119.3 (2)
C2—C1—C10120.1 (2)C12—C11—C16116.2 (2)
N2—C1—C10117.69 (19)C12—C11—B122.39 (18)
C1—C2—C3119.8 (2)C16—C11—B121.4 (2)
C1—C2—H2A120.1C13—C12—C11122.9 (2)
C3—C2—H2A120.1C13—C12—H11118.5
C4—C3—C2121.4 (2)C11—C12—H11118.5
C4—C3—H3119.3C14—C13—C12118.8 (2)
C2—C3—H3119.3C14—C13—H12120.6
C3—C4—C5120.7 (2)C12—C13—H12120.6
C3—C4—H4119.7C13—C14—C15120.7 (2)
C5—C4—H4119.7C13—C14—Cl119.54 (18)
C4—C5—C6122.6 (2)C15—C14—Cl119.78 (18)
C4—C5—C10118.7 (2)C14—C15—C16119.4 (2)
C6—C5—C10118.7 (2)C14—C15—H14120.3
C7—C6—C5120.1 (2)C16—C15—H14120.3
C7—C6—H6120.0C15—C16—C11122.0 (2)
C5—C6—H6120.0C15—C16—H15119.0
C6—C7—C8121.9 (2)C11—C16—H15119.0
C6—C7—H7119.1N2—B—N1115.57 (19)
C8—C7—H7119.1N2—B—C11122.17 (18)
C9—C8—C7120.0 (2)N1—B—C11122.22 (19)
C9—C8—H8120.0
B—N2—C1—C2−179.4 (2)C6—C5—C10—C1178.8 (2)
B—N2—C1—C100.1 (3)C2—C1—C10—C9179.5 (2)
N2—C1—C2—C3−179.5 (2)N2—C1—C10—C9−0.1 (3)
C10—C1—C2—C31.0 (3)C2—C1—C10—C5−0.4 (3)
C1—C2—C3—C4−1.3 (4)N2—C1—C10—C5−179.92 (19)
C2—C3—C4—C51.1 (4)C16—C11—C12—C13−0.9 (4)
C3—C4—C5—C6−179.1 (2)B—C11—C12—C13177.9 (2)
C3—C4—C5—C10−0.5 (3)C11—C12—C13—C14−0.3 (4)
C4—C5—C6—C7179.6 (2)C12—C13—C14—C151.5 (4)
C10—C5—C6—C70.9 (3)C12—C13—C14—Cl−178.80 (19)
C5—C6—C7—C8−0.2 (4)C13—C14—C15—C16−1.4 (4)
C6—C7—C8—C9−0.4 (4)Cl—C14—C15—C16178.9 (2)
C7—C8—C9—N1−179.2 (2)C14—C15—C16—C110.2 (4)
C7—C8—C9—C100.2 (3)C12—C11—C16—C150.9 (4)
B—N1—C9—C8179.2 (2)B—C11—C16—C15−177.8 (2)
B—N1—C9—C10−0.2 (3)C1—N2—B—N1−0.2 (3)
C8—C9—C10—C50.5 (3)C1—N2—B—C11177.6 (2)
N1—C9—C10—C5179.96 (18)C9—N1—B—N20.2 (3)
C8—C9—C10—C1−179.3 (2)C9—N1—B—C11−177.60 (19)
N1—C9—C10—C10.1 (3)C12—C11—B—N2178.0 (2)
C4—C5—C10—C9−179.77 (19)C16—C11—B—N2−3.3 (3)
C6—C5—C10—C9−1.1 (3)C12—C11—B—N1−4.3 (3)
C4—C5—C10—C10.1 (3)C16—C11—B—N1174.4 (2)
D—H···AD—HH···AD···AD—H···A
N2—H2···Cli0.78 (2)2.93 (2)3.666 (2)158 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2⋯Cli0.78 (2)2.93 (2)3.666 (2)158 (2)

Symmetry code: (i) .

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