Literature DB >> 22798857

N'-[(E)-1-(4-Bromo-phen-yl)ethyl-idene]-2-(2-methyl-4-nitro-1H-imidazol-1-yl)acetohydrazide.

Hoong-Kun Fun, Ching Kheng Quah, Priya V Frank, N Damodara, Balakrishna Kalluraya.   

Abstract

In the title compound, C(14)H(14)BrN(5)O(3), the mean plane of the imidazole ring (r.m.s deviation = 0.004 Å) forms a dihedral angle of 58.13 (7)° with the benzene ring. In the crystal, mol-ecules are linked via N-H⋯O, C-H⋯O and C-H⋯N hydrogen bonds into a three-dimensional network. A short Br⋯Br contact of 3.4932 (2) Å also occurs.

Entities:  

Year:  2012        PMID: 22798857      PMCID: PMC3393992          DOI: 10.1107/S160053681202795X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to and applications of imidazole derivatives, see: Priya & Kalluraya (2005 ▶); Krapcho & Turk (1966 ▶); Chu et al. (2004 ▶); Khalafi-Nezhad et al. (2005 ▶). For standard bond-length data, see: Allen et al. (1987 ▶). For the stability of the temperature controller used in the data collection, see Cosier & Glazer (1986 ▶).

Experimental

Crystal data

C14H14BrN5O3 M = 380.21 Monoclinic, a = 8.4176 (1) Å b = 10.6541 (1) Å c = 17.4933 (2) Å β = 90.100 (1)° V = 1568.83 (3) Å3 Z = 4 Mo Kα radiation μ = 2.64 mm−1 T = 100 K 0.37 × 0.33 × 0.15 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.441, T max = 0.701 45099 measured reflections 6320 independent reflections 5026 reflections with I > 2σ(I) R int = 0.040

Refinement

R[F 2 > 2σ(F 2)] = 0.032 wR(F 2) = 0.082 S = 1.02 6320 reflections 214 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.88 e Å−3 Δρmin = −0.66 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S160053681202795X/rz2774sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681202795X/rz2774Isup2.hkl Supplementary material file. DOI: 10.1107/S160053681202795X/rz2774Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H14BrN5O3F(000) = 768
Mr = 380.21Dx = 1.610 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 9969 reflections
a = 8.4176 (1) Åθ = 2.3–33.5°
b = 10.6541 (1) ŵ = 2.64 mm1
c = 17.4933 (2) ÅT = 100 K
β = 90.100 (1)°Block, yellow
V = 1568.83 (3) Å30.37 × 0.33 × 0.15 mm
Z = 4
Bruker SMART APEXII CCD area-detector diffractometer6320 independent reflections
Radiation source: fine-focus sealed tube5026 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.040
φ and ω scansθmax = 33.9°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −13→13
Tmin = 0.441, Tmax = 0.701k = −16→16
45099 measured reflectionsl = −27→27
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.032Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.082H atoms treated by a mixture of independent and constrained refinement
S = 1.02w = 1/[σ2(Fo2) + (0.0423P)2 + 0.4612P] where P = (Fo2 + 2Fc2)/3
6320 reflections(Δ/σ)max = 0.001
214 parametersΔρmax = 0.88 e Å3
0 restraintsΔρmin = −0.66 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Br10.021322 (19)−0.359303 (13)0.050226 (9)0.03144 (5)
O10.45656 (12)0.54105 (9)0.08914 (5)0.02360 (19)
O20.13283 (13)0.85764 (9)0.31753 (6)0.0269 (2)
O3−0.04787 (11)0.73832 (11)0.26628 (7)0.0345 (3)
N10.33805 (12)0.23194 (9)0.05430 (6)0.01687 (18)
N20.40021 (13)0.34967 (10)0.04122 (6)0.01891 (19)
N30.31916 (11)0.50038 (9)0.22432 (6)0.01478 (17)
N40.36372 (12)0.68190 (10)0.28408 (6)0.01722 (18)
N50.09082 (13)0.76031 (10)0.28541 (7)0.0215 (2)
C10.29424 (16)−0.06979 (12)−0.03559 (7)0.0221 (2)
H1A0.3658−0.0588−0.07700.026*
C20.22669 (16)−0.18701 (12)−0.02307 (8)0.0241 (2)
H2A0.2518−0.2559−0.05530.029*
C30.12217 (16)−0.20161 (12)0.03723 (8)0.0229 (2)
C40.08571 (16)−0.10281 (12)0.08621 (7)0.0212 (2)
H4A0.0153−0.11490.12800.025*
C50.15433 (14)0.01392 (11)0.07288 (7)0.0184 (2)
H5A0.13000.08220.10580.022*
C60.25865 (14)0.03226 (11)0.01173 (7)0.0181 (2)
C70.32849 (15)0.15744 (11)−0.00367 (7)0.0182 (2)
C80.40582 (14)0.43392 (11)0.09867 (7)0.0168 (2)
C90.35054 (14)0.39082 (11)0.17701 (7)0.0163 (2)
H9A0.25280.33990.17190.020*
H9B0.43350.33820.20120.020*
C100.17458 (14)0.55668 (11)0.23059 (7)0.0171 (2)
H10A0.07460.52630.21340.021*
C110.20643 (14)0.66705 (11)0.26741 (7)0.0172 (2)
C120.43050 (13)0.57897 (11)0.25673 (6)0.01558 (19)
C130.38107 (18)0.19047 (14)−0.08367 (7)0.0267 (3)
H13A0.34210.2744−0.09690.040*
H13B0.33780.1290−0.11980.040*
H13C0.49740.1894−0.08620.040*
C140.60238 (15)0.54790 (13)0.26074 (8)0.0226 (2)
H14A0.65560.60590.29590.034*
H14B0.64940.55570.20980.034*
H14C0.61550.46160.27920.034*
H1N20.436 (2)0.3704 (17)0.0004 (12)0.028 (5)*
U11U22U33U12U13U23
Br10.03837 (9)0.01604 (7)0.03988 (9)−0.00786 (5)−0.01265 (6)0.00296 (5)
O10.0347 (5)0.0166 (4)0.0195 (4)−0.0089 (4)0.0077 (4)−0.0024 (3)
O20.0300 (5)0.0167 (4)0.0342 (5)0.0039 (3)0.0041 (4)−0.0044 (4)
O30.0162 (4)0.0334 (6)0.0537 (7)0.0041 (4)0.0052 (4)−0.0103 (5)
N10.0189 (4)0.0138 (4)0.0179 (4)−0.0020 (3)0.0007 (3)−0.0014 (3)
N20.0244 (5)0.0161 (4)0.0162 (4)−0.0052 (4)0.0044 (4)−0.0017 (4)
N30.0153 (4)0.0130 (4)0.0160 (4)−0.0008 (3)0.0029 (3)−0.0008 (3)
N40.0176 (4)0.0152 (4)0.0189 (4)0.0000 (3)0.0009 (4)−0.0017 (3)
N50.0204 (5)0.0181 (5)0.0261 (5)0.0030 (4)0.0068 (4)0.0003 (4)
C10.0245 (6)0.0194 (5)0.0222 (5)0.0008 (4)−0.0012 (5)−0.0056 (4)
C20.0272 (6)0.0159 (5)0.0291 (6)0.0019 (5)−0.0055 (5)−0.0065 (5)
C30.0255 (6)0.0147 (5)0.0284 (6)−0.0028 (4)−0.0095 (5)0.0003 (4)
C40.0241 (6)0.0183 (5)0.0212 (5)−0.0036 (4)−0.0030 (4)0.0009 (4)
C50.0213 (5)0.0156 (5)0.0183 (5)−0.0013 (4)−0.0020 (4)−0.0024 (4)
C60.0201 (5)0.0149 (5)0.0192 (5)−0.0007 (4)−0.0024 (4)−0.0030 (4)
C70.0200 (5)0.0168 (5)0.0176 (5)−0.0017 (4)0.0007 (4)−0.0028 (4)
C80.0182 (5)0.0154 (5)0.0168 (5)−0.0018 (4)0.0030 (4)−0.0012 (4)
C90.0199 (5)0.0116 (4)0.0175 (5)−0.0016 (4)0.0035 (4)−0.0016 (4)
C100.0145 (5)0.0167 (5)0.0201 (5)−0.0011 (4)0.0033 (4)0.0007 (4)
C110.0172 (5)0.0148 (5)0.0197 (5)0.0011 (4)0.0040 (4)−0.0004 (4)
C120.0165 (5)0.0140 (4)0.0163 (5)−0.0002 (4)0.0002 (4)−0.0004 (4)
C130.0371 (7)0.0252 (6)0.0178 (5)−0.0095 (5)0.0034 (5)−0.0032 (5)
C140.0162 (5)0.0221 (6)0.0296 (6)0.0026 (4)−0.0041 (5)−0.0036 (5)
Br1—C31.8962 (13)C3—C41.3919 (19)
O1—C81.2302 (14)C4—C51.3912 (17)
O2—N51.2310 (15)C4—H4A0.9500
O3—N51.2363 (15)C5—C61.3989 (17)
N1—C71.2901 (15)C5—H5A0.9500
N1—N21.3783 (14)C6—C71.4824 (17)
N2—C81.3483 (15)C7—C131.5102 (18)
N2—H1N20.81 (2)C8—C91.5190 (16)
N3—C101.3614 (15)C9—H9A0.9900
N3—C121.3779 (15)C9—H9B0.9900
N3—C91.4554 (15)C10—C111.3671 (17)
N4—C121.3223 (15)C10—H10A0.9500
N4—C111.3644 (16)C12—C141.4857 (16)
N5—C111.4264 (15)C13—H13A0.9800
C1—C21.3898 (19)C13—H13B0.9800
C1—C61.3992 (17)C13—H13C0.9800
C1—H1A0.9500C14—H14A0.9800
C2—C31.383 (2)C14—H14B0.9800
C2—H2A0.9500C14—H14C0.9800
C7—N1—N2116.91 (10)C6—C7—C13119.67 (10)
C8—N2—N1119.67 (10)O1—C8—N2121.89 (11)
C8—N2—H1N2117.7 (13)O1—C8—C9120.65 (10)
N1—N2—H1N2122.6 (13)N2—C8—C9117.44 (10)
C10—N3—C12107.86 (9)N3—C9—C8109.07 (9)
C10—N3—C9124.22 (10)N3—C9—H9A109.9
C12—N3—C9126.68 (10)C8—C9—H9A109.9
C12—N4—C11103.86 (10)N3—C9—H9B109.9
O2—N5—O3123.61 (11)C8—C9—H9B109.9
O2—N5—C11119.47 (11)H9A—C9—H9B108.3
O3—N5—C11116.91 (11)N3—C10—C11104.02 (10)
C2—C1—C6121.13 (12)N3—C10—H10A128.0
C2—C1—H1A119.4C11—C10—H10A128.0
C6—C1—H1A119.4N4—C11—C10112.94 (10)
C3—C2—C1118.82 (12)N4—C11—N5122.29 (11)
C3—C2—H2A120.6C10—C11—N5124.74 (11)
C1—C2—H2A120.6N4—C12—N3111.32 (10)
C2—C3—C4121.70 (12)N4—C12—C14125.61 (11)
C2—C3—Br1118.46 (10)N3—C12—C14123.07 (10)
C4—C3—Br1119.80 (11)C7—C13—H13A109.5
C5—C4—C3118.74 (12)C7—C13—H13B109.5
C5—C4—H4A120.6H13A—C13—H13B109.5
C3—C4—H4A120.6C7—C13—H13C109.5
C4—C5—C6120.96 (11)H13A—C13—H13C109.5
C4—C5—H5A119.5H13B—C13—H13C109.5
C6—C5—H5A119.5C12—C14—H14A109.5
C5—C6—C1118.63 (11)C12—C14—H14B109.5
C5—C6—C7120.95 (11)H14A—C14—H14B109.5
C1—C6—C7120.41 (11)C12—C14—H14C109.5
N1—C7—C6115.78 (11)H14A—C14—H14C109.5
N1—C7—C13124.54 (11)H14B—C14—H14C109.5
C7—N1—N2—C8176.66 (12)C12—N3—C9—C8−73.37 (14)
C6—C1—C2—C30.25 (19)O1—C8—C9—N318.68 (16)
C1—C2—C3—C4−1.2 (2)N2—C8—C9—N3−162.77 (10)
C1—C2—C3—Br1176.42 (10)C12—N3—C10—C11−0.47 (13)
C2—C3—C4—C51.3 (2)C9—N3—C10—C11−168.42 (10)
Br1—C3—C4—C5−176.37 (9)C12—N4—C11—C100.27 (14)
C3—C4—C5—C6−0.28 (19)C12—N4—C11—N5−178.11 (11)
C4—C5—C6—C1−0.66 (18)N3—C10—C11—N40.13 (14)
C4—C5—C6—C7178.40 (11)N3—C10—C11—N5178.47 (11)
C2—C1—C6—C50.68 (19)O2—N5—C11—N4−0.47 (18)
C2—C1—C6—C7−178.39 (12)O3—N5—C11—N4178.49 (12)
N2—N1—C7—C6−178.98 (10)O2—N5—C11—C10−178.65 (12)
N2—N1—C7—C130.29 (18)O3—N5—C11—C100.30 (19)
C5—C6—C7—N124.91 (17)C11—N4—C12—N3−0.58 (13)
C1—C6—C7—N1−156.05 (12)C11—N4—C12—C14−179.49 (12)
C5—C6—C7—C13−154.40 (12)C10—N3—C12—N40.69 (13)
C1—C6—C7—C1324.64 (18)C9—N3—C12—N4168.26 (11)
N1—N2—C8—O1−178.13 (11)C10—N3—C12—C14179.63 (11)
N1—N2—C8—C93.34 (17)C9—N3—C12—C14−12.80 (18)
C10—N3—C9—C892.28 (13)
D—H···AD—HH···AD···AD—H···A
N2—H1N2···O1i0.81 (2)2.04 (2)2.8318 (14)166.6 (18)
C9—H9A···O3ii0.992.313.1818 (16)147
C9—H9B···N4iii0.992.403.3462 (16)160
C10—H10A···O2ii0.952.563.4488 (16)155
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N2—H1N2⋯O1i 0.81 (2)2.04 (2)2.8318 (14)166.6 (18)
C9—H9A⋯O3ii 0.992.313.1818 (16)147
C9—H9B⋯N4iii 0.992.403.3462 (16)160
C10—H10A⋯O2ii 0.952.563.4488 (16)155

Symmetry codes: (i) ; (ii) ; (iii) .

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