| Literature DB >> 22798827 |
Samaneh Feizi, Ali Hossein Rezayan, Soroush Sardari, Behrouz Notash.
Abstract
In the title mol-ecule, C(14)H(12)N(4)O(2)S, the conformation about the imine bond is trans. The dihedral angle between the two rings is 88.22 (11)°. An intra-molecular N-H⋯N contact occurs. The crystal structure features N-H⋯S and C-H⋯O hydrogen bonds.Entities:
Year: 2012 PMID: 22798827 PMCID: PMC3393962 DOI: 10.1107/S1600536812026803
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C14H12N4O2S | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 7967 reflections | |
| θ = 2.6–29.2° | |
| µ = 0.24 mm−1 | |
| α = 90.382 (7)° | |
| β = 93.974 (7)° | Prism, yellow |
| γ = 110.004 (8)° | 0.38 × 0.35 × 0.32 mm |
| Stoe IPDS II diffractometer | 3832 independent reflections |
| Radiation source: fine-focus sealed tube | 2715 reflections with |
| Graphite monochromator | |
| Detector resolution: 0.15 mm pixels mm-1 | θmax = 29.2°, θmin = 2.6° |
| rotation method scans | |
| Absorption correction: numerical ( | |
| 7967 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3832 reflections | (Δ/σ)max = 0.005 |
| 202 parameters | Δρmax = 0.26 e Å−3 |
| 0 restraints | Δρmin = −0.23 e Å−3 |
| Experimental. shape of crystal determined optically |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.2544 (3) | 0.5115 (3) | 0.51143 (14) | 0.0381 (4) | |
| C2 | 0.2249 (3) | 0.5628 (3) | 0.40645 (15) | 0.0509 (5) | |
| H2 | 0.2076 | 0.4892 | 0.3465 | 0.061* | |
| C3 | 0.2213 (4) | 0.7226 (3) | 0.39147 (18) | 0.0609 (6) | |
| H3 | 0.2007 | 0.7575 | 0.3212 | 0.073* | |
| C4 | 0.2482 (4) | 0.8319 (3) | 0.48040 (19) | 0.0597 (6) | |
| H4 | 0.2457 | 0.9404 | 0.4700 | 0.072* | |
| C5 | 0.2790 (3) | 0.7805 (3) | 0.58510 (17) | 0.0479 (5) | |
| H5 | 0.2977 | 0.8559 | 0.6442 | 0.057* | |
| C6 | 0.2826 (3) | 0.6186 (2) | 0.60429 (14) | 0.0366 (4) | |
| C7 | 0.3227 (3) | 0.5732 (3) | 0.71685 (14) | 0.0406 (4) | |
| H7 | 0.388 (3) | 0.492 (3) | 0.7285 (18) | 0.052 (6)* | |
| C8 | 0.2886 (3) | 0.6664 (2) | 0.99057 (14) | 0.0372 (4) | |
| C9 | 0.1339 (3) | 0.8556 (2) | 1.06241 (14) | 0.0375 (4) | |
| C10 | 0.2729 (3) | 0.9819 (3) | 1.12422 (16) | 0.0469 (5) | |
| H10 | 0.4023 | 1.0094 | 1.1118 | 0.056* | |
| C11 | 0.2178 (4) | 1.0678 (3) | 1.20523 (17) | 0.0530 (5) | |
| H11 | 0.3108 | 1.1530 | 1.2475 | 0.064* | |
| C12 | 0.0278 (4) | 1.0282 (3) | 1.22337 (17) | 0.0517 (5) | |
| H12 | −0.0080 | 1.0859 | 1.2782 | 0.062* | |
| C13 | −0.1108 (3) | 0.9032 (3) | 1.16084 (18) | 0.0514 (5) | |
| H13 | −0.2402 | 0.8768 | 1.1732 | 0.062* | |
| C14 | −0.0578 (3) | 0.8164 (3) | 1.07917 (16) | 0.0441 (5) | |
| H14 | −0.1512 | 0.7325 | 1.0362 | 0.053* | |
| O1 | 0.2599 (4) | 0.2612 (3) | 0.43801 (14) | 0.0824 (6) | |
| O2 | 0.2395 (4) | 0.2728 (2) | 0.60884 (14) | 0.0829 (6) | |
| N1 | 0.2507 (3) | 0.3363 (2) | 0.52080 (13) | 0.0453 (4) | |
| N2 | 0.2793 (2) | 0.6465 (2) | 0.79714 (12) | 0.0395 (4) | |
| N3 | 0.3341 (3) | 0.6036 (2) | 0.89882 (12) | 0.0433 (4) | |
| H3B | 0.411 (3) | 0.546 (3) | 0.9056 (18) | 0.042 (6)* | |
| N4 | 0.1877 (3) | 0.7690 (2) | 0.97626 (13) | 0.0469 (4) | |
| H4B | 0.150 (3) | 0.782 (3) | 0.916 (2) | 0.053 (7)* | |
| S1 | 0.35639 (10) | 0.60896 (8) | 1.11356 (4) | 0.05372 (19) |
| C1 | 0.0429 (10) | 0.0444 (11) | 0.0292 (8) | 0.0173 (9) | 0.0053 (7) | −0.0006 (7) |
| C2 | 0.0620 (14) | 0.0657 (15) | 0.0267 (8) | 0.0237 (12) | 0.0059 (8) | 0.0002 (9) |
| C3 | 0.0796 (17) | 0.0730 (17) | 0.0355 (10) | 0.0323 (14) | 0.0075 (10) | 0.0168 (10) |
| C4 | 0.0784 (17) | 0.0517 (13) | 0.0568 (13) | 0.0310 (13) | 0.0111 (12) | 0.0180 (11) |
| C5 | 0.0622 (14) | 0.0456 (12) | 0.0411 (10) | 0.0246 (11) | 0.0072 (9) | 0.0003 (9) |
| C6 | 0.0413 (10) | 0.0440 (10) | 0.0278 (8) | 0.0185 (9) | 0.0049 (7) | −0.0004 (7) |
| C7 | 0.0536 (12) | 0.0448 (11) | 0.0295 (8) | 0.0255 (10) | −0.0008 (8) | −0.0045 (7) |
| C8 | 0.0494 (11) | 0.0370 (10) | 0.0281 (8) | 0.0190 (9) | 0.0010 (7) | −0.0027 (7) |
| C9 | 0.0547 (12) | 0.0367 (10) | 0.0281 (8) | 0.0247 (9) | 0.0037 (7) | 0.0017 (7) |
| C10 | 0.0467 (12) | 0.0527 (13) | 0.0433 (10) | 0.0194 (10) | 0.0061 (9) | −0.0046 (9) |
| C11 | 0.0640 (15) | 0.0501 (13) | 0.0444 (11) | 0.0199 (11) | 0.0005 (10) | −0.0139 (9) |
| C12 | 0.0698 (15) | 0.0571 (13) | 0.0395 (10) | 0.0352 (12) | 0.0114 (10) | −0.0032 (9) |
| C13 | 0.0521 (13) | 0.0590 (14) | 0.0493 (11) | 0.0248 (11) | 0.0152 (10) | 0.0095 (10) |
| C14 | 0.0541 (12) | 0.0363 (10) | 0.0407 (10) | 0.0147 (9) | 0.0008 (9) | 0.0021 (8) |
| O1 | 0.1373 (19) | 0.0725 (12) | 0.0507 (10) | 0.0532 (13) | 0.0082 (10) | −0.0205 (9) |
| O2 | 0.155 (2) | 0.0529 (11) | 0.0455 (9) | 0.0410 (12) | 0.0083 (11) | 0.0041 (8) |
| N1 | 0.0516 (10) | 0.0481 (10) | 0.0377 (8) | 0.0193 (8) | 0.0037 (7) | −0.0076 (7) |
| N2 | 0.0534 (10) | 0.0419 (9) | 0.0275 (7) | 0.0222 (8) | 0.0021 (6) | −0.0007 (6) |
| N3 | 0.0664 (12) | 0.0493 (10) | 0.0259 (7) | 0.0359 (10) | −0.0009 (7) | −0.0034 (6) |
| N4 | 0.0751 (13) | 0.0546 (11) | 0.0257 (7) | 0.0425 (10) | −0.0017 (7) | −0.0034 (7) |
| S1 | 0.0844 (4) | 0.0706 (4) | 0.0259 (2) | 0.0526 (3) | 0.0011 (2) | 0.0008 (2) |
| C1—C2 | 1.385 (3) | C9—C14 | 1.374 (3) |
| C1—C6 | 1.405 (2) | C9—C10 | 1.377 (3) |
| C1—N1 | 1.472 (3) | C9—N4 | 1.432 (2) |
| C2—C3 | 1.369 (3) | C10—C11 | 1.386 (3) |
| C2—H2 | 0.9300 | C10—H10 | 0.9300 |
| C3—C4 | 1.379 (3) | C11—C12 | 1.365 (3) |
| C3—H3 | 0.9300 | C11—H11 | 0.9300 |
| C4—C5 | 1.384 (3) | C12—C13 | 1.374 (3) |
| C4—H4 | 0.9300 | C12—H12 | 0.9300 |
| C5—C6 | 1.394 (3) | C13—C14 | 1.389 (3) |
| C5—H5 | 0.9300 | C13—H13 | 0.9300 |
| C6—C7 | 1.470 (2) | C14—H14 | 0.9300 |
| C7—N2 | 1.273 (2) | O1—N1 | 1.209 (2) |
| C7—H7 | 0.97 (2) | O2—N1 | 1.202 (2) |
| C8—N4 | 1.327 (2) | N2—N3 | 1.371 (2) |
| C8—N3 | 1.349 (2) | N3—H3B | 0.87 (2) |
| C8—S1 | 1.6799 (18) | N4—H4B | 0.79 (3) |
| C2—C1—C6 | 122.28 (19) | C10—C9—N4 | 120.05 (19) |
| C2—C1—N1 | 116.16 (17) | C9—C10—C11 | 119.3 (2) |
| C6—C1—N1 | 121.55 (16) | C9—C10—H10 | 120.4 |
| C3—C2—C1 | 119.5 (2) | C11—C10—H10 | 120.4 |
| C3—C2—H2 | 120.2 | C12—C11—C10 | 120.4 (2) |
| C1—C2—H2 | 120.2 | C12—C11—H11 | 119.8 |
| C2—C3—C4 | 120.11 (19) | C10—C11—H11 | 119.8 |
| C2—C3—H3 | 119.9 | C11—C12—C13 | 120.19 (19) |
| C4—C3—H3 | 119.9 | C11—C12—H12 | 119.9 |
| C3—C4—C5 | 120.2 (2) | C13—C12—H12 | 119.9 |
| C3—C4—H4 | 119.9 | C12—C13—C14 | 120.0 (2) |
| C5—C4—H4 | 119.9 | C12—C13—H13 | 120.0 |
| C4—C5—C6 | 121.7 (2) | C14—C13—H13 | 120.0 |
| C4—C5—H5 | 119.1 | C9—C14—C13 | 119.4 (2) |
| C6—C5—H5 | 119.1 | C9—C14—H14 | 120.3 |
| C5—C6—C1 | 116.22 (17) | C13—C14—H14 | 120.3 |
| C5—C6—C7 | 119.24 (17) | O2—N1—O1 | 122.1 (2) |
| C1—C6—C7 | 124.48 (17) | O2—N1—C1 | 119.95 (16) |
| N2—C7—C6 | 119.59 (17) | O1—N1—C1 | 117.90 (18) |
| N2—C7—H7 | 121.3 (13) | C7—N2—N3 | 115.10 (15) |
| C6—C7—H7 | 119.1 (13) | C8—N3—N2 | 120.88 (16) |
| N4—C8—N3 | 116.38 (16) | C8—N3—H3B | 118.3 (14) |
| N4—C8—S1 | 124.22 (13) | N2—N3—H3B | 120.3 (14) |
| N3—C8—S1 | 119.39 (14) | C8—N4—C9 | 125.10 (16) |
| C14—C9—C10 | 120.63 (17) | C8—N4—H4B | 118.8 (17) |
| C14—C9—N4 | 119.25 (19) | C9—N4—H4B | 116.1 (17) |
| C6—C1—C2—C3 | −0.5 (3) | C11—C12—C13—C14 | 0.2 (3) |
| N1—C1—C2—C3 | 178.3 (2) | C10—C9—C14—C13 | −1.3 (3) |
| C1—C2—C3—C4 | 0.4 (4) | N4—C9—C14—C13 | −178.36 (18) |
| C2—C3—C4—C5 | 0.0 (4) | C12—C13—C14—C9 | 0.6 (3) |
| C3—C4—C5—C6 | −0.4 (4) | C2—C1—N1—O2 | −166.3 (2) |
| C4—C5—C6—C1 | 0.4 (3) | C6—C1—N1—O2 | 12.5 (3) |
| C4—C5—C6—C7 | 177.9 (2) | C2—C1—N1—O1 | 14.0 (3) |
| C2—C1—C6—C5 | 0.1 (3) | C6—C1—N1—O1 | −167.2 (2) |
| N1—C1—C6—C5 | −178.62 (18) | C6—C7—N2—N3 | −175.80 (18) |
| C2—C1—C6—C7 | −177.3 (2) | N4—C8—N3—N2 | 0.6 (3) |
| N1—C1—C6—C7 | 4.0 (3) | S1—C8—N3—N2 | 179.32 (15) |
| C5—C6—C7—N2 | 27.7 (3) | C7—N2—N3—C8 | −176.8 (2) |
| C1—C6—C7—N2 | −155.0 (2) | N3—C8—N4—C9 | −176.5 (2) |
| C14—C9—C10—C11 | 1.1 (3) | S1—C8—N4—C9 | 4.9 (3) |
| N4—C9—C10—C11 | 178.15 (19) | C14—C9—N4—C8 | −115.2 (2) |
| C9—C10—C11—C12 | −0.2 (3) | C10—C9—N4—C8 | 67.7 (3) |
| C10—C11—C12—C13 | −0.4 (4) |
| H··· | ||||
| N3—H3 | 0.87 (2) | 2.51 (2) | 3.3664 (18) | 168.8 (19) |
| N4—H4 | 0.79 (3) | 2.29 (2) | 2.642 (2) | 108 (2) |
| C7—H7···O2 | 0.97 (2) | 2.26 (2) | 2.703 (3) | 106.5 (16) |
| C11—H11···O1ii | 0.93 | 2.60 | 3.214 (3) | 125 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N3—H3 | 0.87 (2) | 2.51 (2) | 3.3664 (18) | 168.8 (19) |
| N4—H4 | 0.79 (3) | 2.29 (2) | 2.642 (2) | 108 (2) |
| C11—H11⋯O1ii | 0.93 | 2.60 | 3.214 (3) | 125 |
Symmetry codes: (i) ; (ii) .