| Literature DB >> 22798771 |
Veronica Diesen1, Cláudio Lousada, Andreas Fischer.
Abstract
CRYSTALS OF THE HYDROGEN SULFATE SALT OF CHLORDIAZEPOXIDE (SYSTEMATIC NAME: 7-chloro-N-methyl-5-phenyl-2,3-dihydro-1H-1,4-benzodiazepin-2-iminium 4-oxide hydrogen sulfate), C(16)H(15)ClN(3)O(+)·HSO(4) (-), were obtained from a solution of chlordiazepoxide and sulfuric acid in methanol. The structure features chlordiazepoxide mol-ecules that are protonated at the imine N atom. The seven-membered ring adopts a boat conformation with the CH(2) group as the prow and the two aryl C atoms as the stern. The dihedral angle between the benzene rings is 72.41 (6)°. In the crystal, the HSO(4) (-) anion acts as a bridging group between two chlordiazepoxide cations. The H atom of the protonated imino N forms an N-H⋯O hydrogen bond with a hydrogen sulfate ion. The anion in turn forms two hydrogen bonds, O-H⋯O with the anion as donor and N-H⋯O with the anion as acceptor, to generate an R(2) (2)(10) loop. Each HSO(4) (-) anion connects two chlordiazepoxide moieties of the same chirality.Entities:
Year: 2012 PMID: 22798771 PMCID: PMC3393906 DOI: 10.1107/S1600536812024920
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C16H15ClN3O+·HSO4− | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 84 reflections |
| θ = 4.2–20.7° | |
| µ = 0.39 mm−1 | |
| β = 99.657 (9)° | Plate, yellow |
| 0.58 × 0.54 × 0.14 mm | |
| Bruker–Nonius KappaCCD diffractometer | 2802 reflections with |
| Radiation source: fine-focus sealed tube | |
| φ and ω scans | θmax = 27.5°, θmin = 4.5° |
| Absorption correction: multi-scan ( | |
| 23827 measured reflections | |
| 3835 independent reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3835 reflections | (Δ/σ)max < 0.001 |
| 245 parameters | Δρmax = 0.33 e Å−3 |
| 1 restraint | Δρmin = −0.39 e Å−3 |
| 13 constraints |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.29397 (13) | 0.9226 (2) | 0.03883 (14) | 0.0192 (4) | |
| C2 | 0.23368 (14) | 1.0175 (2) | 0.08120 (14) | 0.0196 (4) | |
| C3 | 0.18881 (14) | 0.9588 (2) | 0.15418 (14) | 0.0189 (4) | |
| C4 | 0.20316 (13) | 0.8080 (2) | 0.18584 (13) | 0.0154 (4) | |
| C5 | 0.26573 (13) | 0.7120 (2) | 0.14382 (13) | 0.0157 (4) | |
| C6 | 0.31045 (13) | 0.7742 (2) | 0.06926 (14) | 0.0185 (4) | |
| C7 | 0.29408 (13) | 0.5551 (2) | 0.17423 (13) | 0.0147 (4) | |
| C8 | 0.39263 (13) | 0.5004 (2) | 0.16413 (13) | 0.0163 (4) | |
| C9 | 0.40329 (14) | 0.3805 (2) | 0.10173 (14) | 0.0192 (4) | |
| C10 | 0.49545 (14) | 0.3410 (2) | 0.08574 (15) | 0.0233 (4) | |
| C11 | 0.57571 (14) | 0.4185 (3) | 0.13293 (15) | 0.0253 (5) | |
| C12 | 0.56519 (15) | 0.5383 (3) | 0.19530 (16) | 0.0288 (5) | |
| C13 | 0.47339 (14) | 0.5800 (3) | 0.21034 (15) | 0.0251 (5) | |
| C14 | 0.13111 (13) | 0.5056 (2) | 0.20202 (13) | 0.0161 (4) | |
| C15 | 0.12400 (12) | 0.6247 (2) | 0.27772 (13) | 0.0144 (4) | |
| C16 | 0.06161 (16) | 0.6949 (3) | 0.42636 (15) | 0.0252 (5) | |
| Cl1 | 0.35131 (4) | 0.99179 (6) | −0.05429 (4) | 0.02899 (14) | |
| N1 | 0.15794 (11) | 0.76324 (19) | 0.26510 (11) | 0.0159 (3) | |
| N2 | 0.23277 (11) | 0.46083 (18) | 0.20355 (11) | 0.0149 (3) | |
| N3 | 0.08275 (12) | 0.5887 (2) | 0.35181 (12) | 0.0173 (3) | |
| O1 | 0.25496 (9) | 0.32031 (15) | 0.23206 (10) | 0.0211 (3) | |
| O2 | 0.21788 (10) | 0.2042 (2) | 0.39254 (12) | 0.0328 (4) | |
| O3 | 0.08836 (10) | 0.02501 (17) | 0.33641 (11) | 0.0304 (4) | |
| O4 | 0.12080 (11) | 0.1162 (2) | 0.50292 (11) | 0.0361 (4) | |
| O5 | 0.04859 (11) | 0.28024 (17) | 0.37061 (12) | 0.0309 (4) | |
| S1 | 0.11383 (3) | 0.15276 (5) | 0.40179 (3) | 0.01669 (12) | |
| H2 | 0.2234 | 1.1204 | 0.0605 | 0.024* | |
| H3 | 0.1471 | 1.0227 | 0.1837 | 0.023* | |
| H6 | 0.3529 | 0.7123 | 0.0393 | 0.022* | |
| H9 | 0.3481 | 0.3259 | 0.0702 | 0.023* | |
| H10 | 0.5033 | 0.2602 | 0.0421 | 0.028* | |
| H11 | 0.6386 | 0.3895 | 0.1225 | 0.030* | |
| H12 | 0.6206 | 0.5915 | 0.2275 | 0.035* | |
| H13 | 0.4656 | 0.6631 | 0.2523 | 0.030* | |
| H14A | 0.0928 | 0.4149 | 0.2145 | 0.019* | |
| H14B | 0.1037 | 0.5461 | 0.1368 | 0.019* | |
| H16A | 0.1194 | 0.7562 | 0.4500 | 0.038* | |
| H16B | 0.0429 | 0.6375 | 0.4808 | 0.038* | |
| H16C | 0.0083 | 0.7625 | 0.3983 | 0.038* | |
| H1 | 0.1412 (14) | 0.834 (2) | 0.2988 (14) | 0.019* | |
| H3A | 0.0662 (16) | 0.499 (3) | 0.3548 (16) | 0.021* | |
| H2A | 0.2223 (18) | 0.242 (3) | 0.340 (2) | 0.039* |
| C1 | 0.0178 (9) | 0.0210 (11) | 0.0193 (10) | −0.0002 (8) | 0.0049 (7) | 0.0032 (8) |
| C2 | 0.0213 (10) | 0.0141 (10) | 0.0233 (10) | 0.0017 (8) | 0.0030 (8) | 0.0017 (8) |
| C3 | 0.0186 (10) | 0.0169 (10) | 0.0212 (10) | 0.0034 (8) | 0.0035 (7) | −0.0027 (8) |
| C4 | 0.0146 (9) | 0.0157 (10) | 0.0157 (9) | 0.0002 (7) | 0.0023 (7) | −0.0015 (8) |
| C5 | 0.0159 (9) | 0.0139 (10) | 0.0171 (9) | 0.0013 (7) | 0.0025 (7) | −0.0013 (8) |
| C6 | 0.0181 (9) | 0.0186 (11) | 0.0197 (10) | 0.0026 (8) | 0.0061 (7) | 0.0007 (8) |
| C7 | 0.0167 (9) | 0.0152 (10) | 0.0124 (9) | 0.0013 (7) | 0.0029 (7) | −0.0020 (7) |
| C8 | 0.0157 (9) | 0.0164 (10) | 0.0178 (9) | 0.0042 (8) | 0.0056 (7) | 0.0035 (8) |
| C9 | 0.0192 (10) | 0.0170 (11) | 0.0223 (10) | 0.0011 (8) | 0.0065 (8) | 0.0017 (8) |
| C10 | 0.0261 (11) | 0.0204 (11) | 0.0258 (11) | 0.0076 (9) | 0.0109 (8) | 0.0006 (9) |
| C11 | 0.0168 (10) | 0.0330 (13) | 0.0273 (11) | 0.0091 (9) | 0.0076 (8) | 0.0065 (10) |
| C12 | 0.0162 (10) | 0.0372 (14) | 0.0318 (12) | −0.0031 (9) | 0.0001 (8) | −0.0023 (10) |
| C13 | 0.0224 (11) | 0.0259 (12) | 0.0270 (11) | −0.0004 (9) | 0.0044 (8) | −0.0089 (9) |
| C14 | 0.0136 (9) | 0.0176 (10) | 0.0178 (9) | 0.0003 (7) | 0.0052 (7) | −0.0031 (8) |
| C15 | 0.0110 (8) | 0.0165 (10) | 0.0159 (9) | 0.0035 (7) | 0.0023 (7) | −0.0004 (8) |
| C16 | 0.0315 (11) | 0.0263 (12) | 0.0201 (10) | 0.0063 (9) | 0.0113 (8) | 0.0000 (9) |
| Cl1 | 0.0333 (3) | 0.0255 (3) | 0.0325 (3) | 0.0051 (2) | 0.0179 (2) | 0.0108 (2) |
| N1 | 0.0191 (8) | 0.0146 (9) | 0.0156 (8) | 0.0026 (7) | 0.0073 (6) | −0.0036 (7) |
| N2 | 0.0178 (8) | 0.0125 (8) | 0.0151 (8) | 0.0032 (6) | 0.0048 (6) | −0.0009 (6) |
| N3 | 0.0202 (8) | 0.0142 (9) | 0.0191 (8) | 0.0019 (7) | 0.0082 (6) | −0.0007 (7) |
| O1 | 0.0272 (7) | 0.0124 (7) | 0.0265 (8) | 0.0044 (6) | 0.0123 (6) | 0.0029 (6) |
| O2 | 0.0210 (8) | 0.0484 (11) | 0.0283 (8) | −0.0117 (7) | 0.0018 (6) | 0.0130 (8) |
| O3 | 0.0296 (8) | 0.0227 (8) | 0.0402 (9) | −0.0017 (6) | 0.0100 (7) | −0.0145 (7) |
| O4 | 0.0409 (9) | 0.0502 (11) | 0.0195 (8) | 0.0005 (8) | 0.0113 (6) | 0.0093 (7) |
| O5 | 0.0319 (8) | 0.0177 (8) | 0.0434 (9) | 0.0045 (6) | 0.0071 (7) | 0.0043 (7) |
| S1 | 0.0206 (2) | 0.0146 (2) | 0.0162 (2) | −0.00200 (19) | 0.00691 (17) | −0.00031 (19) |
| C1—C6 | 1.375 (3) | N2—O1 | 1.314 (2) |
| C1—C2 | 1.384 (3) | O2—S1 | 1.5495 (15) |
| C1—Cl1 | 1.7426 (19) | O3—S1 | 1.4481 (15) |
| C2—C3 | 1.379 (3) | O4—S1 | 1.4299 (15) |
| C3—C4 | 1.396 (3) | O5—S1 | 1.4611 (15) |
| C4—C5 | 1.409 (3) | C2—H2 | 0.9500 |
| C4—N1 | 1.415 (2) | C3—H3 | 0.9500 |
| C5—C6 | 1.407 (3) | C6—H6 | 0.9500 |
| C5—C7 | 1.473 (3) | C9—H9 | 0.9500 |
| C7—N2 | 1.304 (2) | C10—H10 | 0.9500 |
| C7—C8 | 1.488 (2) | C11—H11 | 0.9500 |
| C8—C9 | 1.386 (3) | C12—H12 | 0.9500 |
| C8—C13 | 1.390 (3) | C13—H13 | 0.9500 |
| C9—C10 | 1.388 (3) | C14—H14A | 0.9900 |
| C10—C11 | 1.381 (3) | C14—H14B | 0.9900 |
| C11—C12 | 1.385 (3) | C16—H16A | 0.9800 |
| C12—C13 | 1.384 (3) | C16—H16B | 0.9800 |
| C14—N2 | 1.472 (2) | C16—H16C | 0.9800 |
| C14—C15 | 1.497 (3) | N1—H1 | 0.837 (15) |
| C15—N3 | 1.301 (2) | N3—H3A | 0.82 (2) |
| C15—N1 | 1.325 (2) | O2—H2A | 0.81 (3) |
| C16—N3 | 1.460 (3) | ||
| C6—C1—C2 | 121.28 (18) | O4—S1—O2 | 103.70 (9) |
| C6—C1—Cl1 | 118.89 (15) | O3—S1—O2 | 107.94 (9) |
| C2—C1—Cl1 | 119.83 (16) | O5—S1—O2 | 107.58 (9) |
| C3—C2—C1 | 118.37 (18) | C3—C2—H2 | 120.8 |
| C2—C3—C4 | 121.68 (18) | C1—C2—H2 | 120.8 |
| C3—C4—C5 | 120.00 (17) | C2—C3—H3 | 119.2 |
| C3—C4—N1 | 116.63 (16) | C4—C3—H3 | 119.2 |
| C5—C4—N1 | 123.22 (17) | C1—C6—H6 | 119.3 |
| C6—C5—C4 | 117.30 (17) | C5—C6—H6 | 119.3 |
| C6—C5—C7 | 116.17 (16) | C8—C9—H9 | 120.4 |
| C4—C5—C7 | 126.42 (17) | C10—C9—H9 | 120.4 |
| C1—C6—C5 | 121.36 (18) | C11—C10—H10 | 119.9 |
| N2—C7—C5 | 121.40 (16) | C9—C10—H10 | 119.9 |
| N2—C7—C8 | 119.59 (17) | C10—C11—H11 | 119.8 |
| C5—C7—C8 | 118.85 (16) | C12—C11—H11 | 119.8 |
| C9—C8—C13 | 120.34 (17) | C13—C12—H12 | 120.2 |
| C9—C8—C7 | 120.11 (17) | C11—C12—H12 | 120.2 |
| C13—C8—C7 | 119.25 (17) | C12—C13—H13 | 120.0 |
| C8—C9—C10 | 119.30 (18) | C8—C13—H13 | 120.0 |
| C11—C10—C9 | 120.29 (19) | N2—C14—H14A | 109.5 |
| C10—C11—C12 | 120.47 (18) | C15—C14—H14A | 109.5 |
| C13—C12—C11 | 119.6 (2) | N2—C14—H14B | 109.5 |
| C12—C13—C8 | 120.01 (19) | C15—C14—H14B | 109.5 |
| N2—C14—C15 | 110.70 (15) | H14A—C14—H14B | 108.1 |
| N3—C15—N1 | 122.88 (17) | N3—C16—H16A | 109.5 |
| N3—C15—C14 | 118.61 (17) | N3—C16—H16B | 109.5 |
| N1—C15—C14 | 118.50 (16) | H16A—C16—H16B | 109.5 |
| C15—N1—C4 | 125.00 (16) | N3—C16—H16C | 109.5 |
| C7—N2—O1 | 123.56 (15) | H16A—C16—H16C | 109.5 |
| C7—N2—C14 | 120.75 (16) | H16B—C16—H16C | 109.5 |
| O1—N2—C14 | 115.63 (14) | C15—N1—H1 | 117.9 (15) |
| C15—N3—C16 | 125.30 (18) | C4—N1—H1 | 115.7 (15) |
| O4—S1—O3 | 114.42 (10) | C15—N3—H3A | 116.0 (16) |
| O4—S1—O5 | 113.54 (10) | C16—N3—H3A | 118.7 (16) |
| O3—S1—O5 | 109.17 (9) | S1—O2—H2A | 114.0 (18) |
| H··· | ||||
| N3—H3 | 0.82 (2) | 1.95 (2) | 2.764 (2) | 171 (2) |
| N1—H1···O3i | 0.84 (2) | 1.93 (2) | 2.741 (2) | 162 (2) |
| O2—H2 | 0.81 (3) | 1.78 (3) | 2.583 (2) | 170 (3) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N3—H3 | 0.82 (2) | 1.95 (2) | 2.764 (2) | 171 (2) |
| N1—H1⋯O3i | 0.84 (2) | 1.93 (2) | 2.741 (2) | 162 (2) |
| O2—H2 | 0.81 (3) | 1.78 (3) | 2.583 (2) | 170 (3) |
Symmetry code: (i) .