Literature DB >> 22589885

Chlordiazepoxide dichloro-methane monosolvate.

Andreas Fischer1.   

Abstract

IN THE TITLE COMPOUND (SYSTEMATIC NAME: 7-chloro-2-methyl-amino-5-phenyl-3H-1,4-benzodiazepine 4-oxide dichloro-meth-ane monosolvate), C(16)H(14)ClN(3)O·CH(2)Cl(2), the seven-membered ring adopts a boat conformation with the CH(2) group as the prow and the two aromatic C atoms as the stern. The dihedral angle between the benzene rings is 75.25 (6)°. The crystal structure features centrosymmetric pairs of chlordiazepoxide mol-ecules linked by pairs of N-H⋯O hydrogen bonds, which generate R(2) (2)(12) loops.

Entities:  

Year:  2012        PMID: 22589885      PMCID: PMC3343976          DOI: 10.1107/S1600536812009695

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis of chlordiazepoxide, see: Sternbach et al. (1961 ▶). For the structure of chlordiazepoxide, see: Bertolasi et al. (1982 ▶). For the structure of a second polymorph of chlordiazepoxide, see: Singh et al. (1998 ▶). For the structure of chlordiazepoxide hydro­chloride, see: Herrnstadt et al. (1979 ▶). For the early history of benzopdiazepines, see: Sternbach (1979 ▶).

Experimental

Crystal data

C16H14ClN3O·CH2Cl2 M = 384.69 Triclinic, a = 7.8310 (12) Å b = 9.461 (2) Å c = 12.6947 (5) Å α = 94.284 (11)° β = 93.821 (9)° γ = 108.499 (13)° V = 885.4 (2) Å3 Z = 2 Mo Kα radiation μ = 0.53 mm−1 T = 173 K 0.60 × 0.33 × 0.04 mm

Data collection

Bruker–Nonius KappaCCD diffractometer Absorption correction: multi-scan SADABS (Sheldrick, 2003 ▶) T min = 0.763, T max = 0.979 20348 measured reflections 4040 independent reflections 3124 reflections with I > 2σ(I) R int = 0.034

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.104 S = 1.03 4040 reflections 221 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.76 e Å−3 Δρmin = −0.52 e Å−3 Data collection: COLLECT (Nonius, 1999 ▶); cell refinement: DIRAX (Duisenberg, 1992 ▶); data reduction: EVALCCD (Duisenberg et al., 2003 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg, 2007 ▶).; software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812009695/hb6668sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812009695/hb6668Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812009695/hb6668Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H14ClN3O·CH2Cl2Z = 2
Mr = 384.69F(000) = 396
Triclinic, P1Dx = 1.443 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 7.8310 (12) ÅCell parameters from 38 reflections
b = 9.461 (2) Åθ = 8.7–19.5°
c = 12.6947 (5) ŵ = 0.53 mm1
α = 94.284 (11)°T = 173 K
β = 93.821 (9)°Plate, colourless
γ = 108.499 (13)°0.60 × 0.33 × 0.04 mm
V = 885.4 (2) Å3
Bruker–Nonius KappaCCD diffractometer4040 independent reflections
Radiation source: fine-focus sealed tube3124 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.034
φ&ω scansθmax = 27.5°, θmin = 4.5°
Absorption correction: multi-scan SADABS (Sheldrick, 2003)h = −10→10
Tmin = 0.763, Tmax = 0.979k = −12→12
20348 measured reflectionsl = −15→16
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.040H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.104w = 1/[σ2(Fo2) + (0.0409P)2 + 0.7625P] where P = (Fo2 + 2Fc2)/3
S = 1.03(Δ/σ)max < 0.001
4040 reflectionsΔρmax = 0.76 e Å3
221 parametersΔρmin = −0.52 e Å3
1 restraint
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.4054 (3)0.0142 (2)0.68015 (14)0.0228 (4)
C20.4147 (3)−0.1283 (2)0.67919 (15)0.0233 (4)
C30.3620 (3)−0.2137 (2)0.76314 (15)0.0229 (4)
C40.3110 (2)−0.1489 (2)0.85106 (14)0.0219 (4)
C50.3146 (2)0.00119 (19)0.85985 (14)0.0183 (3)
C60.3543 (2)0.08072 (19)0.76981 (14)0.0188 (4)
C70.3392 (2)0.23116 (19)0.76213 (14)0.0193 (4)
C80.2418 (3)0.2605 (2)0.66676 (14)0.0213 (4)
C90.3090 (3)0.3890 (2)0.61483 (15)0.0251 (4)
C100.2113 (3)0.4097 (2)0.52552 (16)0.0335 (5)
C110.0461 (3)0.3048 (3)0.48835 (17)0.0375 (5)
C12−0.0217 (3)0.1780 (3)0.53961 (18)0.0374 (5)
C130.0762 (3)0.1547 (2)0.62793 (16)0.0300 (4)
C140.4974 (2)0.2983 (2)0.93612 (13)0.0189 (4)
C150.3509 (2)0.1940 (2)0.99178 (13)0.0186 (4)
C160.1763 (3)0.1635 (2)1.14472 (17)0.0334 (5)
C170.0152 (4)0.5580 (3)0.1687 (3)0.0561 (7)
Cl10.50033 (8)−0.20239 (6)0.57295 (4)0.03756 (16)
Cl20.04988 (9)0.72192 (8)0.10404 (6)0.0542 (2)
Cl30.19167 (10)0.57040 (9)0.26233 (6)0.0620 (2)
O10.39853 (18)0.47104 (13)0.84472 (10)0.0218 (3)
N10.4092 (2)0.33547 (16)0.84073 (11)0.0176 (3)
N20.2700 (2)0.05504 (17)0.95575 (12)0.0203 (3)
N30.3075 (2)0.25397 (18)1.08078 (12)0.0227 (3)
H10.43360.06790.61990.027*
H30.3613−0.31450.75990.027*
H40.2720−0.20760.90780.026*
H90.42140.46210.64070.030*
H100.25810.49630.48960.040*
H11−0.02060.32020.42750.045*
H12−0.13570.10660.51440.045*
H130.03030.06620.66210.036*
H14A0.56170.39060.98360.023*
H14B0.58620.24900.91590.023*
H16A0.06130.11561.10110.050*
H16B0.15780.22741.20430.050*
H16C0.22110.08631.17200.050*
H17A−0.09800.53800.20380.067*
H17B0.00010.47230.11510.067*
H3A0.379 (3)0.3395 (19)1.1074 (17)0.027*
U11U22U33U12U13U23
C10.0312 (10)0.0182 (9)0.0194 (9)0.0079 (8)0.0027 (7)0.0051 (7)
C20.0296 (10)0.0209 (9)0.0205 (9)0.0104 (8)0.0026 (7)0.0002 (7)
C30.0275 (10)0.0175 (9)0.0247 (9)0.0094 (8)−0.0012 (8)0.0030 (7)
C40.0233 (9)0.0206 (9)0.0214 (9)0.0059 (7)0.0006 (7)0.0067 (7)
C50.0156 (8)0.0184 (8)0.0192 (8)0.0037 (7)−0.0011 (7)0.0015 (6)
C60.0206 (9)0.0148 (8)0.0200 (9)0.0049 (7)−0.0020 (7)0.0013 (6)
C70.0209 (9)0.0169 (8)0.0197 (9)0.0055 (7)0.0009 (7)0.0028 (6)
C80.0288 (10)0.0192 (9)0.0178 (9)0.0117 (8)−0.0014 (7)−0.0008 (7)
C90.0343 (11)0.0206 (9)0.0209 (9)0.0100 (8)0.0001 (8)0.0017 (7)
C100.0522 (14)0.0285 (10)0.0247 (10)0.0199 (10)−0.0009 (9)0.0070 (8)
C110.0535 (15)0.0380 (12)0.0262 (11)0.0260 (11)−0.0128 (10)0.0004 (9)
C120.0385 (13)0.0344 (12)0.0349 (12)0.0114 (10)−0.0164 (10)−0.0044 (9)
C130.0361 (12)0.0227 (10)0.0292 (10)0.0087 (9)−0.0062 (9)0.0024 (8)
C140.0175 (9)0.0201 (9)0.0175 (8)0.0044 (7)−0.0028 (7)0.0023 (7)
C150.0166 (8)0.0221 (9)0.0165 (8)0.0058 (7)−0.0015 (7)0.0038 (7)
C160.0309 (11)0.0362 (11)0.0273 (11)0.0018 (9)0.0105 (9)−0.0007 (8)
C170.0338 (14)0.0492 (15)0.085 (2)0.0101 (12)0.0003 (13)0.0207 (14)
Cl10.0618 (4)0.0276 (3)0.0305 (3)0.0216 (2)0.0185 (2)0.00376 (19)
Cl20.0412 (3)0.0717 (5)0.0646 (4)0.0315 (3)0.0154 (3)0.0322 (3)
Cl30.0553 (4)0.0777 (5)0.0559 (4)0.0205 (4)0.0033 (3)0.0317 (4)
O10.0268 (7)0.0131 (6)0.0243 (7)0.0060 (5)−0.0019 (5)−0.0003 (5)
N10.0189 (7)0.0153 (7)0.0183 (7)0.0051 (6)0.0001 (6)0.0026 (5)
N20.0203 (8)0.0206 (8)0.0185 (7)0.0048 (6)0.0013 (6)0.0018 (6)
N30.0214 (8)0.0231 (8)0.0203 (8)0.0036 (7)0.0013 (6)−0.0015 (6)
C1—C21.372 (3)C16—N31.451 (3)
C1—C61.402 (2)C17—Cl31.730 (3)
C2—C31.391 (3)C17—Cl21.762 (3)
C2—Cl11.7428 (19)O1—N11.3090 (18)
C3—C41.376 (3)C1—H10.9500
C4—C51.407 (2)C3—H30.9500
C5—N21.393 (2)C4—H40.9500
C5—C61.413 (2)C9—H90.9500
C6—C71.475 (2)C10—H100.9500
C7—N11.306 (2)C11—H110.9500
C7—C81.478 (2)C12—H120.9500
C8—C131.394 (3)C13—H130.9500
C8—C91.396 (3)C14—H14A0.9900
C9—C101.386 (3)C14—H14B0.9900
C10—C111.384 (3)C16—H16A0.9800
C11—C121.380 (3)C16—H16B0.9800
C12—C131.387 (3)C16—H16C0.9800
C14—N11.474 (2)C17—H17A0.9900
C14—C151.511 (2)C17—H17B0.9900
C15—N21.297 (2)N3—H3A0.854 (16)
C15—N31.338 (2)
C2—C1—C6120.20 (16)C6—C1—H1119.9
C1—C2—C3121.22 (17)C4—C3—H3120.7
C1—C2—Cl1119.68 (14)C2—C3—H3120.7
C3—C2—Cl1119.07 (14)C3—C4—H4118.8
C4—C3—C2118.55 (16)C5—C4—H4118.8
C3—C4—C5122.33 (16)C10—C9—H9120.1
N2—C5—C4116.32 (15)C8—C9—H9120.1
N2—C5—C6126.13 (16)C11—C10—H10119.8
C4—C5—C6117.48 (16)C9—C10—H10119.8
C1—C6—C5119.75 (16)C12—C11—H11120.0
C1—C6—C7116.61 (15)C10—C11—H11120.0
C5—C6—C7123.60 (16)C11—C12—H12120.0
N1—C7—C6119.34 (16)C13—C12—H12120.0
N1—C7—C8121.14 (15)C12—C13—H13119.8
C6—C7—C8119.51 (15)C8—C13—H13119.8
C13—C8—C9119.24 (17)N1—C14—H14A110.2
C13—C8—C7118.08 (16)C15—C14—H14A110.2
C9—C8—C7122.68 (17)N1—C14—H14B110.2
C10—C9—C8119.88 (19)C15—C14—H14B110.2
C11—C10—C9120.4 (2)H14A—C14—H14B108.5
C12—C11—C10120.04 (19)N3—C16—H16A109.5
C11—C12—C13120.1 (2)N3—C16—H16B109.5
C12—C13—C8120.31 (19)H16A—C16—H16B109.5
N1—C14—C15107.42 (14)N3—C16—H16C109.5
N2—C15—N3121.51 (16)H16A—C16—H16C109.5
N2—C15—C14122.57 (16)H16B—C16—H16C109.5
N3—C15—C14115.91 (16)Cl3—C17—H17A109.0
Cl3—C17—Cl2112.88 (15)Cl2—C17—H17A109.0
C7—N1—O1124.88 (15)Cl3—C17—H17B109.0
C7—N1—C14118.94 (14)Cl2—C17—H17B109.0
O1—N1—C14116.05 (13)H17A—C17—H17B107.8
C15—N2—C5118.83 (15)C15—N3—H3A117.0 (15)
C15—N3—C16121.24 (16)C16—N3—H3A119.7 (15)
C2—C1—H1119.9
D—H···AD—HH···AD···AD—H···A
N3—H3A···O1i0.85 (2)2.08 (2)2.916 (2)166 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N3—H3A⋯O1i0.85 (2)2.08 (2)2.916 (2)166 (2)

Symmetry code: (i) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Solid-state characterization of chlordiazepoxide polymorphs.

Authors:  D Singh; P V Marshall; L Shields; P York
Journal:  J Pharm Sci       Date:  1998-05       Impact factor: 3.534

3.  The benzodiazepine story.

Authors:  L H Sternbach
Journal:  J Med Chem       Date:  1979-01       Impact factor: 7.446

  3 in total
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1.  New Saccharin Salt of Chlordiazepoxide: Structural and Physicochemical Examination.

Authors:  Anna Lech; Patrycja Garbacz; Artur Sikorski; Maria Gazda; Marek Wesolowski
Journal:  Int J Mol Sci       Date:  2022-10-10       Impact factor: 6.208

2.  A hydrogen sulfate salt of chlordiazepoxide.

Authors:  Veronica Diesen; Cláudio Lousada; Andreas Fischer
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-06-13
  2 in total

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