Literature DB >> 22771986

Rethinking the role of TFIIF in transcript initiation by RNA polymerase II.

Donal S Luse1.   

Abstract

TFIIF is considered to be a general transcription factor, based on the fact that it is essential for assembly of RNA polymerase II preinitiation complexes on fully double-stranded templates in vitro. Existing models assign various tasks to TFIIF during preinitiation complex formation and transcript initiation. Recent results do not support all aspects of those models but they do emphasize the significance of the interaction of TFIIF and TFIIB. Other recent findings raise the possibility that a fraction of RNA polymerase II transcription complex assembly proceeds through a pathway that is independent of TFIIF.

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Year:  2012        PMID: 22771986      PMCID: PMC3654762          DOI: 10.4161/trns.20725

Source DB:  PubMed          Journal:  Transcription        ISSN: 2154-1272


  48 in total

1.  Architecture of the yeast RNA polymerase II open complex and regulation of activity by TFIIF.

Authors:  James Fishburn; Steven Hahn
Journal:  Mol Cell Biol       Date:  2011-10-24       Impact factor: 4.272

2.  Functions of the N- and C-terminal domains of human RAP74 in transcriptional initiation, elongation, and recycling of RNA polymerase II.

Authors:  L Lei; D Ren; A Finkelstein; Z F Burton
Journal:  Mol Cell Biol       Date:  1998-04       Impact factor: 4.272

3.  Reconstitution of the transcription factor TFIIH: assignment of functions for the three enzymatic subunits, XPB, XPD, and cdk7.

Authors:  F Tirode; D Busso; F Coin; J M Egly
Journal:  Mol Cell       Date:  1999-01       Impact factor: 17.970

4.  Structure of an RNA polymerase II-TFIIB complex and the transcription initiation mechanism.

Authors:  Xin Liu; David A Bushnell; Dong Wang; Guillermo Calero; Roger D Kornberg
Journal:  Science       Date:  2009-11-12       Impact factor: 47.728

5.  Functional analysis of Drosophila factor 5 (TFIIF), a general transcription factor.

Authors:  D D Kephart; B Q Wang; Z F Burton; D H Price
Journal:  J Biol Chem       Date:  1994-05-06       Impact factor: 5.157

6.  Domain structure of a human general transcription initiation factor, TFIIF.

Authors:  M Yonaha; T Aso; Y Kobayashi; H Vasavada; Y Yasukochi; S M Weissman; S Kitajima
Journal:  Nucleic Acids Res       Date:  1993-01-25       Impact factor: 16.971

7.  Isolation of three proteins that bind to mammalian RNA polymerase II.

Authors:  M Sopta; R W Carthew; J Greenblatt
Journal:  J Biol Chem       Date:  1985-08-25       Impact factor: 5.157

8.  Functions of Saccharomyces cerevisiae TFIIF during transcription start site utilization.

Authors:  Denys A Khaperskyy; Michelle L Ammerman; Robert C Majovski; Alfred S Ponticelli
Journal:  Mol Cell Biol       Date:  2008-03-24       Impact factor: 4.272

9.  RAP30/74: a general initiation factor that binds to RNA polymerase II.

Authors:  Z F Burton; M Killeen; M Sopta; L G Ortolan; J Greenblatt
Journal:  Mol Cell Biol       Date:  1988-04       Impact factor: 4.272

10.  Architecture of the RNA polymerase II-TFIIF complex revealed by cross-linking and mass spectrometry.

Authors:  Zhuo Angel Chen; Anass Jawhari; Lutz Fischer; Claudia Buchen; Salman Tahir; Tomislav Kamenski; Morten Rasmussen; Laurent Lariviere; Jimi-Carlo Bukowski-Wills; Michael Nilges; Patrick Cramer; Juri Rappsilber
Journal:  EMBO J       Date:  2010-01-21       Impact factor: 11.598

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  11 in total

Review 1.  RNA polymerase II transcription elongation control.

Authors:  Jiannan Guo; David H Price
Journal:  Chem Rev       Date:  2013-08-06       Impact factor: 60.622

Review 2.  The RNA polymerase II preinitiation complex. Through what pathway is the complex assembled?

Authors:  Donal S Luse
Journal:  Transcription       Date:  2014

3.  Super elongation complex contains a TFIIF-related subcomplex.

Authors:  Bruce A Knutson; Marissa L Smith; Nancy Walker-Kopp; Xia Xu
Journal:  Transcription       Date:  2016-05-25

4.  Transcription Factor hDREF Is a Novel SUMO E3 Ligase of Mi2α.

Authors:  Daisuke Yamashita; Takanobu Moriuchi; Takashi Osumi; Fumiko Hirose
Journal:  J Biol Chem       Date:  2016-04-11       Impact factor: 5.157

5.  Chemical perturbation of an intrinsically disordered region of TFIID distinguishes two modes of transcription initiation.

Authors:  Zhengjian Zhang; Zarko Boskovic; Mahmud M Hussain; Wenxin Hu; Carla Inouye; Han-Je Kim; A Katherine Abole; Mary K Doud; Timothy A Lewis; Angela N Koehler; Stuart L Schreiber; Robert Tjian
Journal:  Elife       Date:  2015-08-28       Impact factor: 8.140

6.  Regulation of RNA polymerase II termination by phosphorylation of Gdown1.

Authors:  Jiannan Guo; Michael E Turek; David H Price
Journal:  J Biol Chem       Date:  2014-03-14       Impact factor: 5.157

7.  Relationships of RNA polymerase II genetic interactors to transcription start site usage defects and growth in Saccharomyces cerevisiae.

Authors:  Huiyan Jin; Craig D Kaplan
Journal:  G3 (Bethesda)       Date:  2014-11-06       Impact factor: 3.154

8.  Gdown1 Associates Efficiently with RNA Polymerase II after Promoter Clearance and Displaces TFIIF during Transcript Elongation.

Authors:  Elizabeth DeLaney; Donal S Luse
Journal:  PLoS One       Date:  2016-10-07       Impact factor: 3.240

9.  An RNA polymerase II-associated TFIIF-like complex is indispensable for SL RNA gene transcription in Trypanosoma brucei.

Authors:  Ankita Srivastava; Nitika Badjatia; Ju Huck Lee; Bing Hao; Arthur Günzl
Journal:  Nucleic Acids Res       Date:  2018-02-28       Impact factor: 16.971

10.  The neurodegenerative diseases ALS and SMA are linked at the molecular level via the ASC-1 complex.

Authors:  Binkai Chi; Jeremy D O'Connell; Alexander D Iocolano; Jordan A Coady; Yong Yu; Jaya Gangopadhyay; Steven P Gygi; Robin Reed
Journal:  Nucleic Acids Res       Date:  2018-12-14       Impact factor: 16.971

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