Literature DB >> 22765502

From classification to epilepsy ontology and informatics.

Guo-Qiang Zhang1, Satya S Sahoo, Samden D Lhatoo.   

Abstract

The 2010 International League Against Epilepsy (ILAE) classification and terminology commission report proposed a much needed departure from previous classifications to incorporate advances in molecular biology, neuroimaging, and genetics. It proposed an interim classification and defined two key requirements that need to be satisfied. The first is the ability to classify epilepsy in dimensions according to a variety of purposes including clinical research, patient care, and drug discovery. The second is the ability of the classification system to evolve with new discoveries. Multidimensionality and flexibility are crucial to the success of any future classification. In addition, a successful classification system must play a central role in the rapidly growing field of epilepsy informatics. An epilepsy ontology, based on classification, will allow information systems to facilitate data-intensive studies and provide a proven route to meeting the two foregoing key requirements. Epilepsy ontology will be a structured terminology system that accommodates proposed and evolving ILAE classifications, the National Institutes of Health/National Institute of Neurological Disorders and Stroke (NIH/NINDS) Common Data Elements, the International Classification of Diseases (ICD) systems and explicitly specifies all known relationships between epilepsy concepts in a proper framework. This will aid evidence-based epilepsy diagnosis, investigation, treatment and research for a diverse community of clinicians and researchers. Benefits range from systematization of electronic patient records to multimodal data repositories for research and training manuals for those involved in epilepsy care. Given the complexity, heterogeneity, and pace of research advances in the epilepsy domain, such an ontology must be collaboratively developed by key stakeholders in the epilepsy community and experts in knowledge engineering and computer science. Wiley Periodicals, Inc.
© 2012 International League Against Epilepsy.

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Year:  2012        PMID: 22765502      PMCID: PMC3398997          DOI: 10.1111/j.1528-1167.2012.03556.x

Source DB:  PubMed          Journal:  Epilepsia        ISSN: 0013-9580            Impact factor:   5.864


  18 in total

1.  Classification and epilepsy: the future awaits.

Authors:  Anne T Berg
Journal:  Epilepsy Curr       Date:  2011-09       Impact factor: 7.500

Review 2.  The new ILAE report on terminology and concepts for organization of epileptic seizures: a clinician's critical view and contribution.

Authors:  Chrysostomos P Panayiotopoulos
Journal:  Epilepsia       Date:  2011-10-17       Impact factor: 5.864

Review 3.  The practical impact of ontologies on biomedical informatics.

Authors:  J J Cimino; X Zhu
Journal:  Yearb Med Inform       Date:  2006

4.  Biomedical ontologies in action: role in knowledge management, data integration and decision support.

Authors:  O Bodenreider
Journal:  Yearb Med Inform       Date:  2008

Review 5.  The etiologic classification of epilepsy.

Authors:  Simon D Shorvon
Journal:  Epilepsia       Date:  2011-03-30       Impact factor: 5.864

6.  Standards for epidemiologic studies and surveillance of epilepsy.

Authors:  David J Thurman; Ettore Beghi; Charles E Begley; Anne T Berg; Jeffrey R Buchhalter; Ding Ding; Dale C Hesdorffer; W Allen Hauser; Lewis Kazis; Rosemarie Kobau; Barbara Kroner; David Labiner; Kore Liow; Giancarlo Logroscino; Marco T Medina; Charles R Newton; Karen Parko; Angelia Paschal; Pierre-Marie Preux; Josemir W Sander; Anbesaw Selassie; William Theodore; Torbjörn Tomson; Samuel Wiebe
Journal:  Epilepsia       Date:  2011-09       Impact factor: 5.864

7.  Revised terminology and concepts for organization of seizures and epilepsies: report of the ILAE Commission on Classification and Terminology, 2005-2009.

Authors:  Anne T Berg; Samuel F Berkovic; Martin J Brodie; Jeffrey Buchhalter; J Helen Cross; Walter van Emde Boas; Jerome Engel; Jacqueline French; Tracy A Glauser; Gary W Mathern; Solomon L Moshé; Douglas Nordli; Perrine Plouin; Ingrid E Scheffer
Journal:  Epilepsia       Date:  2010-02-26       Impact factor: 5.864

8.  Revising the ICD-10 codes for epilepsy and seizures.

Authors:  Donna C Bergen; Ettore Beghi; Marco T Medina
Journal:  Epilepsia       Date:  2012-07       Impact factor: 5.864

9.  Proposal for revised clinical and electroencephalographic classification of epileptic seizures. From the Commission on Classification and Terminology of the International League Against Epilepsy.

Authors: 
Journal:  Epilepsia       Date:  1981-08       Impact factor: 5.864

10.  The Gene Ontology: enhancements for 2011.

Authors: 
Journal:  Nucleic Acids Res       Date:  2011-11-18       Impact factor: 16.971

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  7 in total

1.  MEDCIS: Multi-Modality Epilepsy Data Capture and Integration System.

Authors:  Guo-Qiang Zhang; Licong Cui; Samden Lhatoo; Stephan U Schuele; Satya S Sahoo
Journal:  AMIA Annu Symp Proc       Date:  2014-11-14

2.  EpiDEA: extracting structured epilepsy and seizure information from patient discharge summaries for cohort identification.

Authors:  Licong Cui; Alireza Bozorgi; Samden D Lhatoo; Guo-Qiang Zhang; Satya S Sahoo
Journal:  AMIA Annu Symp Proc       Date:  2012-11-03

3.  OPIC: Ontology-driven Patient Information Capturing system for epilepsy.

Authors:  Satya S Sahoo; Meng Zhao; Lingyun Luo; Alireza Bozorgi; Deepak Gupta; Samden D Lhatoo; Guo-Qiang Zhang
Journal:  AMIA Annu Symp Proc       Date:  2012-11-03

4.  Merging Ontology Navigation with Query Construction for Web-based Medicare Data Exploration.

Authors:  Guo-Qiang Zhang; Licong Cui; Joe Teagno; David Kaebler; Siran Koroukian; Rong Xu
Journal:  AMIA Jt Summits Transl Sci Proc       Date:  2013-03-18

5.  Design and Implementation of a Comprehensive Web-based Survey for Ovarian Cancer Survivorship with an Analysis of Prediagnosis Symptoms via Text Mining.

Authors:  Jiayang Sun; Kath M Bogie; Joe Teagno; Yu-Hsiang Sam Sun; Rebecca R Carter; Licong Cui; Guo-Qiang Zhang
Journal:  Cancer Inform       Date:  2015-03-23

6.  Are Randomized Controlled Trials the (G)old Standard? From Clinical Intelligence to Prescriptive Analytics.

Authors:  Sven Van Poucke; Michiel Thomeer; John Heath; Milan Vukicevic
Journal:  J Med Internet Res       Date:  2016-07-06       Impact factor: 5.428

Review 7.  Classifying epilepsy pragmatically: Past, present, and future.

Authors:  Nathan A Shlobin; Gagandeep Singh; Charles R Newton; Josemir W Sander
Journal:  J Neurol Sci       Date:  2021-05-29       Impact factor: 4.553

  7 in total

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