Literature DB >> 22765234

Stereochemical outcome at four stereogenic centers during conversion of prephenate to tetrahydrotyrosine by BacABGF in the bacilysin pathway.

Jared B Parker1, Christopher T Walsh.   

Abstract

The first four enzymes of the bacilysin antibiotic pathway, BacABGF, convert prephenate to a tetrahydrotyrosine (H(4)Tyr) diastereomer on the way to the anticapsin warhead of the dipeptide antibiotic. BacB takes the BacA product endocyclic-Δ(4),Δ(8)-7R-dihydrohydroxyphenylpyruvate (en-H(2)HPP) and generates a mixture of 3E- and 3Z-olefins of the exocyclic-Δ(3),Δ(5)-dihydrohydroxyphenylpyruvate (ex-H(2)HPP). The NADH-utilizing BacG then catalyzes a conjugate reduction, adding a pro-S hydride equivalent to C(4) to yield tetrahydrohydroxyphenylpyruvate (H(4)HPP), a transamination away (via BacF) from 2S-H(4)Tyr. Incubations of the pathway enzymes in D(2)O yield deuterium incorporation at C(8) from BacA and then C(9) from BacB action. By (1)H NMR analysis of samples of H(4)Tyr, the stereochemistry at C(4), C(8), and C(9) can be assigned. BacG (followed by BacF) converts 3E-ex-H(2)HPP to 2S,4R,7R-H(4)Tyr. The 3Z isomer is instead reduced and transaminated to the opposite diastereomer at C(4), 2S,4S,7R-H(4)Tyr. Given that bacilysin has the 2S,4S stereochemistry in its anticapsin moiety, it is likely that the 2S,4S-H(4)Tyr is the diastereomer "on pathway". NMR determination of the stereochemistry of the CHD samples at C(8) and C(9) allows assignment of all stereogenic centers (except C(3)) in this unusual tetrahydro-aromatic amino acid building block, giving insights into and constraints on the BacA, BacB, and BacG mechanisms.

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Year:  2012        PMID: 22765234      PMCID: PMC3448026          DOI: 10.1021/bi3006362

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  24 in total

1.  NMR Chemical Shifts of Common Laboratory Solvents as Trace Impurities.

Authors:  Hugo E. Gottlieb; Vadim Kotlyar; Abraham Nudelman
Journal:  J Org Chem       Date:  1997-10-17       Impact factor: 4.354

2.  Chorismate mutase-prephenate dehydratase. Partial purification and properties of the enzyme from Salmonella typhimurium.

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Journal:  Biochemistry       Date:  1969-01       Impact factor: 3.162

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Journal:  Biochim Biophys Acta       Date:  1970-09-16

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Authors:  G Ottolina; S Riva; G Carrea; B Danieli; A F Buckmann
Journal:  Biochim Biophys Acta       Date:  1989-10-05

5.  Olefin isomerization regiochemistries during tandem action of BacA and BacB on prephenate in bacilysin biosynthesis.

Authors:  Jared B Parker; Christopher T Walsh
Journal:  Biochemistry       Date:  2012-04-06       Impact factor: 3.162

6.  Investigation of anticapsin biosynthesis reveals a four-enzyme pathway to tetrahydrotyrosine in Bacillus subtilis.

Authors:  Sarah A Mahlstedt; Christopher T Walsh
Journal:  Biochemistry       Date:  2010-02-09       Impact factor: 3.162

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Authors:  S Milewski; H Chmara; E Borowski
Journal:  Drugs Exp Clin Res       Date:  1986

8.  13C isotope effect on the reaction catalyzed by prephenate dehydratase.

Authors:  Jeremy Van Vleet; Andreas Kleeb; Peter Kast; Donald Hilvert; W W Cleland
Journal:  Biochim Biophys Acta       Date:  2009-11-27

9.  Inhibition of glucosamine synthase by bacilysin and anticapsin.

Authors:  H Chmara
Journal:  J Gen Microbiol       Date:  1985-02

Review 10.  Phenylpropanoid biosynthesis.

Authors:  Thomas Vogt
Journal:  Mol Plant       Date:  2009-12-24       Impact factor: 13.164

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  5 in total

Review 1.  Nonproteinogenic amino acid building blocks for nonribosomal peptide and hybrid polyketide scaffolds.

Authors:  Christopher T Walsh; Robert V O'Brien; Chaitan Khosla
Journal:  Angew Chem Int Ed Engl       Date:  2013-05-31       Impact factor: 15.336

2.  Bacilysin from Bacillus amyloliquefaciens FZB42 has specific bactericidal activity against harmful algal bloom species.

Authors:  Liming Wu; Huijun Wu; Lina Chen; Shanshan Xie; Haoyu Zang; Rainer Borriss; Xuewen Gao
Journal:  Appl Environ Microbiol       Date:  2014-09-26       Impact factor: 4.792

3.  Structural insights into the catalytic mechanism of Bacillus subtilis BacF.

Authors:  Ashish Deshmukh; Balasubramanian Gopal
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2020-03-03       Impact factor: 1.056

Review 4.  Biosynthesis, Molecular Regulation, and Application of Bacilysin Produced by Bacillus Species.

Authors:  Tarequl Islam; Muhammad Fazle Rabbee; Jinhee Choi; Kwang-Hyun Baek
Journal:  Metabolites       Date:  2022-04-27

5.  Action and timing of BacC and BacD in the late stages of biosynthesis of the dipeptide antibiotic bacilysin.

Authors:  Jared B Parker; Christopher T Walsh
Journal:  Biochemistry       Date:  2013-01-23       Impact factor: 3.162

  5 in total

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