Literature DB >> 22759303

Interactions between evolutionary processes at high mutation rates.

Thomas E Keller1, Claus O Wilke, James J Bull.   

Abstract

Evolution at high mutation rates is minimally affected by six processes: mutation-selection balance, error catastrophes, Muller's Ratchet, robustness and compensatory evolution, and clonal interference. Including all of these processes in a tractable, analytical model is difficult, but they can be captured in simulations that utilize realistic genotype-phenotype-fitness maps, as done here by modeling RNA folding. Subjecting finite, asexual populations to a range of mutation rates revealed simple criteria that predict when particular evolutionary processes are important. Populations were initiated with a genotype encoding the most fit phenotype. When purifying selection was strong relative to mutation, the initial genotype was replaced by one more mutationally robust, and the maximally fit phenotype was maintained in a mutation-selection balance where the deleterious mutation rate determined mean fitness. With weaker purifying selection, the most fit genotypes were lost. Although loss of the best genotype was ongoing and might have led to a progressive fitness decline, continual compensatory evolution led to an approximate fitness equilibration. Per total genomic mutation rate, mean fitness was similar for strong and weak purifying selection. These results represent a first step at separating interactions between evolutionary processes at high mutation rate, but additional theory is needed to interpret some outcomes.
© 2012 The Author(s).

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Year:  2012        PMID: 22759303      PMCID: PMC3389706          DOI: 10.1111/j.1558-5646.2012.01596.x

Source DB:  PubMed          Journal:  Evolution        ISSN: 0014-3820            Impact factor:   3.694


  44 in total

1.  Neutral evolution of mutational robustness.

Authors:  E van Nimwegen; J P Crutchfield; M Huynen
Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-17       Impact factor: 11.205

2.  Mutation accumulation in growing asexual lineages.

Authors:  J F Fontanari; A Colato; R S Howard
Journal:  Phys Rev Lett       Date:  2003-11-18       Impact factor: 9.161

3.  Mutational robustness of ribosomal protein genes.

Authors:  Peter A Lind; Otto G Berg; Dan I Andersson
Journal:  Science       Date:  2010-11-05       Impact factor: 47.728

4.  Thermodynamic prediction of protein neutrality.

Authors:  Jesse D Bloom; Jonathan J Silberg; Claus O Wilke; D Allan Drummond; Christoph Adami; Frances H Arnold
Journal:  Proc Natl Acad Sci U S A       Date:  2005-01-11       Impact factor: 11.205

5.  Mutational interference and the progression of Muller's ratchet when mutations have a broad range of deleterious effects.

Authors:  R Jonas Söderberg; Otto G Berg
Journal:  Genetics       Date:  2007-08-24       Impact factor: 4.562

6.  Compensating for our load of mutations: freezing the meltdown of small populations.

Authors:  A Poon; S P Otto
Journal:  Evolution       Date:  2000-10       Impact factor: 3.694

7.  The accumulation of deleterious genes in a population--Muller's Ratchet.

Authors:  J Haigh
Journal:  Theor Popul Biol       Date:  1978-10       Impact factor: 1.570

8.  Understanding the evolutionary fate of finite populations: the dynamics of mutational effects.

Authors:  Olin K Silander; Olivier Tenaillon; Lin Chao
Journal:  PLoS Biol       Date:  2007-04       Impact factor: 8.029

9.  Compensatory mutations cause excess of antagonistic epistasis in RNA secondary structure folding.

Authors:  Claus O Wilke; Richard E Lenski; Christoph Adami
Journal:  BMC Evol Biol       Date:  2003-02-05       Impact factor: 3.260

10.  Quasispecies theory in the context of population genetics.

Authors:  Claus O Wilke
Journal:  BMC Evol Biol       Date:  2005-08-17       Impact factor: 3.260

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  2 in total

1.  Replaying the tape of life: quantification of the predictability of evolution.

Authors:  Alexander E Lobkovsky; Eugene V Koonin
Journal:  Front Genet       Date:  2012-11-26       Impact factor: 4.599

2.  Phenotypic determinism and contingency in the evolution of hypothetical tree-like organisms.

Authors:  Tomonobu Nonoyama; Satoshi Chiba
Journal:  PLoS One       Date:  2019-10-31       Impact factor: 3.240

  2 in total

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