Literature DB >> 22752165

Distance-decay relationships partially determine diversity patterns of phyllosphere bacteria on Tamarix trees across the Sonoran Desert [corrected].

Omri M Finkel1, Adrien Y Burch, Tal Elad, Susan M Huse, Steven E Lindow, Anton F Post, Shimshon Belkin.   

Abstract

Dispersal limitation in phyllosphere communities was measured on the leaf surfaces of salt-excreting Tamarix trees, which offer unique, discrete habitats for microbial assemblages. We employed 16S rRNA gene pyrosequencing to measure bacterial community dissimilarity on leaves of spatially dispersed Tamarix specimens in sites with uniform climatic conditions across the Sonoran Desert in the Southwestern United States. Our analyses revealed diverse bacterial communities with four dominant phyla that exhibited differential effects of environmental and geographic variables. Geographical distance was the most important parameter that affected community composition, particularly that of betaproteobacteria, which displayed a statistically significant, distance-decay relationship.

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Year:  2012        PMID: 22752165      PMCID: PMC3416633          DOI: 10.1128/AEM.00888-12

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  22 in total

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Authors:  Mitchell L Sogin; Hilary G Morrison; Julie A Huber; David Mark Welch; Susan M Huse; Phillip R Neal; Jesus M Arrieta; Gerhard J Herndl
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4.  Drop-size soda lakes: transient microbial habitats on a salt-secreting desert tree.

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5.  Pyrosequencing-based assessment of soil pH as a predictor of soil bacterial community structure at the continental scale.

Authors:  Christian L Lauber; Micah Hamady; Rob Knight; Noah Fierer
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Authors:  Patrick D Schloss; Sarah L Westcott; Thomas Ryabin; Justine R Hall; Martin Hartmann; Emily B Hollister; Ryan A Lesniewski; Brian B Oakley; Donovan H Parks; Courtney J Robinson; Jason W Sahl; Blaz Stres; Gerhard G Thallinger; David J Van Horn; Carolyn F Weber
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7.  Site and plant species are important determinants of the Methylobacterium community composition in the plant phyllosphere.

Authors:  Claudia Knief; Alban Ramette; Lisa Frances; Carlos Alonso-Blanco; Julia A Vorholt
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8.  Ironing out the wrinkles in the rare biosphere through improved OTU clustering.

Authors:  Susan M Huse; David Mark Welch; Hilary G Morrison; Mitchell L Sogin
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9.  Exploring microbial diversity and taxonomy using SSU rRNA hypervariable tag sequencing.

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10.  The pervasive effects of an antibiotic on the human gut microbiota, as revealed by deep 16S rRNA sequencing.

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  33 in total

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2.  Relationships between phyllosphere bacterial communities and plant functional traits in a neotropical forest.

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Journal:  Proc Natl Acad Sci U S A       Date:  2014-09-15       Impact factor: 11.205

3.  Bacterial community assemblages associated with the phyllosphere, dermosphere, and rhizosphere of tree species of the Atlantic forest are host taxon dependent.

Authors:  Marcio R Lambais; Adriano R Lucheta; David E Crowley
Journal:  Microb Ecol       Date:  2014-06-03       Impact factor: 4.552

4.  Phyllosphere Fungal Communities Differentiate More Thoroughly than Bacterial Communities Along an Elevation Gradient.

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5.  Scale-Dependent Influences of Distance and Vegetation on the Composition of Aboveground and Belowground Tropical Fungal Communities.

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6.  Diverse microhabitats experienced by Halomonas variabilis on salt-secreting leaves.

Authors:  Adrien Y Burch; Omri M Finkel; Juliana K Cho; Shimshon Belkin; Steven E Lindow
Journal:  Appl Environ Microbiol       Date:  2012-11-16       Impact factor: 4.792

7.  Desert Perennial Shrubs Shape the Microbial-Community Miscellany in Laimosphere and Phyllosphere Space.

Authors:  Varsik Martirosyan; Adrian Unc; Gad Miller; Tirza Doniger; Chaim Wachtel; Yosef Steinberger
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8.  Metagenomic Signatures of Bacterial Adaptation to Life in the Phyllosphere of a Salt-Secreting Desert Tree.

Authors:  Omri M Finkel; Tom O Delmont; Anton F Post; Shimshon Belkin
Journal:  Appl Environ Microbiol       Date:  2016-04-18       Impact factor: 4.792

9.  Biogeographic Patterns Between Bacterial Phyllosphere Communities of the Southern Magnolia (Magnolia grandiflora) in a Small Forest.

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Journal:  Microb Ecol       Date:  2016-02-16       Impact factor: 4.552

10.  Temporal and Spatial Changes in Phyllosphere Microbiome of Acacia Trees Growing in Arid Environments.

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