Literature DB >> 27450478

Desert Perennial Shrubs Shape the Microbial-Community Miscellany in Laimosphere and Phyllosphere Space.

Varsik Martirosyan1,2, Adrian Unc3, Gad Miller1, Tirza Doniger1, Chaim Wachtel1, Yosef Steinberger4.   

Abstract

Microbial function, composition, and distribution play a fundamental role in ecosystem ecology. The interaction between desert plants and their associated microbes is expected to greatly affect their response to changes in this harsh environment. Using comparative analyses, we studied the impact of three desert shrubs, Atriplex halimus (A), Artemisia herba-alba (AHA), and Hammada scoparia (HS), on soil- and leaf-associated microbial communities. DNA extracted from the leaf surface and soil samples collected beneath the shrubs were used to study associated microbial diversity using a sequencing survey of variable regions of bacterial 16S rRNA and fungal ribosomal internal transcribed spacer (ITS1). We found that the composition of bacterial and fungal orders is plant-type-specific, indicating that each plant type provides a suitable and unique microenvironment. The different adaptive ecophysiological properties of the three plant species and the differential effect on their associated microbial composition point to the role of adaptation in the shaping of microbial diversity. Overall, our findings suggest a link between plant ecophysiological adaptation as a "temporary host" and the biotic-community parameters in extreme xeric environments.

Entities:  

Keywords:  Desert ecosystem; Microbial diversity; Next-generation sequencing; Phyllosphere; Plant ecophysiological adaptation

Mesh:

Substances:

Year:  2016        PMID: 27450478     DOI: 10.1007/s00248-016-0822-9

Source DB:  PubMed          Journal:  Microb Ecol        ISSN: 0095-3628            Impact factor:   4.552


  39 in total

1.  Microfungal-community diversity in Zygophyllum dumosum and Hammada scoparia root zones in the northern Negev Desert.

Authors:  Jun Yu; Isabella Grishkan; Yosef Steinberger
Journal:  J Basic Microbiol       Date:  2012-06-26       Impact factor: 2.281

2.  Microbial community shifts influence patterns in tropical forest nitrogen fixation.

Authors:  Sasha C Reed; Alan R Townsend; Cory C Cleveland; Diana R Nemergut
Journal:  Oecologia       Date:  2010-05-09       Impact factor: 3.225

3.  Drop-size soda lakes: transient microbial habitats on a salt-secreting desert tree.

Authors:  Noga Qvit-Raz; Edouard Jurkevitch; Shimshon Belkin
Journal:  Genetics       Date:  2008-02-03       Impact factor: 4.562

4.  Are biological effects of desert shrubs more important than physical effects on soil microorganisms?

Authors:  Naama Berg; Yosef Steinberger
Journal:  Microb Ecol       Date:  2010-01       Impact factor: 4.552

5.  Actinobacteria within soils: capacities for mutualism, symbiosis and pathogenesis.

Authors:  Hilde Schrempf
Journal:  FEMS Microbiol Lett       Date:  2013-05       Impact factor: 2.742

6.  The ecology of the phyllosphere: geographic and phylogenetic variability in the distribution of bacteria on tree leaves.

Authors:  Amanda J Redford; Robert M Bowers; Rob Knight; Yan Linhart; Noah Fierer
Journal:  Environ Microbiol       Date:  2010-11       Impact factor: 5.491

Review 7.  Prokaryotes: the unseen majority.

Authors:  W B Whitman; D C Coleman; W J Wiebe
Journal:  Proc Natl Acad Sci U S A       Date:  1998-06-09       Impact factor: 11.205

8.  Population genetic structure and origins of Native Hawaiians in the multiethnic cohort study.

Authors:  Sung K Kim; Christopher R Gignoux; Jeffrey D Wall; Annette Lum-Jones; Hansong Wang; Christopher A Haiman; Gary K Chen; Brian E Henderson; Laurence N Kolonel; Loic Le Marchand; Daniel O Stram; Richa Saxena; Iona Cheng
Journal:  PLoS One       Date:  2012-11-07       Impact factor: 3.240

Review 9.  Analysis of plant microbe interactions in the era of next generation sequencing technologies.

Authors:  Claudia Knief
Journal:  Front Plant Sci       Date:  2014-05-21       Impact factor: 5.753

10.  PyCogent: a toolkit for making sense from sequence.

Authors:  Rob Knight; Peter Maxwell; Amanda Birmingham; Jason Carnes; J Gregory Caporaso; Brett C Easton; Michael Eaton; Micah Hamady; Helen Lindsay; Zongzhi Liu; Catherine Lozupone; Daniel McDonald; Michael Robeson; Raymond Sammut; Sandra Smit; Matthew J Wakefield; Jeremy Widmann; Shandy Wikman; Stephanie Wilson; Hua Ying; Gavin A Huttley
Journal:  Genome Biol       Date:  2007       Impact factor: 13.583

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  2 in total

1.  Metagenomic Characterization Reveals Pronounced Seasonality in the Diversity and Structure of the Phyllosphere Bacterial Community in a Mediterranean Ecosystem.

Authors:  Despoina Vokou; Savvas Genitsaris; Katerina Karamanoli; Katerina Vareli; Marina Zachari; Despoina Voggoli; Nikolaos Monokrousos; John Maxwell Halley; Ioannis Sainis
Journal:  Microorganisms       Date:  2019-11-01

2.  Temporal and Spatial Changes in Phyllosphere Microbiome of Acacia Trees Growing in Arid Environments.

Authors:  Ashraf Al Ashhab; Shiri Meshner; Rivka Alexander-Shani; Hana Dimerets; Michael Brandwein; Yael Bar-Lavan; Gidon Winters
Journal:  Front Microbiol       Date:  2021-07-12       Impact factor: 5.640

  2 in total

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