| Literature DB >> 22748424 |
Mansour S Al-Said1, Mostafa M Ghorab, Yassin M Nissan.
Abstract
Several newEntities:
Year: 2012 PMID: 22748424 PMCID: PMC3543391 DOI: 10.1186/1752-153X-6-64
Source DB: PubMed Journal: Chem Cent J ISSN: 1752-153X Impact factor: 4.215
Scheme 1Synthetic pathways used to obtain compounds 2-16.
Scheme 2Synthetic pathways used to obtain compounds 17-20.
Scheme 3Synthetic pathways used to obtain compounds 21-24.
Figure 1Co-crystallized sulfone ligand on the active site of farnesyltransferase.
Binding scores and amino acid interactions of the docked compounds on the active site of farnesyltransferase (FT)
| 2 | -22.2685 | Leu B295, Lys B294 | 3.37, 2.76 | No interaction |
| 3 | -37.4155 | Lys A164, Arg B202 | 3.39, 2.53-3.14 | CN |
| 4 | -25.1368 | Lys B234, Tyr B334, LysB358, Arg B202 | 3.08, 2.75, 3.28, 2.73 | SO2 |
| 5 | -22.9916 | Lys B294, Lys A164, Gln A167, Arg B202 | 3.47, 2.84, 3.00, 3.09 | C = O |
| 6 | -31.4218 | Lys A164, Arg B202 | 2.49, 3.28 | SO2 |
| 7 | -30.3616 | Arg B291, Arg B202 | 3.19, 2.47-2.96 | CN |
| 8 | -26.5141 | Arg B291, Lys B294 | 3.55, 2.94 | CN |
| 9 | -25.5855 | Lys B294, Lys A168, His B362 | 2.58, 2.76, 3.19 | CN |
| 10 | -27.1374 | Ser B99, Ser B367, Arg B291 | 3.30, 3.05, 2.56 | No interaction |
| 11 | -23.4085 | Trp B102, Lys A168 | 2.75, 2.80 | C = O |
| 12 | -28.7413 | Lys A164, Ser B99 | 3.00, 3.25 | CN |
| 13 | -27.1676 | Lys A164, Arg B202 | 2.48, 2.76 | SO2 |
| 14 | -28.8232 | Lys A164, Arg B202 | 2.81, 2.89-3.25 | C = O |
| 15 | -32.2519 | Tyr B300, Asn A165 | 3.10, 3.32 | CN |
| 16 | -38.0536 | Arg B202, Arg B291, Lys B294 | 2.57, 3.01, 3.39 | CN |
| 17 | -19.9521 | Lys B353, Gly B290, Lys B294, Arg B202 | 2.78, 3.29, 2.67, 3.13 | No interaction |
| 18 | -23.0290 | Leu B295, Lys B294 | 3.05, 2.61 | No interaction |
| 19 | -32.9232 | Arg B291 | 3.81 | CN |
| 20 | -24.4073 | Arg B202 | 2.35 | C = O |
| 21 | -29.7807 | Tyr B300 | 2.85 | C = O |
| 22 | -38.6191 | Arg B202, Asp B352 | 2.92, 1.96 | C = O, NH |
| 23 | -38.8898 | Lys A164, Arg B202 | 2.81, 2.49-2.55 | C = O, C = O |
| 24 | -45.9317 | Lys A164, Arg B202 | 2.83, 2.46-2.45 | C = O, NH |
Figure 2Compound 24 on the active site of farnesyltransferase.
Figure 3Co-crystallized S-adenosyl methionine ligand on the active site of arginine methyltransferase (PRMT1).
Binding scores and amino acid interactions of the docked compounds on the active site of arginine methyltransferase (PRMT1)
| 2 | -20.0584 | Lys 127, His 293 | 2.65, 2.81 |
| 3 | -13.8464 | Lys 127, Arg 327 | 2.39, 2.96 |
| 4 | -17.2063 | Lys 127, Arg 327 | 2.42-2.39, 2.45 |
| 5 | -13.6909 | Lys 127, His 45, Arg 327 | 2.57, 2.95, 2.36 |
| 6 | -18.0294 | Arg 327 | 2.45-3.02 |
| 7 | 11.0959 | ------------ | ------------ |
| 8 | -15.9006 | Lys 127, Arg 327 | 2.40, 2.30 |
| 9 | -5.1052 | His 45, Glu 153, Arg 327 | 2.75, 1.65, 2.36 |
| 10 | -17.1347 | Lys 127, Glu 153, His 45 | 2.75, 1.58, 2.87 |
| 11 | -12.0837 | Asn 167 | 2.65 |
| 12 | -19.6261 | Lys 127, Arg 327 | 2.59-2.84, 2.85 |
| 13 | -15.7402 | Lys 127, Glu 153, Arg 327 | 2.47, 1.93, 2.44 |
| 14 | -20.4078 | Asn 157, Lys 127 | 3.18, 2.66-2.79 |
| 15 | -18.8629 | Gln 163, Lys 127 | 2.22, 2.42-3.23 |
| 16 | 14.8212 | ------------ | ------------ |
| 17 | -20.6494 | Asn 157, His 45, Lys 127 | 3.24, 3.21, 2.68 |
| 18 | 6.1835 | ------------ | ------------ |
| 19 | 10.1989 | ------------ | ------------ |
| 20 | -17.2838 | Lys 127 | 2.51 |
| 21 | -17.6535 | Lys 127 | 2.51, 2.86 |
| 22 | -15.4395 | Arg 327, Glu 144 | 2.79, 1.47 |
| 23 | -19.4615 | Lys 127 | 2.54, 2.52 |
| 24 | -23.0582 | Arg 327, Lys 127, Glu 130 | 2.51-2.46, 2.75, 1.36 |
Figure 4Compound 24 on the active site of arginine methyltransferase (PRMT1).
In vitro anticancer screening of the synthesized compounds against human breast cell line (MCF7)
| Doxorubicin | 0.721 ± 0.02 | 0.546 ± 0.02 | 0.461 ± 0.01 | 0.494 ± 0.03 | 71.80 |
| 2 | 0.727 ± 0.134 | 0.427 ± 0.055 | 0.307 ± 0.029 | 0.317 ± 0.021 | 46.57 |
| 3 | 0.793 ± 0.055 | 0.454 ± 0.097 | 0.292 ± 0.008 | 0.332 ± 0.050 | 52.45 |
| 4 | 0.840 ± 0.063 | 0.435 ± 0.035 | 0.403 ± 0.015 | 0.335 ± 0.082 | 54.37 |
| 5 | 0.906 ± 0.021 | 0.642 ± 0.059 | 0.428 ± 0.038 | 0.547 ± 0.046 | 81.22 |
| 6 | 0.732 ± 0.333 | 0.584 ± 0.046 | 0.406 ± 0.069 | 0.229 ± 0.097 | 49.65 |
| 7 | 0.761 ± 0.190 | 0.546 ± 0.123 | 0.254 ± 0.031 | 0.297 ± 0.048 | 47.83 |
| 8 | 0.830 ± 0.124 | 0.399 ± 0.082 | 0.199 ± 0.021 | 0.272 ± 0.005 | 42.56 |
| 9 | 0.649 ± 0.028 | 0.394 ± 0.339 | 0.207 ± 0.027 | 0.261 ± 0.049 | 37.29 |
| 10 | 0.609 ± 0.059 | 0.479 ± 0.095 | 0.332 ± 0.058 | 0.316 ± 0.064 | 45.45 |
| 11 | 0.747 ± 0.197 | 0.359 ± 0.052 | 0.153 ± 0.020 | 0.189 ± 0.002 | 35.40 |
| 12 | 0.604 ± 0.075 | 0.232 ± 0.019 | 0.376 ± 0.089 | 0.312 ± 0.029 | 40.12 |
| 13 | 0.650 ± 0.184 | 0.401 ± 0.016 | 0.253 ± 0.021 | 0.401 ± 0.017 | 45.77 |
| 14 | 0.875 ± 0.066 | 0.580 ± 0.046 | 0.336 ± 0.049 | 0.467 ± 0.047 | 65.58 |
| 15 | 0.886 ± 0.047 | 0.423 ± 0.024 | 0.259 ± 0.054 | 0.389 ± 0.047 | 52.48 |
| 16 | 0.669 ± 0.114 | 0.539 ± 0.088 | 0.276 ± 0.064 | 0.259 ± 0.080 | 44.62 |
| 17 | 0.509 ± 0.235 | 0.230 ± 0.139 | 0.300 ± 0.134 | 0.279 ± 0.065 | 29.86 |
| 18 | 0.865 ± 0.057 | 0.615 ± 0.048 | 0.232 ± 0.046 | 0.286 ± 0.071 | 50.74 |
| 19 | 0.815 ± 0.042 | 0.545 ± 0.109 | 0.264 ± 0.044 | 0.336 ± 0.096 | 51.48 |
| 20 | 0.703 ± 0.189 | 0.427 ± 0.194 | 0.251 ± 0.026 | 0.374 ± 0.085 | 46.26 |
| 21 | 0.941 ± 0.020 | 0.472 ± 0.209 | 0.199 ± 0.090 | 0.278 ± 0.108 | 47.49 |
| 22 | 0.653 ± 0.291 | 0.574 ± 0.180 | 0.337 ± 0.116 | 0.359 ± 0.044 | 52.74 |
| 23 | 0.878 ± 0.032 | 0.563 ± 0.065 | 0.276 ± 0.031 | 0.389 ± 0.058 | 56.37 |
| 24 | 0.648 ± 0.329 | 0.280 ± 0.154 | 0.174 ± 0.105 | 0.194 ± 0.065 | 30.99 |
* Each value is the mean of three values ± Standard Error.