Literature DB >> 22748321

A general theoretical framework to infer endosomal network dynamics from quantitative image analysis.

Lionel Foret1, Jonathan E Dawson, Roberto Villaseñor, Claudio Collinet, Andreas Deutsch, Lutz Brusch, Marino Zerial, Yannis Kalaidzidis, Frank Jülicher.   

Abstract

BACKGROUND: Endocytosis allows the import and distribution of cargo into a series of endosomes with distinct morphological and biochemical characteristics. Our current understanding of endocytic cargo trafficking is based on the kinetics of net cargo transport between endosomal compartments without considering individual endosomes. However, endosomes form a dynamic network of membranes undergoing fusion and fission, thereby continuously exchanging and redistributing cargo. The macroscopic kinetic properties, i.e., the properties of the endosomal network as a whole, result from the collective behaviors of many individual endosomes, a problem so far largely unaddressed.
RESULTS: Here, we developed a general theoretical framework to describe the dynamics of cargo distributions in the endosomal network. We combined the theory with quantitative experiments to study how the macroscopic kinetic properties of the endosomal network emerge from microscopic processes at the level of individual endosomes. We compared our theory predictions to experimental data in which dynamic distributions of endocytosed low-density lipoprotein (LDL) were quantified.
CONCLUSIONS: Our theory can quantitatively describe the observed cargo distributions as a function of time. Remarkably, the theory allows determining microscopic kinetic parameters such as the fusion rate between endosomes from still images of cargo distributions at different times of internalization. We show that this method is robust and sensitive because cargo distributions result from an average over many stochastic events in many cells. Our results provide theoretical and experimental support to the "funnel model" of endosome progression and suggest that the conversion of early to late endosomes is the major mode of LDL trafficking.
Copyright © 2012 Elsevier Ltd. All rights reserved.

Mesh:

Year:  2012        PMID: 22748321     DOI: 10.1016/j.cub.2012.06.021

Source DB:  PubMed          Journal:  Curr Biol        ISSN: 0960-9822            Impact factor:   10.834


  24 in total

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Authors:  Marcos Gonzalez-Gaitan; Frank Jülicher
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2.  Stochastic Model of Maturation and Vesicular Exchange in Cellular Organelles.

Authors:  Quentin Vagne; Pierre Sens
Journal:  Biophys J       Date:  2018-02-27       Impact factor: 4.033

3.  The Monomeric GTPase Rab35 Regulates Phagocytic Cup Formation and Phagosomal Maturation in Entamoeba histolytica.

Authors:  Kuldeep Verma; Sunando Datta
Journal:  J Biol Chem       Date:  2017-01-26       Impact factor: 5.157

4.  Delivery Order of Nanoconstructs Affects Intracellular Trafficking by Endosomes.

Authors:  Kwahun Lee; Insub Jung; Teri W Odom
Journal:  J Am Chem Soc       Date:  2022-03-18       Impact factor: 16.383

5.  Complex Rab4-Mediated Regulation of Endosomal Size and EGFR Activation.

Authors:  Kate Tubbesing; Jamie Ward; Raymond Abini-Agbomson; Aditi Malhotra; Alena Rudkouskaya; Janine Warren; John Lamar; Nina Martino; Alejandro P Adam; Margarida Barroso
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Review 6.  Interplay between morphogen-directed positional information systems and physiological signaling.

Authors:  Francisco Huizar; Dharsan Soundarrajan; Ramezan Paravitorghabeh; Jeremiah Zartman
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Review 7.  Rab GTPase regulation of membrane identity.

Authors:  Suzanne R Pfeffer
Journal:  Curr Opin Cell Biol       Date:  2013-04-29       Impact factor: 8.382

8.  Internalized compartments encapsulated nanogels for targeted drug delivery.

Authors:  Jicheng Yu; Yuqi Zhang; Wujin Sun; Chao Wang; Davis Ranson; Yanqi Ye; Yuyan Weng; Zhen Gu
Journal:  Nanoscale       Date:  2016-04-28       Impact factor: 7.790

9.  Regulation of EGFR signal transduction by analogue-to-digital conversion in endosomes.

Authors:  Roberto Villaseñor; Hidenori Nonaka; Perla Del Conte-Zerial; Yannis Kalaidzidis; Marino Zerial
Journal:  Elife       Date:  2015-02-04       Impact factor: 8.140

10.  Visualization of actin filaments and monomers in somatic cell nuclei.

Authors:  Brittany J Belin; Beth A Cimini; Elizabeth H Blackburn; R Dyche Mullins
Journal:  Mol Biol Cell       Date:  2013-02-27       Impact factor: 4.138

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