Literature DB >> 22740710

Use of matrix-assisted laser desorption ionization-time of flight mass spectrometry to identify vancomycin-resistant enterococci and investigate the epidemiology of an outbreak.

Paul M Griffin1, Gareth R Price, Jacqueline M Schooneveldt, Sanmarié Schlebusch, Martyn H Tilse, Tess Urbanski, Brett Hamilton, Deon Venter.   

Abstract

The control of vancomycin-resistant enterococci (VRE) has become an increasing burden on health care resources since their discovery over 20 years ago. Current techniques employed for their detection include time-consuming and laborious phenotypic methods or molecular methods requiring costly equipment and consumables and highly trained staff. An accurate, rapid diagnostic test has the ability to greatly reduce the spread of this organism, which has the ability to colonize patients for long periods, potentially even lifelong. Matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF MS) is a technology with the ability to identify organisms in seconds and has shown promise in the identification of other forms of antimicrobial resistance in other organisms. Here we show that MALDI-TOF MS is capable of rapidly and accurately identifying vanB-positive Enterococcus faecium VRE from susceptible isolates. Internal validation of the optimal model generated produced a sensitivity of 92.4% and a specificity of 85.2%. Prospective validation results, following incorporation into the routine laboratory work flow, demonstrated a greater sensitivity and specificity at 96.7% and 98.1%, respectively. In addition, the utilization of MALDI-TOF MS to determine the relatedness of isolates contributing to an outbreak is also demonstrated.

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Year:  2012        PMID: 22740710      PMCID: PMC3421795          DOI: 10.1128/JCM.01000-12

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  18 in total

1.  Sample preparation of Gram-positive bacteria for identification by matrix assisted laser desorption/ionization time-of-flight.

Authors:  Sandra C Smole; Lisa A King; Peter E Leopold; Robert D Arbeit
Journal:  J Microbiol Methods       Date:  2002-02       Impact factor: 2.363

2.  The discriminatory power of MALDI-TOF mass spectrometry to differentiate between isogenic teicoplanin-susceptible and teicoplanin-resistant strains of methicillin-resistant Staphylococcus aureus.

Authors:  Paul A Majcherczyk; Therese McKenna; Philippe Moreillon; Pierre Vaudaux
Journal:  FEMS Microbiol Lett       Date:  2006-02       Impact factor: 2.742

3.  Fishing for biomarkers: analyzing mass spectrometry data with the new ClinProTools software.

Authors:  Ralf Ketterlinus; Sen-Yung Hsieh; Shih-Hua Teng; Helen Lee; Wolfgang Pusch
Journal:  Biotechniques       Date:  2005-06       Impact factor: 1.993

4.  Comparison of direct colony method versus extraction method for identification of gram-positive cocci by use of Bruker Biotyper matrix-assisted laser desorption ionization-time of flight mass spectrometry.

Authors:  Adnan A Alatoom; Scott A Cunningham; Sherry M Ihde; Jayawant Mandrekar; Robin Patel
Journal:  J Clin Microbiol       Date:  2011-05-25       Impact factor: 5.948

5.  Discrimination and characterization of environmental strains of Escherichia coli by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF-MS).

Authors:  Thomas J Siegrist; Phillip D Anderson; Wing H Huen; Gregory T Kleinheinz; Colleen M McDermott; Todd R Sandrin
Journal:  J Microbiol Methods       Date:  2006-12-19       Impact factor: 2.363

6.  Practical approach to the identification of clinically relevant Enterococcus species.

Authors:  B M Willey; R N Jones; A McGeer; W Witte; G French; R B Roberts; S G Jenkins; H Nadler; D E Low
Journal:  Diagn Microbiol Infect Dis       Date:  1999-07       Impact factor: 2.803

7.  Emergence and epidemiology of vancomycin-resistant enterococci in Australia.

Authors:  J Bell; J Turnidge; G Coombs; F O'Brien
Journal:  Commun Dis Intell       Date:  1998-10-29

8.  Glycopeptide resistance mediated by enterococcal transposon Tn1546 requires production of VanX for hydrolysis of D-alanyl-D-alanine.

Authors:  P E Reynolds; F Depardieu; S Dutka-Malen; M Arthur; P Courvalin
Journal:  Mol Microbiol       Date:  1994-09       Impact factor: 3.501

9.  Regulation of VanB-type vancomycin resistance gene expression by the VanS(B)-VanR (B) two-component regulatory system in Enterococcus faecalis V583.

Authors:  S Evers; P Courvalin
Journal:  J Bacteriol       Date:  1996-03       Impact factor: 3.490

10.  Emergence of vancomycin-resistant enterococci in Australia: phenotypic and genotypic characteristics of isolates.

Authors:  J M Bell; J C Paton; J Turnidge
Journal:  J Clin Microbiol       Date:  1998-08       Impact factor: 5.948

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  48 in total

1.  Peaks of Promise and Peril: Screening for Antibiotic Resistance by Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry.

Authors:  Neil W Anderson
Journal:  J Clin Microbiol       Date:  2015-11-11       Impact factor: 5.948

Review 2.  Matrix-assisted laser desorption ionization-time of flight mass spectrometry: a fundamental shift in the routine practice of clinical microbiology.

Authors:  Andrew E Clark; Erin J Kaleta; Amit Arora; Donna M Wolk
Journal:  Clin Microbiol Rev       Date:  2013-07       Impact factor: 26.132

3.  MALDI-TOF MS meets WGS in a VRE outbreak investigation.

Authors:  S Schlebusch; G R Price; R L Gallagher; V Horton-Szar; L D H Elbourne; P Griffin; D J Venter; S O Jensen; S J Van Hal
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2016-11-26       Impact factor: 3.267

Review 4.  MALDI-TOF mass spectrometry technology for detecting biomarkers of antimicrobial resistance: current achievements and future perspectives.

Authors:  Georgia Vrioni; Constantinos Tsiamis; George Oikonomidis; Kalliopi Theodoridou; Violeta Kapsimali; Athanasios Tsakris
Journal:  Ann Transl Med       Date:  2018-06

Review 5.  Matrix-assisted laser desorption ionization-time of flight (maldi-tof) mass spectrometry for detection of antibiotic resistance mechanisms: from research to routine diagnosis.

Authors:  Jaroslav Hrabák; Eva Chudácková; Radka Walková
Journal:  Clin Microbiol Rev       Date:  2013-01       Impact factor: 26.132

6.  Detection of extended-spectrum-β-lactamase-producing Escherichia coli ST131 and ST405 clonal groups by matrix-assisted laser desorption ionization-time of flight mass spectrometry.

Authors:  Yasufumi Matsumura; Masaki Yamamoto; Miki Nagao; Michio Tanaka; Kiyomasa Machida; Yutaka Ito; Shunji Takakura; Satoshi Ichiyama
Journal:  J Clin Microbiol       Date:  2014-01-15       Impact factor: 5.948

Review 7.  The Enterococcus: a Model of Adaptability to Its Environment.

Authors:  Mónica García-Solache; Louis B Rice
Journal:  Clin Microbiol Rev       Date:  2019-01-30       Impact factor: 26.132

8.  Development and evaluation of MALDI-TOF MS-based serotyping for Streptococcus pneumoniae.

Authors:  S Nakano; Y Matsumura; Y Ito; T Fujisawa; B Chang; S Suga; K Kato; T Yunoki; G Hotta; T Noguchi; M Yamamoto; M Nagao; S Takakura; M Ohnishi; T Ihara; S Ichiyama
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2015-08-19       Impact factor: 3.267

Review 9.  Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry for Use with Positive Blood Cultures: Methodology, Performance, and Optimization.

Authors:  Matthew L Faron; Blake W Buchan; Nathan A Ledeboer
Journal:  J Clin Microbiol       Date:  2017-08-30       Impact factor: 5.948

Review 10.  Whole-Genome Sequencing of Bacterial Pathogens: the Future of Nosocomial Outbreak Analysis.

Authors:  Scott Quainoo; Jordy P M Coolen; Sacha A F T van Hijum; Martijn A Huynen; Willem J G Melchers; Willem van Schaik; Heiman F L Wertheim
Journal:  Clin Microbiol Rev       Date:  2017-10       Impact factor: 26.132

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