Literature DB >> 22740673

Genome sequence of enterohemorrhagic Escherichia coli NCCP15658.

Ju Yeon Song1, Ran Hee Yoo, Song Yee Jang, Won-Keun Seong, Seon-Young Kim, Haeyoung Jeong, Sung Gyun Kang, Byung Kwon Kim, Soon-Kyeong Kwon, Choong Hoon Lee, Dong Su Yu, Mi-Sun Park, Seung-Hak Cho, Jihyun F Kim.   

Abstract

Enterohemorrhagic Escherichia coli causes severe food-borne disease in the guts of humans and animals. Here, we report the high-quality draft genome sequence of E. coli NCCP15658 isolated from a patient in the Republic of Korea. Its genome size was determined to be 5.46 Mb, and its genomic features, including genes encoding virulence factors, were analyzed.

Entities:  

Mesh:

Year:  2012        PMID: 22740673      PMCID: PMC3393508          DOI: 10.1128/JB.00653-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  15 in total

1.  Fast DNA serotyping of Escherichia coli by use of an oligonucleotide microarray.

Authors:  Karin Ballmer; Bozena M Korczak; Peter Kuhnert; Peter Slickers; Ralf Ehricht; Herbert Hächler
Journal:  J Clin Microbiol       Date:  2006-11-15       Impact factor: 5.948

2.  Prevalence of Shiga toxin-producing Escherichia coli stx1, stx2, eaeA, and rfbE genes and survival of E. coli O157:H7 in manure from organic and low-input conventional dairy farms.

Authors:  Eelco Franz; Michel M Klerks; Oscar J De Vos; Aad J Termorshuizen; Ariena H C van Bruggen
Journal:  Appl Environ Microbiol       Date:  2007-02-02       Impact factor: 4.792

3.  Recent progress of microbial genome projects in Korea.

Authors:  Haeyoung Jeong; Sung Ho Yoon; Dong-Su Yu; Tae-Kwang Oh; Jihyun F Kim
Journal:  Biotechnol J       Date:  2008-05       Impact factor: 4.677

4.  Analysis of the genome of the Escherichia coli O157:H7 2006 spinach-associated outbreak isolate indicates candidate genes that may enhance virulence.

Authors:  Bridget R Kulasekara; Michael Jacobs; Yang Zhou; Zaining Wu; Elizabeth Sims; Channakhone Saenphimmachak; Laurence Rohmer; Jennifer M Ritchie; Matthew Radey; Matthew McKevitt; Theodore Larson Freeman; Hillary Hayden; Eric Haugen; Will Gillett; Christine Fong; Jean Chang; Viktoriya Beskhlebnaya; Matthew K Waldor; Mansour Samadpour; Thomas S Whittam; Rajinder Kaul; Mitchell Brittnacher; Samuel I Miller
Journal:  Infect Immun       Date:  2009-06-29       Impact factor: 3.441

5.  Genome sequence of enterohaemorrhagic Escherichia coli O157:H7.

Authors:  N T Perna; G Plunkett; V Burland; B Mau; J D Glasner; D J Rose; G F Mayhew; P S Evans; J Gregor; H A Kirkpatrick; G Pósfai; J Hackett; S Klink; A Boutin; Y Shao; L Miller; E J Grotbeck; N W Davis; A Lim; E T Dimalanta; K D Potamousis; J Apodaca; T S Anantharaman; J Lin; G Yen; D C Schwartz; R A Welch; F R Blattner
Journal:  Nature       Date:  2001-01-25       Impact factor: 49.962

6.  Genomic anatomy of Escherichia coli O157:H7 outbreaks.

Authors:  Mark Eppinger; Mark K Mammel; Joseph E Leclerc; Jacques Ravel; Thomas A Cebula
Journal:  Proc Natl Acad Sci U S A       Date:  2011-11-30       Impact factor: 11.205

7.  Distribution of espI among clinical enterohaemorrhagic and enteropathogenic Escherichia coli isolates.

Authors:  Rosanna Mundy; Claire Jenkins; Jun Yu; Henry Smith; Gad Frankel
Journal:  J Med Microbiol       Date:  2004-11       Impact factor: 2.472

8.  The elements of the locus of enterocyte effacement in human and wild mammal isolates of Escherichia coli: evolution by assemblage or disruption?

Authors:  L Sandner; L E Eguiarte; A Navarro; A Cravioto; V Souza
Journal:  Microbiology       Date:  2001-11       Impact factor: 2.777

9.  Dissecting virulence: systematic and functional analyses of a pathogenicity island.

Authors:  Wanyin Deng; José L Puente; Samantha Gruenheid; Yuling Li; Bruce A Vallance; Alejandra Vázquez; Jeannette Barba; J Antonio Ibarra; Paul O'Donnell; Pavel Metalnikov; Keith Ashman; Sansan Lee; David Goode; Tony Pawson; B Brett Finlay
Journal:  Proc Natl Acad Sci U S A       Date:  2004-02-26       Impact factor: 11.205

10.  The RAST Server: rapid annotations using subsystems technology.

Authors:  Ramy K Aziz; Daniela Bartels; Aaron A Best; Matthew DeJongh; Terrence Disz; Robert A Edwards; Kevin Formsma; Svetlana Gerdes; Elizabeth M Glass; Michael Kubal; Folker Meyer; Gary J Olsen; Robert Olson; Andrei L Osterman; Ross A Overbeek; Leslie K McNeil; Daniel Paarmann; Tobias Paczian; Bruce Parrello; Gordon D Pusch; Claudia Reich; Rick Stevens; Olga Vassieva; Veronika Vonstein; Andreas Wilke; Olga Zagnitko
Journal:  BMC Genomics       Date:  2008-02-08       Impact factor: 3.969

View more
  5 in total

1.  Genome sequences of the Shiga-like toxin-producing Escherichia coli NCCP15655 and NCCP15656.

Authors:  Min-Jung Kwak; Soon-Kyeong Kwon; Seung-Hak Cho; Jihyun F Kim
Journal:  Gut Pathog       Date:  2015-05-12       Impact factor: 4.181

2.  Genome sequence of Escherichia coli NCCP15653, a group D strain isolated from a diarrhea patient.

Authors:  Min-Jung Kwak; Myung-Soo Kim; Soon-Kyeong Kwon; Seung-Hak Cho; Jihyun F Kim
Journal:  Gut Pathog       Date:  2016-02-23       Impact factor: 4.181

3.  Comparative genomic analysis of enterotoxigenic Escherichia coli O159 strains isolated from diarrheal patients in Korea.

Authors:  Si-Yun Chung; Taesoo Kwon; Seung-Hak Cho; Won Kim; Young-Seok Bak; Joung Je Park; Cheorl-Ho Kim
Journal:  Gut Pathog       Date:  2019-02-21       Impact factor: 4.181

4.  Isolation and characterization of a novel Escherichia coli O157:H7-specific phage as a biocontrol agent.

Authors:  Cheonghoon Lee; In Young Choi; Do Hyeon Park; Mi-Kyung Park
Journal:  J Environ Health Sci Eng       Date:  2020-02-06

5.  Construction of a Lectin-Glycan Interaction Network from Enterohemorrhagic Escherichia coli Strains by Multi-omics Analysis.

Authors:  Seung-Hak Cho; Kang Mo Lee; Cheorl-Ho Kim; Sung Soon Kim
Journal:  Int J Mol Sci       Date:  2020-04-12       Impact factor: 5.923

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.