Literature DB >> 22740670

Complete genome sequence of Helicobacter cinaedi strain PAGU611, isolated in a case of human bacteremia.

Takatsugu Goto1, Yoshitoshi Ogura, Hideki Hirakawa, Junko Tomida, Yuji Morita, Takaaki Akaike, Tetsuya Hayashi, Yoshiaki Kawamura.   

Abstract

We report the complete genome sequence of Helicobacter cinaedi strain PAGU611, isolated in a case of human bacteremia. The PAGU611 genome comprises a 2,078,348-bp chromosome and a 23,054-bp plasmid. The chromosome contains a unique genomic island, encoding a type VI secretion system and clustered regularly interspaced short palindromic repeat (CRISPR) loci.

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Year:  2012        PMID： 22740670      PMCID： PMC3393485          DOI： 10.1128/JB.00645-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  18 in total

1.  Basic local alignment search tool.

Authors:  S F Altschul; W Gish; W Miller; E W Myers; D J Lipman
Journal:  J Mol Biol       Date:  1990-10-05       Impact factor: 5.469

2.  The complete genome sequence of the gastric pathogen Helicobacter pylori.

Authors:  J F Tomb; O White; A R Kerlavage; R A Clayton; G G Sutton; R D Fleischmann; K A Ketchum; H P Klenk; S Gill; B A Dougherty; K Nelson; J Quackenbush; L Zhou; E F Kirkness; S Peterson; B Loftus; D Richardson; R Dodson; H G Khalak; A Glodek; K McKenney; L M Fitzegerald; N Lee; M D Adams; E K Hickey; D E Berg; J D Gocayne; T R Utterback; J D Peterson; J M Kelley; M D Cotton; J M Weidman; C Fujii; C Bowman; L Watthey; E Wallin; W S Hayes; M Borodovsky; P D Karp; H O Smith; C M Fraser; J C Venter
Journal:  Nature       Date:  1997-08-07       Impact factor: 49.962

3.  Alkyl hydroperoxide reductase is required for Helicobacter cinaedi intestinal colonization and survival under oxidative stress in BALB/c and BALB/c interleukin-10-/- mice.

Authors:  Nisanart Charoenlap; Zeli Shen; Megan E McBee; Suresh Muthupalani; Gerald N Wogan; James G Fox; David B Schauer
Journal:  Infect Immun       Date:  2011-12-19       Impact factor: 3.441

Review 4.  The expanding genus of Helicobacter: pathogenic and zoonotic potential.

Authors:  J G Fox
Journal:  Semin Gastrointest Dis       Date:  1997-07

5.  Secretion of the virulence-associated Campylobacter invasion antigens from Campylobacter jejuni requires a stimulatory signal.

Authors:  V Rivera-Amill; B J Kim; J Seshu; M E Konkel
Journal:  J Infect Dis       Date:  2001-05-01       Impact factor: 5.226

6.  Helicobacter cinaedi cellulitis and bacteremia in immunocompetent hosts after orthopedic surgery.

Authors:  Toshio Kitamura; Yoshiaki Kawamura; Kiyofumi Ohkusu; Takayuki Masaki; Hirofumi Iwashita; Tomohiro Sawa; Shigemoto Fujii; Tatsuya Okamoto; Takaaki Akaike
Journal:  J Clin Microbiol       Date:  2006-11-01       Impact factor: 5.948

7.  Multicenter study to evaluate bloodstream infection by Helicobacter cinaedi in Japan.

Authors:  Tetsuya Matsumoto; Mieko Goto; Hinako Murakami; Takashi Tanaka; Hiroyuki Nishiyama; Emi Ono; Chikako Okada; Etsuko Sawabe; Michiko Yagoshi; Akiko Yoneyama; Katsuko Okuzumi; Kazuhiro Tateda; Naoaki Misawa; Keizo Yamaguchi
Journal:  J Clin Microbiol       Date:  2007-06-27       Impact factor: 5.948

8.  Identification of the major antigenic protein of Helicobacter cinaedi and its immunogenicity in humans with H. cinaedi infections.

Authors:  Hirofumi Iwashita; Shigemoto Fujii; Yoshiaki Kawamura; Tatsuya Okamoto; Tomohiro Sawa; Takayuki Masaki; Akira Nishizono; Shuichi Higashi; Toshio Kitamura; Fumio Tamura; Yutaka Sasaki; Takaaki Akaike
Journal:  Clin Vaccine Immunol       Date:  2008-01-02

Review 9.  Recurrent bacteremia with Helicobacter cinaedi: case report and review of the literature.

Authors:  Ilker Uçkay; Jorge Garbino; Pierre-Yves Dietrich; Béatrice Ninet; Peter Rohner; Véronique Jacomo
Journal:  BMC Infect Dis       Date:  2006-05-23       Impact factor: 3.090

10.  CRISPRFinder: a web tool to identify clustered regularly interspaced short palindromic repeats.

Authors:  Ibtissem Grissa; Gilles Vergnaud; Christine Pourcel
Journal:  Nucleic Acids Res       Date:  2007-05-30       Impact factor: 16.971
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  13 in total

1.  Identification of and screening for human Helicobacter cinaedi infections and carriers via nested PCR.

Authors:  Kohta Oyama; Shahzada Khan; Tatsuya Okamoto; Shigemoto Fujii; Katsuhiko Ono; Tetsuro Matsunaga; Jun Yoshitake; Tomohiro Sawa; Junko Tomida; Yoshiaki Kawamura; Takaaki Akaike
Journal:  J Clin Microbiol       Date:  2012-09-26       Impact factor: 5.948

2.  Complete genome sequence of Helicobacter cinaedi type strain ATCC BAA-847.

Authors:  Tohru Miyoshi-Akiyama; Nozomi Takeshita; Norio Ohmagari; Teruo Kirikae
Journal:  J Bacteriol       Date:  2012-10       Impact factor: 3.490

3.  The pathogenic potential of Helicobacter cinaedi isolated from non-human sources: adherence, invasion and translocation ability in polarized intestinal epithelial Caco-2 cells in vitro.

Authors:  Takako Taniguchi; Wataru Yamazaki; Yuji Saeki; Ichiro Takajo; Akihiko Okayama; Tetsuya Hayashi; Naoaki Misawa
Journal:  J Vet Med Sci       Date:  2015-12-20       Impact factor: 1.267

4.  Draft Genome Sequence of Clinical Strain TANI1 of Streptococcus suis Serotype 5 Isolated from a Bacteremia Patient in Japan.

Authors:  Haruno Yoshida; Takayuki Wada; Daisuke Taniyama; Takashi Takahashi
Journal:  Genome Announc       Date:  2017-05-04

5.  The Helicobacter cinaedi antigen CAIP participates in atherosclerotic inflammation by promoting the differentiation of macrophages in foam cells.

Authors:  Mario Milco D'Elios; Francesca Vallese; Nagaja Capitani; Marisa Benagiano; Maria Lina Bernardini; Mirko Rossi; Gian Paolo Rossi; Mauro Ferrari; Cosima Tatiana Baldari; Giuseppe Zanotti; Marina de Bernard; Gaia Codolo
Journal:  Sci Rep       Date:  2017-01-11       Impact factor: 4.379

6.  Promotion of atherosclerosis by Helicobacter cinaedi infection that involves macrophage-driven proinflammatory responses.

Authors:  Shahzada Khan; H N Ashiqur Rahman; Tatsuya Okamoto; Tetsuro Matsunaga; Yukio Fujiwara; Tomohiro Sawa; Jun Yoshitake; Katsuhiko Ono; Khandaker Ahtesham Ahmed; Md Mizanur Rahaman; Kohta Oyama; Motohiro Takeya; Tomoaki Ida; Yoshiaki Kawamura; Shigemoto Fujii; Takaaki Akaike
Journal:  Sci Rep       Date:  2014-04-15       Impact factor: 4.379

7.  HelicoBase: a Helicobacter genomic resource and analysis platform.

Authors:  Siew Woh Choo; Mia Yang Ang; Hanieh Fouladi; Shi Yang Tan; Cheuk Chuen Siow; Naresh V R Mutha; Hamed Heydari; Wei Yee Wee; Jamuna Vadivelu; Mun Fai Loke; Vellaya Rehvathy; Guat Jah Wong
Journal:  BMC Genomics       Date:  2014-07-16       Impact factor: 3.969

8.  Draft genome sequences of six enterohepatic helicobacter species isolated from humans and one from rhesus macaques.

Authors:  Zeli Shen; Alexander Sheh; Sarah K Young; Amr Abouelliel; Doyle V Ward; Ashlee M Earl; James G Fox
Journal:  Genome Announc       Date:  2014-09-11

Review 9.  Multidrug Efflux Systems in Helicobacter cinaedi.

Authors:  Yuji Morita; Junko Tomida; Yoshiaki Kawamura
Journal:  Antibiotics (Basel)       Date:  2012-11-21

10.  Draft Genome Sequence of Streptococcus canis Clinical Strain TA4, Harboring the M-Like Protein Gene and Isolated in Japan from a Patient with Bacteremia.

Authors:  Haruno Yoshida; Yukie Katayama; Yasuto Fukushima; Daisuke Taniyama; Yoshiteru Murata; Tetsuya Mizutani; Takashi Takahashi
Journal:  Genome Announc       Date:  2018-01-18
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