| Literature DB >> 22737217 |
Andreas Kurth1, Claudia Kohl, Annika Brinkmann, Arnt Ebinger, Jennifer A Harper, Lin-Fa Wang, Kristin Mühldorfer, Gudrun Wibbelt.
Abstract
The zoonotic potential of paramyxoviruses is particularly demonstrated by their broad host range like the highly pathogenic Hendra and Nipah viruses originating from bats. But while so far all bat-borne paramyxoviruses have been identified in fruit bats across Africa, Australia, South America, and Asia, we describe the detection and characterization of the first paramyxoviruses in free-ranging European bats. Moreover, we examined the possible impact of paramyxovirus infection on individual animals by comparing histo-pathological findings and virological results. Organs from deceased insectivorous bats of various species were sampled in Germany and tested for paramyxovirus RNA in parallel to a histo-pathological examination. Nucleic acids of three novel paramyxoviruses were detected, two viruses in phylogenetic relationship to the recently proposed genus Jeilongvirus and one closely related to the genus Rubulavirus. Two infected animals revealed subclinical pathological changes within their kidneys, suggestive of a similar pathogenesis as the one described in fruit bats experimentally infected with Hendra virus.Our findings indicate the presence of bat-born paramyxoviruses in geographic areas free of fruit bat species and therefore emphasize a possible virus-host co-evolution in European bats. Since these novel viruses are related to the very distinct genera Rubulavirus and Jeilongvirus, a similarly broad genetic diversity among paramyxoviruses in other Microchiroptera compared to Megachiroptera can be assumed. Given that the infected bats were either found in close proximity to heavily populated human habitation or areas of intensive agricultural use, a potential risk of the emergence of zoonotic paramyxoviruses in Europe needs to be considered.Entities:
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Year: 2012 PMID: 22737217 PMCID: PMC3380927 DOI: 10.1371/journal.pone.0038688
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Primer sequences.
| Virus | Primer | Sequence 5′ to 3′ | Tm (°C) |
| BatPV/Myo.mys/E20/09 | E20/09 F | TgACAgATgATTTATgTgTTCgTTACT | 55.6 |
| E20/09 R | gAATCCCACTCTgATTTCAACg | 56.1 | |
| E20/09 MGB | AAgTgTTTCATgCCATTgA | 68 | |
| BatPV/Pip.pip/E95/09 | E95/09 F | ggTgCTTggCCACCTCT | 57.3 |
| E95/09 R | gCgATgAAgTTTgTCTTggA | 56.4 | |
| E95/09 MGB | CACTgCTTTATgCCTTTAA | 70 | |
| BatPV/Nyc.noc/E155/09 | E155/09 F2 | ggAgATTgCACTCAgTCTTCCTgT | 57.4 |
| E155/09 R2 | gTCCCCCTACTTgAgATggCA | 56.3 | |
| E155/09 MGB | TCCgAgCTAAAATgTCA | 68 |
Figure 1Improved detection sensitivity after Taguchi optimization of the Paramyxovirinae subfamily-specific PCR [.
Gel electrophoresis of amplification products of the second round seminested PCR using 10-fold serial dilutions (100 to 10−4) of a cDNA-sample (kidney of sample E20/09). (A) PCR protocol adopted for two-step PCR as previously published [21] using the pan-PAR-F1/PAR-R primer pair (1st run) and the pan-PAR-F2/PAR-R primer pair (2nd run). (B) Optimized protocol using the pan-PAR-F1/PAR-R primer pair (1st run) and the pan-PAR-F2/PAR-R primer pair (2nd run).
Animal properties of paramyxovirus-infected adult insectivorous bats.
| Virus | Species | Sex | Source | Positive PCR/sequencing (PAR primers) | Positive PCR/sequencing (RES-MOR-HEN primers) | ||
| Organ pool | Organ | Organ pool | Organ | ||||
| BatPV/Myo.mys/E20/09 |
| Male | Bavaria | + | Kidney | + | + |
| BatPV/Pip.pip/E95/09 |
| Female | Bavaria | + | n.d. | + | n.d. |
| BatPV/Nyc.noc/E155/09 |
| Female | Berlin | + | Lung | – | − |
not determined due to sample volume limitations.
Figure 2Phylogenetic analysis of the partial L-gene sequence obtained from PCR fragments after Pan-Paramyxovirinae-PCR with PAR primers (529 bp) [21].
The revealed gap-free alignment was used to generate a phylogenetic tree of the novel bat paramyxoviruses (red) concordant with representatives from all known genera of paramyxoviruses with MrBayes. Posterior probability rates are given next to the tree nodes. GenBank Accession numbers of novel paramyxoviruses PAR fragment: JN086950 (BatPV/Myo.mys/E20/09), JN086951 (BatPV/Pip.pip/E95/09), JN086952 (BatPV/Nyc.noc/E155/09). RSV = respiratory syncytial virus.
Figure 3Phylogenetic analysis of the partial L-gene sequence obtained from a longer PCR fragment after Pan-Paramyxovirinae-PCR with novel primers (1,593 bp).
The revealed gap-free alignment was used to generate a phylogenetic tree of the novel bat paramyxovirus (red) concordant with closely related representatives from other paramyxoviruses with MrBayes. Posterior probability rates are given next to the tree nodes. GenBank Accession number of the long fragment of BatPV/Pip.pip/E95/09: JN086951.
Relatedness of the novel paramyxoviruses to other members of currently established genera of the family Paramyxoviridae.
| Genus / Species | (1) | (2) | (3) | (4) | (5) | (6) | (7) | (8) | (9) | (10) | (11) |
| (1) Pneumovirus | n.d. | ||||||||||
| (2) Metapneumovirus | 63.8 | n.d. | |||||||||
| (3) Avulavirus | 31.3 | 32.7 | n.d. | ||||||||
| (4) Rubulavirus | 33.8 | 34.2 | 48.8 | ≥64.1 | |||||||
| (5) Respirovirus | 33.4 | 32.9 | 44.2 | 46.0 | ≥73.0 | ||||||
| (6) Morbillivirus | 34.4 | 33.5 | 42.7 | 45.9 | 52.5 | ≥74.2 | |||||
| (7) Henipavirus | 34.2 | 33.2 | 37.1 | 39.5 | 44.0 | 45.7 | ≥76.8 | ||||
| (8) J-virus | 34.7 | 35.3 | 42.5 | 48.0 | 54.0 | 58.8 | 48.6 | n.d. | |||
| (9) BatPV/Myo.mys/E20/09* | 37.5 | 37.5 | 38.8 | 46.8 | 54.0 | 58.9 | 63.2 |
| n.d. | ||
| (10) BatPV/Pip.pip/E95/09 | 36.7 | 36.9 | 45.2 | 50.0 | 53.0 | 58.0 | 51.1 |
|
| n.d. | |
| (11) BatPV/Nyc.noc/E155/09* | 36.8 | 36.1 | 46.2 |
| 47.4 | 49.1 | 47.2 | 48.5 | 47.5 | 47.9 | n.d. |
Table lists percentage of nucleotide homology within the partial L-gene (529 base pairs) obtained by pan-Paramyxovirinae-specific PCR (PAR primers). Bold numbers present the highest identities of the novel bat paramyxoviruses with the following established species: Human respiratory syncytial virus M74568 (Pneumovirus), Human metapneumovirus AY297749 (Metapneumovirus), Newcastle disease virus AY505072 (Avulavirus), Mumps virus HQ416907 (Rubulavirus), Sendai virus EF679198 (Respirovirus), Measles virus AF266290 (Morbillivirus), Hendra virus HM044317 (Henipavirus), J-virus (AY900001), BatPV/Myo.mys/E20/09 (JN086950), BatPV/Pip.pip/E95/09 (JN086951), BatPV/Nyc.noc/E155/09 (JN086952). n.d.: not determined.
Figure 4Kidney of a common pipistrelle bat (E95/09) with interstitial nephritis comprised by segmental infiltrates of lymphocytes, plasma cells, and occasional single neutrophilic granulocytes.