Literature DB >> 22734491

Mapping of visual receptive fields by tomographic reconstruction.

Gordon Pipa1, Zhe Chen, Sergio Neuenschwander, Bruss Lima, Emery N Brown.   

Abstract

The moving bar experiment is a classic paradigm for characterizing the receptive field (RF) properties of neurons in primary visual cortex (V1). Current approaches for analyzing neural spiking activity recorded from these experiments do not take into account the point-process nature of these data and the circular geometry of the stimulus presentation. We present a novel analysis approach to mapping V1 receptive fields that combines point-process generalized linear models (PPGLM) with tomographic reconstruction computed by filtered-back projection. We use the method to map the RF sizes and orientations of 251 V1 neurons recorded from two macaque monkeys during a moving bar experiment. Our cross-validated goodness-of-fit analyses show that the PPGLM provides a more accurate characterization of spike train data than analyses based on rate functions computed by the methods of spike-triggered averages or first-order Wiener-Volterra kernel. Our analysis leads to a new definition of RF size as the spatial area over which the spiking activity is significantly greater than baseline activity. Our approach yields larger RF sizes and sharper orientation tuning estimates. The tomographic reconstruction paradigm further suggests an efficient approach to choosing the number of directions and the number of trials per direction in designing moving bar experiments. Our results demonstrate that standard tomographic principles for image reconstruction can be adapted to characterize V1 RFs and that two fundamental properties, size and orientation, may be substantially different from what is currently reported.

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Mesh:

Year:  2012        PMID: 22734491      PMCID: PMC3972919          DOI: 10.1162/NECO_a_00334

Source DB:  PubMed          Journal:  Neural Comput        ISSN: 0899-7667            Impact factor:   2.026


  37 in total

1.  The time-rescaling theorem and its application to neural spike train data analysis.

Authors:  Emery N Brown; Riccardo Barbieri; Valérie Ventura; Robert E Kass; Loren M Frank
Journal:  Neural Comput       Date:  2002-02       Impact factor: 2.026

2.  Learning to see: experience and attention in primary visual cortex.

Authors:  R E Crist; W Li; C D Gilbert
Journal:  Nat Neurosci       Date:  2001-05       Impact factor: 24.884

3.  Adaptive spatiotemporal receptive field estimation in the visual pathway.

Authors:  Garrett B Stanley
Journal:  Neural Comput       Date:  2002-12       Impact factor: 2.026

4.  Orientation selectivity in macaque V1: diversity and laminar dependence.

Authors:  Dario L Ringach; Robert M Shapley; Michael J Hawken
Journal:  J Neurosci       Date:  2002-07-01       Impact factor: 6.167

5.  Substructure of direction-selective receptive fields in macaque V1.

Authors:  Margaret S Livingstone; Bevil R Conway
Journal:  J Neurophysiol       Date:  2003-05       Impact factor: 2.714

6.  Convergence properties of three spike-triggered analysis techniques.

Authors:  Liam Paninski
Journal:  Network       Date:  2003-08       Impact factor: 1.273

Review 7.  Mapping receptive fields in primary visual cortex.

Authors:  Dario L Ringach
Journal:  J Physiol       Date:  2004-05-21       Impact factor: 5.182

Review 8.  Multiple neural spike train data analysis: state-of-the-art and future challenges.

Authors:  Emery N Brown; Robert E Kass; Partha P Mitra
Journal:  Nat Neurosci       Date:  2004-05       Impact factor: 24.884

9.  Receptive field size in V1 neurons limits acuity for perceiving disparity modulation.

Authors:  Hendrikje Nienborg; Holly Bridge; Andrew J Parker; Bruce G Cumming
Journal:  J Neurosci       Date:  2004-03-03       Impact factor: 6.167

Review 10.  Statistical issues in the analysis of neuronal data.

Authors:  Robert E Kass; Valérie Ventura; Emery N Brown
Journal:  J Neurophysiol       Date:  2005-07       Impact factor: 2.714

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  1 in total

1.  nSTAT: open-source neural spike train analysis toolbox for Matlab.

Authors:  I Cajigas; W Q Malik; E N Brown
Journal:  J Neurosci Methods       Date:  2012-09-05       Impact factor: 2.390

  1 in total

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