Literature DB >> 22730194

Exome sequencing is an efficient tool for genetic screening of Charcot-Marie-Tooth disease.

Byung-Ok Choi1, Soo Kyung Koo, Mi-Hyun Park, Hwanseok Rhee, Song-Ju Yang, Kyoung-Gyu Choi, Sung-Chul Jung, Han Su Kim, Young Se Hyun, Khriezhanuo Nakhro, Hye Jin Lee, Hae-Mi Woo, Ki Wha Chung.   

Abstract

Charcot-Marie-Tooth disease (CMT) is one of the most common inherited neuropathies and is a genetically and clinically heterogeneous disorder with variable inheritance modes. As several molecules have been reported to have therapeutic effects on CMT, depending on the underlying genetic causes, exact genetic diagnostics have become very important for executing personalized therapy. Whole-exome sequencing has recently been introduced as an available method to identify rare or novel genetic defects from genetic disorders. Particularly, CMT is a model disease to apply exome sequencing because more than 50 genes (loci) are involved in its development with weak genotype-phenotype correlation. This study performed the exome sequencing in 25 unrelated CMT patients who revealed neither 17p12 duplication/deletion nor several major CMT genes. This study identified eight causative heterozygous mutations (32%). This detection rate seems rather high because each sample was tested before the study for major genetic causes. Therefore, this study suggests that the exome sequencing can be a highly exact, rapid, and economical molecular diagnostic tool for CMT patients who are tested for major genetic causes.
© 2012 Wiley Periodicals, Inc.

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Year:  2012        PMID: 22730194     DOI: 10.1002/humu.22143

Source DB:  PubMed          Journal:  Hum Mutat        ISSN: 1059-7794            Impact factor:   4.878


  53 in total

1.  Identification of Korean-specific SNP markers from whole-exome sequencing data.

Authors:  Sung Min Kim; Seong Yeon Yoo; Soo Hyun Nam; Jae Moon Lee; Ki Wha Chung
Journal:  Int J Legal Med       Date:  2016-02-09       Impact factor: 2.686

2.  Effective diagnosis of genetic disease by computational phenotype analysis of the disease-associated genome.

Authors:  Tomasz Zemojtel; Sebastian Köhler; Luisa Mackenroth; Marten Jäger; Jochen Hecht; Peter Krawitz; Luitgard Graul-Neumann; Sandra Doelken; Nadja Ehmke; Malte Spielmann; Nancy Christine Oien; Michal R Schweiger; Ulrike Krüger; Götz Frommer; Björn Fischer; Uwe Kornak; Ricarda Flöttmann; Amin Ardeshirdavani; Yves Moreau; Suzanna E Lewis; Melissa Haendel; Damian Smedley; Denise Horn; Stefan Mundlos; Peter N Robinson
Journal:  Sci Transl Med       Date:  2014-09-03       Impact factor: 17.956

3.  Clinical and histopathological study of Charcot-Marie-Tooth neuropathy with a novel S90W mutation in BSCL2.

Authors:  B-O Choi; M-H Park; K W Chung; H-M Woo; H Koo; H-K Chung; K-G Choi; K D Park; H J Lee; Y S Hyun; S K Koo
Journal:  Neurogenetics       Date:  2012-11-10       Impact factor: 2.660

4.  Molecular genetics of charcot-marie-tooth disease: from genes to genomes.

Authors:  H Azzedine; J Senderek; C Rivolta; R Chrast
Journal:  Mol Syndromol       Date:  2012-10-12

5.  Mutation analysis of MFN2, GJB1, MPZ and PMP22 in Italian patients with axonal Charcot-Marie-Tooth disease.

Authors:  Giorgia Bergamin; Francesca Boaretto; Chiara Briani; Elena Pegoraro; Mario Cacciavillani; Andrea Martinuzzi; Maria Muglia; Andrea Vettori; Giovanni Vazza; Maria Luisa Mostacciuolo
Journal:  Neuromolecular Med       Date:  2014-05-13       Impact factor: 3.843

6.  Dominant GDAP1 founder mutation is a common cause of axonal Charcot-Marie-Tooth disease in Finland.

Authors:  Mari Auranen; Emil Ylikallio; Jussi Toppila; Mirja Somer; Sari Kiuru-Enari; Henna Tyynismaa
Journal:  Neurogenetics       Date:  2013-03-03       Impact factor: 2.660

7.  Exome Sequence Analysis Suggests that Genetic Burden Contributes to Phenotypic Variability and Complex Neuropathy.

Authors:  Claudia Gonzaga-Jauregui; Tamar Harel; Tomasz Gambin; Maria Kousi; Laurie B Griffin; Ludmila Francescatto; Burcak Ozes; Ender Karaca; Shalini N Jhangiani; Matthew N Bainbridge; Kim S Lawson; Davut Pehlivan; Yuji Okamoto; Marjorie Withers; Pedro Mancias; Anne Slavotinek; Pamela J Reitnauer; Meryem T Goksungur; Michael Shy; Thomas O Crawford; Michel Koenig; Jason Willer; Brittany N Flores; Igor Pediaditrakis; Onder Us; Wojciech Wiszniewski; Yesim Parman; Anthony Antonellis; Donna M Muzny; Nicholas Katsanis; Esra Battaloglu; Eric Boerwinkle; Richard A Gibbs; James R Lupski
Journal:  Cell Rep       Date:  2015-08-06       Impact factor: 9.423

8.  Targeted next-generation sequencing reveals further genetic heterogeneity in axonal Charcot-Marie-Tooth neuropathy and a mutation in HSPB1.

Authors:  Emil Ylikallio; Mridul Johari; Svetlana Konovalova; Jukka S Moilanen; Sari Kiuru-Enari; Mari Auranen; Leila Pajunen; Henna Tyynismaa
Journal:  Eur J Hum Genet       Date:  2013-08-21       Impact factor: 4.246

Review 9.  Using drug response data to identify molecular effectors, and molecular "omic" data to identify candidate drugs in cancer.

Authors:  William C Reinhold; Sudhir Varma; Vinodh N Rajapakse; Augustin Luna; Fabricio Garmus Sousa; Kurt W Kohn; Yves G Pommier
Journal:  Hum Genet       Date:  2014-09-12       Impact factor: 4.132

10.  Whole exome sequencing in dominant cataract identifies a new causative factor, CRYBA2, and a variety of novel alleles in known genes.

Authors:  Linda M Reis; Rebecca C Tyler; Sanaa Muheisen; Victor Raggio; Leonardo Salviati; Dennis P Han; Deborah Costakos; Hagith Yonath; Sarah Hall; Patricia Power; Elena V Semina
Journal:  Hum Genet       Date:  2013-03-19       Impact factor: 4.132

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