Literature DB >> 22729823

A standard reaction condition and a single HPLC separation system are sufficient for estimation of monolignol biosynthetic pathway enzyme activities.

Jie Liu1, Rui Shi, Quanzi Li, Ronald R Sederoff, Vincent L Chiang.   

Abstract

Lignin content and composition are largely determined by the composition and quantity of the monolignol precursors. Individual enzymes of the monolignol biosynthetic pathway determine the composition and quantity of monolignols. Monolignol biosynthesis in angiosperms is mediated by ten enzyme families. We developed a method using a total protein extract (soluble and microsomal) for the comprehensive and simultaneous analysis of these ten enzyme activities in a single target tissue, stem differentiating xylem (SDX) of Populus trichocarpa. As little as 300 mg fresh weight of SDX is sufficient for triplicate assays of all ten enzyme activities. To expand the effectiveness of the analysis, we quantified the reaction products directly by HPLC and developed a universal method that can separate the substrates and products of all enzymes. The specific activities measured with this simple approach are similar to those obtained with the optimum conditions previously established for each individual enzyme. This approach is applicable to the enzyme activity analysis for both P. trichocarpa (angiosperm) and Pinus taeda (gymnosperm) and is particularly useful when a large number of samples need to be analyzed for all monolignol biosynthetic enzymes.

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Year:  2012        PMID: 22729823     DOI: 10.1007/s00425-012-1688-9

Source DB:  PubMed          Journal:  Planta        ISSN: 0032-0935            Impact factor:   4.116


  17 in total

1.  Membrane protein complexes catalyze both 4- and 3-hydroxylation of cinnamic acid derivatives in monolignol biosynthesis.

Authors:  Hsi-Chuan Chen; Quanzi Li; Christopher M Shuford; Jie Liu; David C Muddiman; Ronald R Sederoff; Vincent L Chiang
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-12       Impact factor: 11.205

2.  Comprehensive quantification of monolignol-pathway enzymes in Populus trichocarpa by protein cleavage isotope dilution mass spectrometry.

Authors:  Christopher M Shuford; Quanzi Li; Ying-Hsuan Sun; Hsi-Chuan Chen; Jack Wang; Rui Shi; Ronald R Sederoff; Vincent L Chiang; David C Muddiman
Journal:  J Proteome Res       Date:  2012-05-09       Impact factor: 4.466

3.  Specific down-regulation of PAL genes by artificial microRNAs in Populus trichocarpa.

Authors:  Rui Shi; Chenmin Yang; Shanfa Lu; Ronald Sederoff; Vincent L Chiang
Journal:  Planta       Date:  2010-08-20       Impact factor: 4.116

4.  Renewable resources for the production of fuels and chemicals.

Authors:  K V Sarkanen
Journal:  Science       Date:  1976-02-20       Impact factor: 47.728

5.  Coniferyl aldehyde 5-hydroxylation and methylation direct syringyl lignin biosynthesis in angiosperms.

Authors:  K Osakabe; C C Tsao; L Li; J L Popko; T Umezawa; D T Carraway; R H Smeltzer; C P Joshi; V L Chiang
Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-03       Impact factor: 11.205

6.  Secondary xylem-specific expression of caffeoyl-coenzyme A 3-O-methyltransferase plays an important role in the methylation pathway associated with lignin biosynthesis in loblolly pine.

Authors:  L Li; Y Osakabe; C P Joshi; V L Chiang
Journal:  Plant Mol Biol       Date:  1999-07       Impact factor: 4.076

7.  Clarification of cinnamoyl co-enzyme A reductase catalysis in monolignol biosynthesis of Aspen.

Authors:  Laigeng Li; Xiaofei Cheng; Shanfa Lu; Tomoyuki Nakatsubo; Toshiaki Umezawa; Vincent L Chiang
Journal:  Plant Cell Physiol       Date:  2005-05-03       Impact factor: 4.927

8.  Enzymatic synthesis and purification of aromatic coenzyme a esters.

Authors:  Till Beuerle; Eran Pichersky
Journal:  Anal Biochem       Date:  2002-03-15       Impact factor: 3.365

Review 9.  Lignin biosynthesis.

Authors:  Wout Boerjan; John Ralph; Marie Baucher
Journal:  Annu Rev Plant Biol       Date:  2003       Impact factor: 26.379

10.  Activities of some enzymes of lignin formation in reaction wood of Thuja orientalis, Metasequoia glyptostroboides and Robinia pseudoacacia.

Authors:  H Kutsuki; T Higuchi
Journal:  Planta       Date:  1981-07       Impact factor: 4.116

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  6 in total

1.  Regulation of phenylalanine ammonia-lyase (PAL) gene family in wood forming tissue of Populus trichocarpa.

Authors:  Rui Shi; Christopher M Shuford; Jack P Wang; Ying-Hsuan Sun; Zhichang Yang; Hsi-Chuan Chen; Sermsawat Tunlaya-Anukit; Quanzi Li; Jie Liu; David C Muddiman; Ronald R Sederoff; Vincent L Chiang
Journal:  Planta       Date:  2013-06-14       Impact factor: 4.116

2.  Complete proteomic-based enzyme reaction and inhibition kinetics reveal how monolignol biosynthetic enzyme families affect metabolic flux and lignin in Populus trichocarpa.

Authors:  Jack P Wang; Punith P Naik; Hsi-Chuan Chen; Rui Shi; Chien-Yuan Lin; Jie Liu; Christopher M Shuford; Quanzi Li; Ying-Hsuan Sun; Sermsawat Tunlaya-Anukit; Cranos M Williams; David C Muddiman; Joel J Ducoste; Ronald R Sederoff; Vincent L Chiang
Journal:  Plant Cell       Date:  2014-03-11       Impact factor: 11.277

3.  Monolignol pathway 4-coumaric acid:coenzyme A ligases in Populus trichocarpa: novel specificity, metabolic regulation, and simulation of coenzyme A ligation fluxes.

Authors:  Hsi-Chuan Chen; Jina Song; Cranos M Williams; Christopher M Shuford; Jie Liu; Jack P Wang; Quanzi Li; Rui Shi; Emine Gokce; Joel Ducoste; David C Muddiman; Ronald R Sederoff; Vincent L Chiang
Journal:  Plant Physiol       Date:  2013-01-23       Impact factor: 8.340

4.  Alteration of S-adenosylhomocysteine levels affects lignin biosynthesis in switchgrass.

Authors:  Zetao Bai; Tianxiong Qi; Yuchen Liu; Zhenying Wu; Lichao Ma; Wenwen Liu; Yingping Cao; Yan Bao; Chunxiang Fu
Journal:  Plant Biotechnol J       Date:  2018-06-06       Impact factor: 9.803

5.  Simultaneous regulation of F5H in COMT-RNAi transgenic switchgrass alters effects of COMT suppression on syringyl lignin biosynthesis.

Authors:  Zhenying Wu; Nengfei Wang; Hiroshi Hisano; Yingping Cao; Fengyan Wu; Wenwen Liu; Yan Bao; Zeng-Yu Wang; Chunxiang Fu
Journal:  Plant Biotechnol J       Date:  2018-10-24       Impact factor: 9.803

6.  Mutation of 4-coumarate: coenzyme A ligase 1 gene affects lignin biosynthesis and increases the cell wall digestibility in maize brown midrib5 mutants.

Authors:  Wangdan Xiong; Zhenying Wu; Yuchen Liu; Yu Li; Kunlong Su; Zetao Bai; Siyi Guo; Zhubing Hu; Zhiming Zhang; Yan Bao; Juan Sun; Guofeng Yang; Chunxiang Fu
Journal:  Biotechnol Biofuels       Date:  2019-04-10       Impact factor: 6.040

  6 in total

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