Literature DB >> 22725611

Enrichment and detection of rare proteins with aptamer-conjugated gold nanorods.

Emir Yasun1, Basri Gulbakan, Ismail Ocsoy, Quan Yuan, Mohammed Ibrahim Shukoor, Chunmei Li, Weihong Tan.   

Abstract

Rare protein enrichment and sensitive detection hold great potential in biomedical studies and clinical practice. This work describes the use of aptamer-conjugated gold nanorods for the efficient enrichment of rare proteins from buffer solutions and human plasma. Gold nanorod (AuNR) surfaces were modified with a long PEG chain and a 15-mer thrombin aptamer for protein enrichment and detection. Studies of the effect of surface modification on enrichment efficiency of thrombin showed that a change of only one EG(6) linker unit, i.e., from 2EG(6) to 3EG(6), could increase thrombin protein capture efficiency by up to 47%. Furthermore, a 1 ppm sample of thrombin in buffer could be enriched with around 90% efficiency using a low concentration (0.19 nM) of gold nanorod probe modified with 3EG(6) spacer, and with the same probe, effective capture was achieved down to 10 ppb (1 ng) thrombin in plasma samples. In addition to α-thrombin enrichment, prothrombin was also efficiently captured from plasma samples via gold nanorods conjugated with 15-mer thrombin aptamer. Our work demonstrates efficient enrichment of rare proteins using aptamer-modified nanomaterials, which can be used in biomarker discovery studies.

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Year:  2012        PMID: 22725611      PMCID: PMC3407574          DOI: 10.1021/ac300806s

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  36 in total

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Review 2.  The human plasma proteome: history, character, and diagnostic prospects.

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3.  A dual platform for selective analyte enrichment and ionization in mass spectrometry using aptamer-conjugated graphene oxide.

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6.  A novel proteomic screen for peptide-protein interactions.

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7.  Ultrasensitive detection of unstained proteins in acrylamide gels by native UV fluorescence.

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Journal:  Anal Chem       Date:  2003-01-01       Impact factor: 6.986

8.  Gold nanoparticles as selective and concentrating probes for samples in MALDI MS analysis.

Authors:  Chien-Hsun Teng; Kun-Chan Ho; Ya-Shiuan Lin; Yu-Chie Chen
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9.  Thrombin.

Authors:  R L Lundblad; H S Kingdon; K G Mann
Journal:  Methods Enzymol       Date:  1976       Impact factor: 1.600

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Journal:  J Am Chem Soc       Date:  2004-05-12       Impact factor: 15.419

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  14 in total

1.  BSA modification to reduce CTAB induced nonspecificity and cytotoxicity of aptamer-conjugated gold nanorods.

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Review 2.  Post-genomics nanotechnology is gaining momentum: nanoproteomics and applications in life sciences.

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3.  A disposable gold foil paper-based aptasensor for detection of enteropathogenic Escherichia coli with SERS analysis and magnetic separation technology.

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4.  Aptamer-conjugated multifunctional nanoflowers as a platform for targeting, capture, and detection in laser desorption ionization mass spectrometry.

Authors:  Ismail Ocsoy; Basri Gulbakan; Mohammed Ibrahim Shukoor; Xiangling Xiong; Tao Chen; David H Powell; Weihong Tan
Journal:  ACS Nano       Date:  2012-12-13       Impact factor: 15.881

Review 5.  Cancer cell sensing and therapy using affinity tag-conjugated gold nanorods.

Authors:  Emir Yasun; Huaizhi Kang; Huseyin Erdal; Sena Cansiz; Ismail Ocsoy; Yu-Fen Huang; Weihong Tan
Journal:  Interface Focus       Date:  2013-06-06       Impact factor: 3.906

Review 6.  Nucleic acid-functionalized transition metal nanosheets for biosensing applications.

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Journal:  Biosens Bioelectron       Date:  2016-03-18       Impact factor: 10.618

7.  DNAzyme-functionalized porous carbon nanospheres serve as a fluorescent nanoprobe for imaging detection of microRNA-21 and zinc ion in living cells.

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8.  A cell-targeted, size-photocontrollable, nuclear-uptake nanodrug delivery system for drug-resistant cancer therapy.

Authors:  Liping Qiu; Tao Chen; Ismail Öçsoy; Emir Yasun; Cuichen Wu; Guizhi Zhu; Mingxu You; Da Han; Jianhui Jiang; Ruqin Yu; Weihong Tan
Journal:  Nano Lett       Date:  2014-12-12       Impact factor: 11.189

9.  Fluorescence based Aptasensors for the determination of hepatitis B virus e antigen.

Authors:  Rongrong Huang; Zhijiang Xi; Yan Deng; Nongyue He
Journal:  Sci Rep       Date:  2016-08-08       Impact factor: 4.379

10.  Functional DNA-containing nanomaterials: cellular applications in biosensing, imaging, and targeted therapy.

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Journal:  Acc Chem Res       Date:  2014-04-29       Impact factor: 22.384

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