Literature DB >> 22721952

Two-step nucleation of amyloid fibrils: omnipresent or not?

Stefan Auer1, Piero Ricchiuto2, Dimo Kashchiev3.   

Abstract

Amyloid protein fibrils feature in various diseases and nanotechnological products. Currently, it is debated whether they nucleate in one step (i.e., directly from the protein solution) or in two steps (step one being the appearance of nonfibrillar oligomers in the solution and step two being the oligomer conversion into fibrils). We employ nucleation theory to gain insight into the idiosyncrasy of two-step fibril nucleation and to determine the conditions under which this process can take place. Presenting an expression for the rate of two-step fibril nucleation, we use it to qualitatively describe experimental data for two-step nucleated amyloid-β fibrils. Our analysis helps in understanding why, in some experiments, oligomers rather than fibrils form and remain structurally unchanged and why, in others, the oligomers convert into fibrils.
Copyright © 2012 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID: 22721952     DOI: 10.1016/j.jmb.2012.06.022

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  23 in total

1.  Protein Polymerization into Fibrils from the Viewpoint of Nucleation Theory.

Authors:  Dimo Kashchiev
Journal:  Biophys J       Date:  2015-11-17       Impact factor: 4.033

2.  Unmasking the roles of N- and C-terminal flanking sequences from exon 1 of huntingtin as modulators of polyglutamine aggregation.

Authors:  Scott L Crick; Kiersten M Ruff; Kanchan Garai; Carl Frieden; Rohit V Pappu
Journal:  Proc Natl Acad Sci U S A       Date:  2013-11-26       Impact factor: 11.205

Review 3.  Impact of membrane curvature on amyloid aggregation.

Authors:  Mayu S Terakawa; Yuxi Lin; Misaki Kinoshita; Shingo Kanemura; Dai Itoh; Toshihiko Sugiki; Masaki Okumura; Ayyalusamy Ramamoorthy; Young-Ho Lee
Journal:  Biochim Biophys Acta Biomembr       Date:  2018-04-28       Impact factor: 3.747

4.  Crucial role of nonspecific interactions in amyloid nucleation.

Authors:  Anđela Šarić; Yassmine C Chebaro; Tuomas P J Knowles; Daan Frenkel
Journal:  Proc Natl Acad Sci U S A       Date:  2014-12-01       Impact factor: 11.205

5.  Nucleation of polymorphic amyloid fibrils.

Authors:  Stefan Auer
Journal:  Biophys J       Date:  2015-03-10       Impact factor: 4.033

6.  True and apparent inhibition of amyloid fibril formation.

Authors:  Pedro M Martins
Journal:  Prion       Date:  2012-12-11       Impact factor: 3.931

7.  Quantitative analysis of the time course of Aβ oligomerization and subsequent growth steps using tetramethylrhodamine-labeled Aβ.

Authors:  Kanchan Garai; Carl Frieden
Journal:  Proc Natl Acad Sci U S A       Date:  2013-02-11       Impact factor: 11.205

8.  Design of multi-phase dynamic chemical networks.

Authors:  Chenrui Chen; Junjun Tan; Ming-Chien Hsieh; Ting Pan; Jay T Goodwin; Anil K Mehta; Martha A Grover; David G Lynn
Journal:  Nat Chem       Date:  2017-02-27       Impact factor: 24.427

Review 9.  Recent progress on understanding the mechanisms of amyloid nucleation.

Authors:  Eri Chatani; Naoki Yamamoto
Journal:  Biophys Rev       Date:  2017-12-06

Review 10.  Biomolecular Assemblies: Moving from Observation to Predictive Design.

Authors:  Corey J Wilson; Andreas S Bommarius; Julie A Champion; Yury O Chernoff; David G Lynn; Anant K Paravastu; Chen Liang; Ming-Chien Hsieh; Jennifer M Heemstra
Journal:  Chem Rev       Date:  2018-10-03       Impact factor: 60.622

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