Literature DB >> 22719678

3-Meth-oxy-4-methyl-1H-1,2,4-triazol-5(4H)-one monohydrate.

Wei Gao1, Xin-Ling Wang, Jing Yang, Xue-Fen Wu.   

Abstract

In the title hydrate, C(4)H(7)N(3)O(2)·H(2)O, all the non-H atoms lie on a crystallographic mirror plane. The H atoms of both methyl groups are disordered over two sets of sites. In the crystal, N-H⋯O(w) and O(w)-H⋯O(k) (w = water and k = ketone) hydrogen bonds link the components into (010) sheets.

Entities:  

Year:  2012        PMID: 22719678      PMCID: PMC3379480          DOI: 10.1107/S1600536812023380

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Jin et al. (2011 ▶); Liu & Liu (2011 ▶); Liu et al. (2011 ▶, 2012 ▶); Ustabaş et al. (2010) ▶. For bioactivity data, see Tan et al. (2012 ▶).

Experimental

Crystal data

C4H7N3O2·H2O M = 147.14 Orthorhombic, a = 6.810 (4) Å b = 6.506 (4) Å c = 15.277 (9) Å V = 676.9 (7) Å3 Z = 4 Mo Kα radiation μ = 0.12 mm−1 T = 113 K 0.20 × 0.18 × 0.14 mm

Data collection

Rigaku Saturn724 CCD diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005 ▶) T min = 0.976, T max = 0.983 6611 measured reflections 873 independent reflections 727 reflections with I > 2σ(I) R int = 0.048

Refinement

R[F 2 > 2σ(F 2)] = 0.032 wR(F 2) = 0.090 S = 1.01 873 reflections 72 parameters 4 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.23 e Å−3 Δρmin = −0.26 e Å−3 Data collection: CrystalClear (Rigaku/MSC, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: CrystalStructure (Rigaku/MSC, 2005 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812023380/hb6806sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812023380/hb6806Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812023380/hb6806Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C4H7N3O2·H2ODx = 1.444 Mg m3
Mr = 147.14Mo Kα radiation, λ = 0.71073 Å
Orthorhombic, PnmaCell parameters from 2353 reflections
a = 6.810 (4) Åθ = 3.0–27.8°
b = 6.506 (4) ŵ = 0.12 mm1
c = 15.277 (9) ÅT = 113 K
V = 676.9 (7) Å3Prism, colorless
Z = 40.20 × 0.18 × 0.14 mm
F(000) = 312
Rigaku Saturn724 CCD diffractometer873 independent reflections
Radiation source: rotating anode727 reflections with I > 2σ(I)
Multilayer monochromatorRint = 0.048
Detector resolution: 14.22 pixels mm-1θmax = 27.9°, θmin = 3.3°
ω and φ scansh = −8→8
Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005)k = −8→7
Tmin = 0.976, Tmax = 0.983l = −20→20
6611 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.032Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.090H atoms treated by a mixture of independent and constrained refinement
S = 1.01w = 1/[σ2(Fo2) + (0.0616P)2] where P = (Fo2 + 2Fc2)/3
873 reflections(Δ/σ)max = 0.003
72 parametersΔρmax = 0.23 e Å3
4 restraintsΔρmin = −0.26 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
O10.64561 (9)0.25000.35699 (4)0.02165 (15)
O20.49415 (9)0.25000.65038 (4)0.02269 (16)
N10.62148 (10)0.25000.50977 (4)0.01766 (17)
N20.35229 (11)0.25000.43609 (4)0.01895 (17)
N30.29539 (11)0.25000.52418 (5)0.01921 (18)
C10.54905 (11)0.25000.42578 (6)0.0172 (2)
C20.46308 (12)0.25000.56483 (6)0.0169 (2)
C40.82847 (13)0.25000.53342 (6)0.0235 (2)
H4A0.90600.19490.48470.035*0.50
H4B0.84810.16420.58540.035*0.50
H4C0.87070.39090.54610.035*0.50
C30.31615 (14)0.25000.70293 (6)0.0257 (2)
H3D0.25280.11510.69900.039*0.50
H3E0.22620.35580.68110.039*0.50
H3C0.34950.27910.76410.039*0.50
O30.04758 (10)0.25000.31776 (5)0.0449 (2)
H20.2590 (12)0.25000.3942 (6)0.034 (3)*
H3A0.0698 (13)0.25000.2619 (4)0.047 (4)*
H3B−0.0752 (9)0.25000.3306 (6)0.063 (4)*
U11U22U33U12U13U23
O10.0167 (3)0.0331 (3)0.0152 (3)0.0000.0026 (2)0.000
O20.0164 (3)0.0380 (4)0.0136 (3)0.0000.0014 (2)0.000
N10.0116 (3)0.0256 (4)0.0158 (3)0.0000.0001 (3)0.000
N20.0134 (3)0.0301 (4)0.0133 (3)0.000−0.0005 (3)0.000
N30.0152 (3)0.0273 (4)0.0151 (3)0.0000.0014 (3)0.000
C10.0154 (4)0.0183 (4)0.0179 (4)0.000−0.0004 (3)0.000
C20.0149 (4)0.0211 (4)0.0147 (4)0.0000.0011 (3)0.000
C40.0116 (4)0.0377 (5)0.0213 (4)0.000−0.0012 (3)0.000
C30.0212 (4)0.0394 (5)0.0166 (4)0.0000.0074 (3)0.000
O30.0155 (3)0.1026 (7)0.0165 (3)0.000−0.0008 (3)0.000
O1—C11.2397 (12)N3—C21.2999 (12)
O2—C21.3239 (13)C4—H4A0.9800
O2—C31.4540 (13)C4—H4B0.9800
N1—C21.3679 (12)C4—H4C0.9800
N1—C11.3746 (13)C3—H3D0.9800
N1—C41.4552 (14)C3—H3E0.9800
N2—C11.3492 (13)C3—H3C0.9800
N2—N31.4003 (12)O3—H3A0.867 (6)
N2—H20.901 (7)O3—H3B0.859 (6)
C2—O2—C3114.32 (7)N1—C4—H4A109.5
C2—N1—C1106.92 (8)N1—C4—H4B109.5
C2—N1—C4127.68 (8)H4A—C4—H4B109.5
C1—N1—C4125.41 (7)N1—C4—H4C109.5
C1—N2—N3112.77 (7)H4A—C4—H4C109.5
C1—N2—H2128.1 (6)H4B—C4—H4C109.5
N3—N2—H2119.1 (6)O2—C3—H3D109.5
C2—N3—N2102.47 (7)O2—C3—H3E109.5
O1—C1—N2128.74 (8)H3D—C3—H3E109.5
O1—C1—N1126.94 (8)O2—C3—H3C109.5
N2—C1—N1104.32 (7)H3D—C3—H3C109.5
N3—C2—O2127.74 (8)H3E—C3—H3C109.5
N3—C2—N1113.52 (9)H3A—O3—H3B113.2 (8)
O2—C2—N1118.75 (8)
C1—N2—N3—C20.0N2—N3—C2—N10.0
N3—N2—C1—O1180.0C3—O2—C2—N30.0
N3—N2—C1—N10.0C3—O2—C2—N1180.0
C2—N1—C1—O1180.0C1—N1—C2—N30.0
C4—N1—C1—O10.0C4—N1—C2—N3180.0
C2—N1—C1—N20.0C1—N1—C2—O2180.0
C4—N1—C1—N2180.0C4—N1—C2—O20.0
N2—N3—C2—O2180.0
D—H···AD—HH···AD···AD—H···A
N2—H2···O30.90 (1)1.85 (1)2.7520 (15)174 (1)
O3—H3A···O1i0.87 (1)1.89 (1)2.7518 (18)174 (1)
O3—H3B···O1ii0.86 (1)1.94 (1)2.8024 (18)179 (1)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2⋯O30.90 (1)1.85 (1)2.7520 (15)174 (1)
O3—H3A⋯O1i0.87 (1)1.89 (1)2.7518 (18)174 (1)
O3—H3B⋯O1ii0.86 (1)1.94 (1)2.8024 (18)179 (1)

Symmetry codes: (i) ; (ii) .

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