| Literature DB >> 22719645 |
R Archana, E Yamuna, K J Rajendra Prasad, A Thiruvalluvar, R J Butcher, Sushil K Gupta, Sema Oztürk Yildirim.
Abstract
In the title mol-ecule, C(13)H(12)ClNO, the dihedral angle between the benzene and pyrrole rings is 1.38 (9)°. The cyclo-heptene ring adopts a distorted twist chair and sofa conformation. Inter-molecular N-H⋯O hydrogen bonds form an R(2) (2)(10) loop in the crystal packing. Further, weak C-H⋯O and C-H⋯π (involving the benzene ring) inter-actions are found in the crystal structure.Entities:
Year: 2012 PMID: 22719645 PMCID: PMC3379447 DOI: 10.1107/S1600536812022945
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C13H12ClNO | |
| Monoclinic, | Melting point: 389 K |
| Hall symbol: -P 2yn | Mo |
| Cell parameters from 2495 reflections | |
| θ = 3.2–28.4° | |
| µ = 0.33 mm−1 | |
| β = 92.767 (3)° | |
| Block, colourless | |
| 0.40 × 0.30 × 0.30 mm |
| Agilent Xcalibur Ruby Gemini diffractometer | 2274 independent reflections |
| Radiation source: Enhance (Mo) X-ray Source | 1836 reflections with |
| Graphite monochromator | |
| Detector resolution: 10.5081 pixels mm-1 | θmax = 28.4°, θmin = 3.5° |
| ω scans | |
| Absorption correction: multi-scan | |
| 4977 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2274 reflections | (Δ/σ)max = 0.001 |
| 149 parameters | Δρmax = 0.27 e Å−3 |
| 0 restraints | Δρmin = −0.26 e Å−3 |
| Geometry. Bond distances, angles |
| Refinement. Refinement of |
| Cl2 | 0.59361 (4) | −0.24239 (8) | 0.08648 (3) | 0.0357 (2) | |
| O6 | 0.57812 (10) | 0.3697 (2) | 0.60006 (8) | 0.0280 (4) | |
| N5 | 0.56976 (12) | 0.2648 (3) | 0.42004 (10) | 0.0225 (5) | |
| C1 | 0.63668 (14) | −0.1524 (3) | 0.26774 (12) | 0.0244 (5) | |
| C2 | 0.58717 (14) | −0.0838 (3) | 0.18511 (12) | 0.0262 (5) | |
| C3 | 0.53084 (14) | 0.1108 (3) | 0.17503 (12) | 0.0275 (6) | |
| C4 | 0.52189 (15) | 0.2416 (3) | 0.24985 (12) | 0.0256 (5) | |
| C4A | 0.56937 (14) | 0.1720 (3) | 0.33521 (12) | 0.0223 (5) | |
| C5A | 0.62720 (14) | 0.1378 (3) | 0.48468 (11) | 0.0211 (5) | |
| C6 | 0.63461 (14) | 0.2152 (3) | 0.58029 (12) | 0.0229 (5) | |
| C7 | 0.71201 (15) | 0.1148 (3) | 0.65476 (12) | 0.0273 (5) | |
| C8 | 0.80230 (15) | −0.0440 (3) | 0.62766 (12) | 0.0258 (5) | |
| C9 | 0.75353 (15) | −0.2421 (3) | 0.58213 (12) | 0.0254 (5) | |
| C10 | 0.73457 (16) | −0.2246 (3) | 0.47726 (12) | 0.0254 (5) | |
| C10A | 0.66477 (13) | −0.0419 (3) | 0.44109 (12) | 0.0214 (5) | |
| C10B | 0.62718 (14) | −0.0218 (3) | 0.34549 (12) | 0.0220 (5) | |
| H1 | 0.67583 | −0.28293 | 0.27228 | 0.0293* | |
| H3 | 0.49882 | 0.15197 | 0.11609 | 0.0330* | |
| H4 | 0.48492 | 0.37398 | 0.24388 | 0.0307* | |
| H5 | 0.5389 (17) | 0.380 (3) | 0.4311 (14) | 0.031 (6)* | |
| H7A | 0.66192 | 0.04481 | 0.69880 | 0.0328* | |
| H7B | 0.75270 | 0.22911 | 0.68916 | 0.0328* | |
| H8A | 0.85431 | 0.02420 | 0.58455 | 0.0309* | |
| H8B | 0.84908 | −0.08411 | 0.68393 | 0.0309* | |
| H9A | 0.67922 | −0.27558 | 0.60929 | 0.0305* | |
| H9B | 0.80688 | −0.35980 | 0.59647 | 0.0305* | |
| H10A | 0.81089 | −0.21821 | 0.44992 | 0.0305* | |
| H10B | 0.69653 | −0.35477 | 0.45448 | 0.0305* |
| Cl2 | 0.0376 (3) | 0.0460 (3) | 0.0233 (2) | 0.0078 (2) | 0.0001 (2) | −0.0094 (2) |
| O6 | 0.0322 (7) | 0.0244 (7) | 0.0275 (7) | 0.0012 (5) | 0.0032 (5) | −0.0036 (6) |
| N5 | 0.0242 (8) | 0.0205 (8) | 0.0229 (8) | 0.0027 (7) | 0.0009 (6) | −0.0004 (7) |
| C1 | 0.0213 (8) | 0.0259 (9) | 0.0261 (9) | 0.0005 (8) | 0.0008 (7) | −0.0003 (8) |
| C2 | 0.0241 (9) | 0.0336 (10) | 0.0209 (9) | −0.0007 (8) | 0.0026 (7) | −0.0058 (8) |
| C3 | 0.0219 (9) | 0.0382 (11) | 0.0222 (9) | 0.0016 (8) | 0.0002 (7) | 0.0042 (8) |
| C4 | 0.0231 (8) | 0.0269 (10) | 0.0267 (9) | 0.0039 (8) | 0.0013 (7) | 0.0035 (8) |
| C4A | 0.0182 (8) | 0.0245 (9) | 0.0242 (9) | −0.0027 (7) | 0.0016 (7) | −0.0005 (8) |
| C5A | 0.0187 (8) | 0.0209 (9) | 0.0235 (8) | −0.0033 (7) | 0.0003 (6) | 0.0007 (7) |
| C6 | 0.0224 (8) | 0.0220 (9) | 0.0245 (9) | −0.0069 (7) | 0.0031 (7) | −0.0008 (7) |
| C7 | 0.0322 (9) | 0.0287 (10) | 0.0208 (9) | −0.0034 (8) | −0.0011 (7) | 0.0004 (8) |
| C8 | 0.0255 (9) | 0.0280 (10) | 0.0234 (9) | −0.0028 (8) | −0.0037 (7) | 0.0025 (8) |
| C9 | 0.0259 (9) | 0.0229 (9) | 0.0269 (9) | 0.0003 (7) | −0.0039 (8) | 0.0035 (8) |
| C10 | 0.0272 (9) | 0.0222 (9) | 0.0265 (9) | 0.0021 (7) | −0.0023 (7) | −0.0013 (8) |
| C10A | 0.0175 (8) | 0.0236 (9) | 0.0230 (9) | −0.0036 (7) | 0.0005 (6) | −0.0005 (7) |
| C10B | 0.0177 (8) | 0.0244 (9) | 0.0238 (8) | −0.0024 (7) | 0.0009 (7) | 0.0002 (8) |
| Cl2—C2 | 1.7525 (19) | C8—C9 | 1.522 (3) |
| O6—C6 | 1.226 (2) | C9—C10 | 1.525 (2) |
| N5—C4A | 1.361 (2) | C10—C10A | 1.500 (3) |
| N5—C5A | 1.384 (2) | C10A—C10B | 1.435 (2) |
| N5—H5 | 0.837 (19) | C1—H1 | 0.9500 |
| C1—C10B | 1.407 (3) | C3—H3 | 0.9500 |
| C1—C2 | 1.372 (2) | C4—H4 | 0.9500 |
| C2—C3 | 1.408 (3) | C7—H7A | 0.9900 |
| C3—C4 | 1.374 (3) | C7—H7B | 0.9900 |
| C4—C4A | 1.399 (2) | C8—H8A | 0.9900 |
| C4A—C10B | 1.412 (3) | C8—H8B | 0.9900 |
| C5A—C6 | 1.466 (2) | C9—H9A | 0.9900 |
| C5A—C10A | 1.389 (3) | C9—H9B | 0.9900 |
| C6—C7 | 1.512 (2) | C10—H10A | 0.9900 |
| C7—C8 | 1.524 (3) | C10—H10B | 0.9900 |
| C4A—N5—C5A | 109.50 (16) | C1—C10B—C10A | 133.14 (17) |
| C4A—N5—H5 | 124.8 (14) | C2—C1—H1 | 121.00 |
| C5A—N5—H5 | 125.7 (14) | C10B—C1—H1 | 121.00 |
| C2—C1—C10B | 117.39 (17) | C2—C3—H3 | 120.00 |
| Cl2—C2—C3 | 117.57 (13) | C4—C3—H3 | 120.00 |
| Cl2—C2—C1 | 119.41 (14) | C3—C4—H4 | 121.00 |
| C1—C2—C3 | 123.02 (17) | C4A—C4—H4 | 121.00 |
| C2—C3—C4 | 120.45 (16) | C6—C7—H7A | 107.00 |
| C3—C4—C4A | 117.35 (17) | C6—C7—H7B | 107.00 |
| N5—C4A—C4 | 129.78 (18) | C8—C7—H7A | 107.00 |
| N5—C4A—C10B | 107.77 (15) | C8—C7—H7B | 107.00 |
| C4—C4A—C10B | 122.44 (17) | H7A—C7—H7B | 107.00 |
| N5—C5A—C6 | 116.33 (16) | C7—C8—H8A | 109.00 |
| C6—C5A—C10A | 134.44 (16) | C7—C8—H8B | 109.00 |
| N5—C5A—C10A | 109.23 (15) | C9—C8—H8A | 109.00 |
| O6—C6—C7 | 118.84 (16) | C9—C8—H8B | 109.00 |
| C5A—C6—C7 | 122.28 (16) | H8A—C8—H8B | 108.00 |
| O6—C6—C5A | 118.86 (16) | C8—C9—H9A | 109.00 |
| C6—C7—C8 | 119.54 (15) | C8—C9—H9B | 109.00 |
| C7—C8—C9 | 114.57 (15) | C10—C9—H9A | 109.00 |
| C8—C9—C10 | 113.70 (15) | C10—C9—H9B | 109.00 |
| C9—C10—C10A | 116.94 (15) | H9A—C9—H9B | 108.00 |
| C5A—C10A—C10B | 105.96 (15) | C9—C10—H10A | 108.00 |
| C10—C10A—C10B | 122.67 (16) | C9—C10—H10B | 108.00 |
| C5A—C10A—C10 | 131.32 (16) | C10A—C10—H10A | 108.00 |
| C4A—C10B—C10A | 107.53 (16) | C10A—C10—H10B | 108.00 |
| C1—C10B—C4A | 119.33 (16) | H10A—C10—H10B | 107.00 |
| C5A—N5—C4A—C4 | −180.00 (18) | N5—C5A—C6—C7 | −168.77 (16) |
| C5A—N5—C4A—C10B | 0.65 (19) | C10A—C5A—C6—O6 | −169.76 (18) |
| C4A—N5—C5A—C6 | −179.61 (15) | C10A—C5A—C6—C7 | 12.0 (3) |
| C4A—N5—C5A—C10A | −0.2 (2) | N5—C5A—C10A—C10 | 177.14 (17) |
| C10B—C1—C2—Cl2 | −178.65 (13) | N5—C5A—C10A—C10B | −0.37 (19) |
| C10B—C1—C2—C3 | 1.6 (3) | C6—C5A—C10A—C10 | −3.6 (3) |
| C2—C1—C10B—C4A | −0.8 (2) | C6—C5A—C10A—C10B | 178.93 (18) |
| C2—C1—C10B—C10A | 178.53 (18) | O6—C6—C7—C8 | −166.26 (16) |
| Cl2—C2—C3—C4 | 179.40 (14) | C5A—C6—C7—C8 | 12.0 (3) |
| C1—C2—C3—C4 | −0.8 (3) | C6—C7—C8—C9 | −63.1 (2) |
| C2—C3—C4—C4A | −0.8 (3) | C7—C8—C9—C10 | 88.01 (18) |
| C3—C4—C4A—N5 | −177.70 (17) | C8—C9—C10—C10A | −52.9 (2) |
| C3—C4—C4A—C10B | 1.6 (3) | C9—C10—C10A—C5A | 11.6 (3) |
| N5—C4A—C10B—C1 | 178.59 (15) | C9—C10—C10A—C10B | −171.28 (16) |
| N5—C4A—C10B—C10A | −0.87 (19) | C5A—C10A—C10B—C1 | −178.59 (18) |
| C4—C4A—C10B—C1 | −0.8 (3) | C5A—C10A—C10B—C4A | 0.75 (19) |
| C4—C4A—C10B—C10A | 179.72 (16) | C10—C10A—C10B—C1 | 3.6 (3) |
| N5—C5A—C6—O6 | 9.5 (2) | C10—C10A—C10B—C4A | −177.02 (15) |
| H··· | ||||
| N5—H5···O6i | 0.837 (19) | 2.13 (2) | 2.904 (2) | 153.2 (19) |
| C9—H9 | 0.99 | 2.55 | 3.228 (2) | 125 |
| C7—H7 | 0.99 | 2.95 | 3.7969 (19) | 144 |
Hydrogen-bond geometry (Å, °)
Cg2 is the centroid of the C1–C4,C4A,C10B ring.
| H⋯ | ||||
|---|---|---|---|---|
| N5—H5⋯O6i | 0.837 (19) | 2.13 (2) | 2.904 (2) | 153.2 (19) |
| C9—H9 | 0.99 | 2.55 | 3.228 (2) | 125 |
| C7—H7 | 0.99 | 2.95 | 3.7969 (19) | 144 |
Symmetry codes: (i) ; (ii) ; (iii) .