Literature DB >> 21754722

5-Methyl-7,8,9,10-tetra-hydro-cyclo-hepta-[b]indol-6(5H)-one.

R Archana, E Yamuna, K J Rajendra Prasad, A Thiruvalluvar, R J Butcher.   

Abstract

In the title mol-ecule, C(14)H(15)NO, the dihedral angle between the benzene and pyrrole rings is 1.99 (12)°. The cyclo-heptene ring adopts a slightly distorted boat conformation.

Entities:  

Year:  2011        PMID: 21754722      PMCID: PMC3120537          DOI: 10.1107/S1600536811016229

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the inter­est and importance of indole derivatives, see: Csomós et al. (2007 ▶). For pyrido-fused cyclo­hept[b]indole alkaloids, see: Bennasar et al. (1997 ▶). For crystallographic studies of cyclo­hept[b]indoles, see: Archana et al. (2010 ▶).

Experimental

Crystal data

C14H15NO M = 213.27 Orthorhombic, a = 8.6999 (2) Å b = 14.1805 (3) Å c = 9.1392 (3) Å V = 1127.49 (5) Å3 Z = 4 Cu Kα radiation μ = 0.62 mm−1 T = 295 K 0.47 × 0.35 × 0.20 mm

Data collection

Oxford Diffraction Xcalibur Ruby Gemini diffractometer Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2010 ▶) T min = 0.803, T max = 1.000 1184 measured reflections 1184 independent reflections 1148 reflections with I > 2σ(I) R int = 0.020

Refinement

R[F 2 > 2σ(F 2)] = 0.037 wR(F 2) = 0.106 S = 1.07 1184 reflections 147 parameters 1 restraint H-atom parameters constrained Δρmax = 0.14 e Å−3 Δρmin = −0.13 e Å−3 Data collection: CrysAlis PRO (Oxford Diffraction, 2010 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536811016229/hg5032sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536811016229/hg5032Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536811016229/hg5032Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H15NODx = 1.256 Mg m3
Mr = 213.27Melting point: 338 K
Orthorhombic, Pca21Cu Kα radiation, λ = 1.54184 Å
Hall symbol: P 2c -2acCell parameters from 2006 reflections
a = 8.6999 (2) Åθ = 4.8–73.4°
b = 14.1805 (3) ŵ = 0.62 mm1
c = 9.1392 (3) ÅT = 295 K
V = 1127.49 (5) Å3Chunk, pale-yellow
Z = 40.47 × 0.35 × 0.20 mm
F(000) = 456
Oxford Diffraction Xcalibur Ruby Gemini diffractometer1184 independent reflections
Radiation source: Enhance (Cu) X-ray Source1148 reflections with I > 2σ(I)
graphiteRint = 0.020
Detector resolution: 10.5081 pixels mm-1θmax = 73.6°, θmin = 6.0°
ω scansh = 0→10
Absorption correction: multi-scan (CrysAlis PRO; Oxford Diffraction, 2010)k = 0→17
Tmin = 0.803, Tmax = 1.000l = 0→11
1184 measured reflections
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH-atom parameters constrained
R[F2 > 2σ(F2)] = 0.037w = 1/[σ2(Fo2) + (0.0678P)2 + 0.0651P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.106(Δ/σ)max = 0.001
S = 1.07Δρmax = 0.14 e Å3
1184 reflectionsΔρmin = −0.13 e Å3
147 parametersExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
1 restraintExtinction coefficient: 0.018 (2)
Primary atom site location: structure-invariant direct methodsAbsolute structure: see Refinement section in Supplementary materials
Secondary atom site location: difference Fourier map
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O60.5677 (3)0.05292 (17)0.4636 (4)0.1141 (10)
N50.4250 (2)0.18603 (13)0.6610 (2)0.0514 (5)
C10.4932 (3)0.42768 (16)0.7515 (3)0.0607 (8)
C20.3719 (3)0.4495 (2)0.8403 (4)0.0792 (10)
C30.2600 (4)0.3822 (2)0.8755 (4)0.0826 (10)
C40.2661 (3)0.2923 (2)0.8220 (3)0.0686 (9)
C4A0.3895 (2)0.26879 (16)0.7301 (2)0.0512 (7)
C50.3392 (3)0.09825 (18)0.6805 (4)0.0791 (10)
C5A0.5637 (3)0.19791 (14)0.5882 (2)0.0471 (6)
C60.6360 (4)0.12408 (16)0.4995 (3)0.0637 (9)
C70.7989 (3)0.13870 (18)0.4529 (3)0.0669 (9)
C80.9072 (3)0.1731 (2)0.5724 (3)0.0713 (9)
C90.9058 (3)0.2786 (2)0.6046 (3)0.0647 (8)
C100.7621 (3)0.33087 (14)0.5528 (3)0.0533 (6)
C10A0.6154 (2)0.28910 (14)0.6081 (2)0.0431 (5)
C10B0.5048 (2)0.33542 (14)0.6960 (2)0.0458 (6)
H10.566610.472930.728210.0728*
H20.363410.510210.878080.0950*
H30.179450.399070.937040.0989*
H40.190980.248190.845670.0823*
H5A0.258450.107900.750520.1184*
H5B0.295410.079360.588580.1184*
H5C0.407220.049860.715070.1184*
H7A0.838140.079580.414760.0803*
H7B0.800200.184090.373510.0803*
H8A0.882230.139880.662080.0856*
H8B1.011130.155350.545430.0856*
H9A0.915960.287530.709400.0776*
H9B0.994870.307080.558570.0776*
H10A0.760180.330720.446690.0640*
H10B0.768280.395990.584760.0640*
U11U22U33U12U13U23
O60.131 (2)0.0782 (13)0.133 (2)−0.0248 (14)0.030 (2)−0.0505 (16)
N50.0472 (9)0.0535 (9)0.0534 (10)−0.0053 (7)−0.0045 (8)0.0057 (8)
C10.0620 (13)0.0556 (12)0.0644 (14)0.0153 (10)−0.0049 (12)−0.0035 (11)
C20.0837 (19)0.0764 (16)0.0774 (18)0.0354 (15)0.0030 (16)−0.0123 (16)
C30.0671 (15)0.111 (2)0.0696 (17)0.0405 (18)0.0133 (15)0.0049 (17)
C40.0442 (12)0.0964 (17)0.0652 (15)0.0115 (12)0.0043 (11)0.0162 (15)
C4A0.0408 (10)0.0643 (12)0.0486 (12)0.0048 (9)−0.0069 (9)0.0089 (10)
C50.0732 (17)0.0691 (14)0.095 (2)−0.0234 (13)−0.0062 (17)0.0152 (16)
C5A0.0508 (11)0.0484 (10)0.0421 (10)0.0017 (8)−0.0035 (9)0.0048 (9)
C60.0855 (18)0.0514 (12)0.0541 (14)0.0054 (11)−0.0011 (13)−0.0046 (10)
C70.0838 (18)0.0654 (13)0.0514 (13)0.0252 (12)0.0133 (13)0.0021 (11)
C80.0639 (14)0.0833 (17)0.0668 (16)0.0278 (13)0.0048 (13)0.0131 (15)
C90.0421 (11)0.0857 (16)0.0663 (15)0.0022 (11)0.0033 (11)0.0069 (14)
C100.0538 (11)0.0519 (9)0.0542 (13)−0.0005 (9)0.0045 (10)0.0087 (9)
C10A0.0436 (10)0.0438 (8)0.0418 (10)0.0050 (7)−0.0036 (8)0.0043 (8)
C10B0.0421 (10)0.0506 (10)0.0448 (11)0.0083 (7)−0.0055 (8)0.0029 (8)
O6—C61.216 (4)C10A—C10B1.415 (3)
N5—C4A1.368 (3)C1—H10.9300
N5—C51.462 (3)C2—H20.9300
N5—C5A1.388 (3)C3—H30.9300
C1—C21.367 (4)C4—H40.9300
C1—C10B1.407 (3)C5—H5A0.9600
C2—C31.401 (4)C5—H5B0.9600
C3—C41.366 (4)C5—H5C0.9600
C4—C4A1.403 (3)C7—H7A0.9700
C4A—C10B1.413 (3)C7—H7B0.9700
C5A—C61.466 (3)C8—H8A0.9700
C5A—C10A1.381 (3)C8—H8B0.9700
C6—C71.494 (4)C9—H9A0.9700
C7—C81.523 (4)C9—H9B0.9700
C8—C91.525 (4)C10—H10A0.9700
C9—C101.529 (4)C10—H10B0.9700
C10—C10A1.495 (3)
C4A—N5—C5123.97 (19)C2—C3—H3119.00
C4A—N5—C5A108.26 (17)C4—C3—H3119.00
C5—N5—C5A127.26 (19)C3—C4—H4121.00
C2—C1—C10B118.7 (2)C4A—C4—H4121.00
C1—C2—C3121.3 (3)N5—C5—H5A109.00
C2—C3—C4121.8 (3)N5—C5—H5B109.00
C3—C4—C4A117.8 (3)N5—C5—H5C110.00
N5—C4A—C4130.8 (2)H5A—C5—H5B109.00
N5—C4A—C10B108.16 (16)H5A—C5—H5C109.00
C4—C4A—C10B121.1 (2)H5B—C5—H5C109.00
N5—C5A—C6123.5 (2)C6—C7—H7A108.00
N5—C5A—C10A109.49 (18)C6—C7—H7B108.00
C6—C5A—C10A127.0 (2)C8—C7—H7A108.00
O6—C6—C5A122.2 (3)C8—C7—H7B108.00
O6—C6—C7120.1 (3)H7A—C7—H7B107.00
C5A—C6—C7117.7 (2)C7—C8—H8A108.00
C6—C7—C8115.3 (2)C7—C8—H8B108.00
C7—C8—C9116.6 (2)C9—C8—H8A108.00
C8—C9—C10115.0 (2)C9—C8—H8B108.00
C9—C10—C10A113.67 (19)H8A—C8—H8B107.00
C5A—C10A—C10127.19 (19)C8—C9—H9A109.00
C5A—C10A—C10B106.73 (17)C8—C9—H9B109.00
C10—C10A—C10B126.05 (18)C10—C9—H9A108.00
C1—C10B—C4A119.44 (18)C10—C9—H9B108.00
C1—C10B—C10A133.24 (19)H9A—C9—H9B108.00
C4A—C10B—C10A107.31 (17)C9—C10—H10A109.00
C2—C1—H1121.00C9—C10—H10B109.00
C10B—C1—H1121.00C10A—C10—H10A109.00
C1—C2—H2119.00C10A—C10—H10B109.00
C3—C2—H2119.00H10A—C10—H10B108.00
C5—N5—C4A—C4−4.8 (4)N5—C5A—C6—O612.5 (4)
C5—N5—C4A—C10B174.5 (2)N5—C5A—C6—C7−167.6 (2)
C5A—N5—C4A—C4−177.2 (2)C10A—C5A—C6—O6−164.4 (3)
C5A—N5—C4A—C10B2.2 (2)C10A—C5A—C6—C715.4 (4)
C4A—N5—C5A—C6−178.7 (2)N5—C5A—C10A—C10177.9 (2)
C4A—N5—C5A—C10A−1.3 (2)N5—C5A—C10A—C10B−0.1 (2)
C5—N5—C5A—C69.3 (4)C6—C5A—C10A—C10−4.8 (4)
C5—N5—C5A—C10A−173.3 (2)C6—C5A—C10A—C10B177.2 (2)
C10B—C1—C2—C3−0.4 (5)O6—C6—C7—C8−134.4 (3)
C2—C1—C10B—C4A1.6 (3)C5A—C6—C7—C845.7 (3)
C2—C1—C10B—C10A−177.2 (2)C6—C7—C8—C9−81.6 (3)
C1—C2—C3—C4−0.6 (5)C7—C8—C9—C1019.9 (3)
C2—C3—C4—C4A0.3 (5)C8—C9—C10—C10A54.1 (3)
C3—C4—C4A—N5−179.7 (3)C9—C10—C10A—C5A−57.7 (3)
C3—C4—C4A—C10B1.0 (4)C9—C10—C10A—C10B119.9 (2)
N5—C4A—C10B—C1178.60 (19)C5A—C10A—C10B—C1−179.6 (2)
N5—C4A—C10B—C10A−2.3 (2)C5A—C10A—C10B—C4A1.5 (2)
C4—C4A—C10B—C1−2.0 (3)C10—C10A—C10B—C12.4 (4)
C4—C4A—C10B—C10A177.16 (19)C10—C10A—C10B—C4A−176.58 (19)
  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  2,5-Dimethyl-7,8,9,10-tetra-hydro-cyclo-hepta-[b]indol-6(5H)-one.

Authors:  R Archana; E Yamuna; K J Rajendra Prasad; A Thiruvalluvar; R J Butcher
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-10-23

3.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  3 in total
  1 in total

1.  2-Chloro-7,8,9,10-tetra-hydro-cyclo-hepta-[b]indol-6(5H)-one.

Authors:  R Archana; E Yamuna; K J Rajendra Prasad; A Thiruvalluvar; R J Butcher; Sushil K Gupta; Sema Oztürk Yildirim
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-05-26
  1 in total

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