Literature DB >> 22719591

(E)-2-[2-(4-Chloro-benzyl-idene)hydrazin-yl]-4-[3-(morpholin-4-ium-4-yl)propyl-amino]-quinazolin-1-ium bis-(perchlorate).

Nan Jiang, Jian Zuo, Wenmin Zhu, Xinjie Zhao, Xin Zhai.   

Abstract

In the title compound, C(22)H(27)ClN(6)O(2) (2+)·2ClO(4) (-), the mol-ecule adopts an E conformation about the C=N double bond. The quinazoline ring is approximately planar, with an r.m.s. deviation of 0.0432 Å, and forms a dihedral angle of 5.77 (4)° with the chloro-phenyl ring. The crystal packing features N-H⋯O hydrogen bonds.

Entities:  

Year:  2012        PMID: 22719591      PMCID: PMC3379393          DOI: 10.1107/S1600536812021678

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For anti­tumor background to a similar compound, see: Abouzid & Shouman (2008 ▶); Zhang et al. (2008 ▶); An et al. (2010 ▶); Horiuchi et al. (2009 ▶).

Experimental

Crystal data

C22H27ClN6O22ClO4 M = 625.85 Monoclinic, a = 16.1835 (7) Å b = 11.6719 (4) Å c = 16.7332 (6) Å β = 112.127 (3)° V = 2927.98 (19) Å3 Z = 4 Mo Kα radiation μ = 0.37 mm−1 T = 293 K 0.28 × 0.26 × 0.23 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.903, T max = 0.920 16024 measured reflections 5127 independent reflections 2840 reflections with I > 2σ(I) R int = 0.083

Refinement

R[F 2 > 2σ(F 2)] = 0.070 wR(F 2) = 0.215 S = 1.02 5127 reflections 361 parameters 6 restraints H-atom parameters constrained Δρmax = 1.13 e Å−3 Δρmin = −0.49 e Å−3 Data collection: SMART (Bruker, 1997 ▶); cell refinement: SAINT (Bruker, 1997 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812021678/vm2162sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812021678/vm2162Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812021678/vm2162Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C22H27ClN6O2+·2ClO4F(000) = 1296
Mr = 625.85Dx = 1.420 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 1056 reflections
a = 16.1835 (7) Åθ = 3.0–19.4°
b = 11.6719 (4) ŵ = 0.37 mm1
c = 16.7332 (6) ÅT = 293 K
β = 112.127 (3)°Block, colorless
V = 2927.98 (19) Å30.28 × 0.26 × 0.23 mm
Z = 4
Bruker SMART CCD area-detector diffractometer5127 independent reflections
Radiation source: fine-focus sealed tube2840 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.083
phi and ω scansθmax = 25.0°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −17→19
Tmin = 0.903, Tmax = 0.920k = −13→13
16024 measured reflectionsl = −19→19
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.070Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.215H-atom parameters constrained
S = 1.02w = 1/[σ2(Fo2) + (0.1136P)2] where P = (Fo2 + 2Fc2)/3
5127 reflections(Δ/σ)max < 0.001
361 parametersΔρmax = 1.13 e Å3
6 restraintsΔρmin = −0.49 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.48875 (8)0.24389 (10)0.24289 (8)0.0469 (4)
Cl20.58604 (10)0.68187 (13)0.08849 (9)0.0604 (4)
Cl30.64366 (10)0.15934 (13)0.86537 (9)0.0617 (5)
O10.4762 (4)0.6658 (6)0.0106 (5)0.149 (3)
O20.6449 (3)0.6308 (5)0.0545 (3)0.0987 (17)
O30.5925 (4)0.8078 (4)0.0946 (3)0.1027 (17)
O40.5874 (3)0.6329 (5)0.1671 (3)0.0980 (17)
O50.4191 (4)0.3417 (5)0.1669 (4)0.126 (2)
O60.4327 (3)0.1461 (3)0.2421 (3)0.0737 (13)
O70.5211 (2)0.3043 (3)0.3255 (2)0.0542 (10)
O80.5596 (2)0.2153 (3)0.2142 (3)0.0590 (10)
C10.8016 (4)0.9059 (5)0.1749 (4)0.0554 (15)
H1A0.85560.94530.21080.066*
H1B0.81100.82430.18550.066*
C20.7831 (5)0.9304 (5)0.0821 (4)0.0679 (18)
H2A0.83330.90560.06820.082*
H2B0.73090.88780.04610.082*
O90.7683 (3)1.0492 (3)0.0646 (3)0.0625 (11)
C30.6953 (4)1.0882 (5)0.0842 (4)0.0642 (17)
H4A0.64151.04900.04760.077*
H4B0.68691.16960.07200.077*
C40.7095 (4)1.0676 (4)0.1775 (3)0.0478 (13)
H5A0.76031.11180.21440.057*
H5B0.65741.09250.18800.057*
C50.7460 (3)0.9167 (4)0.2914 (3)0.0446 (12)
H6A0.80300.95080.32590.054*
H6B0.75220.83430.29880.054*
C60.6766 (3)0.9576 (4)0.3258 (3)0.0423 (12)
H7A0.67191.04030.32040.051*
H7B0.69700.93900.38670.051*
C70.5840 (3)0.9055 (4)0.2798 (3)0.0420 (12)
H8A0.56030.93100.22020.050*
H8B0.58920.82270.27980.050*
C80.5128 (3)0.8816 (4)0.3846 (3)0.0336 (11)
C90.4407 (3)0.9074 (4)0.4136 (3)0.0301 (10)
C100.3748 (3)0.9904 (4)0.3750 (3)0.0399 (12)
H11A0.37811.03620.33080.048*
C110.3050 (3)1.0038 (4)0.4028 (3)0.0444 (12)
H12A0.26091.05790.37660.053*
C120.3006 (3)0.9370 (4)0.4695 (3)0.0393 (12)
H13A0.25340.94650.48780.047*
C130.3654 (3)0.8568 (4)0.5088 (3)0.0399 (12)
H14A0.36260.81300.55410.048*
C140.4347 (3)0.8417 (4)0.4807 (3)0.0303 (10)
C150.5601 (3)0.7361 (4)0.4838 (3)0.0334 (11)
C160.6585 (3)0.4948 (4)0.6029 (3)0.0376 (11)
H17A0.70370.48660.58160.045*
C170.6528 (3)0.4124 (4)0.6663 (3)0.0328 (10)
C180.5837 (3)0.4168 (4)0.6972 (3)0.0396 (12)
H19A0.53930.47200.67620.047*
C190.5810 (3)0.3391 (4)0.7588 (3)0.0411 (12)
H20A0.53580.34270.78040.049*
C200.6469 (3)0.2561 (4)0.7877 (3)0.0394 (12)
C210.7143 (3)0.2505 (4)0.7574 (3)0.0416 (12)
H22A0.75820.19460.77770.050*
C220.7164 (3)0.3291 (4)0.6964 (3)0.0413 (12)
H23A0.76200.32520.67540.050*
N10.7255 (3)0.9444 (3)0.1983 (2)0.0391 (10)
H1C0.67590.90480.16560.047*
N20.5224 (3)0.9373 (3)0.3206 (2)0.0395 (10)
H2C0.48980.99700.30130.047*
N30.5702 (2)0.7942 (3)0.4196 (2)0.0365 (9)
N40.4993 (2)0.7581 (3)0.5177 (2)0.0345 (9)
H4C0.50000.72080.56230.041*
N50.6164 (3)0.6481 (3)0.5155 (3)0.0417 (10)
H5C0.65960.63620.49840.050*
N60.6038 (3)0.5771 (3)0.5758 (2)0.0380 (9)
U11U22U33U12U13U23
Cl10.0417 (7)0.0481 (8)0.0541 (8)0.0074 (6)0.0216 (6)0.0159 (6)
Cl20.0563 (9)0.0753 (11)0.0496 (9)0.0027 (7)0.0201 (7)−0.0064 (7)
Cl30.0664 (10)0.0636 (9)0.0556 (9)0.0047 (7)0.0238 (7)0.0238 (7)
O10.099 (5)0.156 (6)0.161 (6)0.003 (4)0.013 (4)−0.023 (5)
O20.073 (3)0.165 (5)0.072 (3)0.045 (3)0.043 (3)0.001 (3)
O30.111 (4)0.071 (3)0.107 (4)−0.028 (3)0.020 (3)−0.027 (3)
O40.089 (3)0.149 (5)0.074 (3)0.048 (3)0.051 (3)0.051 (3)
O50.126 (5)0.122 (5)0.111 (4)0.023 (4)0.025 (4)0.041 (4)
O60.055 (2)0.056 (2)0.107 (3)−0.0075 (19)0.027 (2)0.030 (2)
O70.059 (2)0.075 (3)0.035 (2)0.0039 (19)0.0237 (18)0.0051 (18)
O80.048 (2)0.063 (2)0.078 (3)0.0027 (18)0.038 (2)−0.011 (2)
C10.064 (4)0.054 (3)0.066 (4)0.027 (3)0.045 (3)0.019 (3)
C20.094 (5)0.058 (4)0.077 (4)0.022 (3)0.062 (4)0.017 (3)
O90.078 (3)0.059 (2)0.075 (3)0.023 (2)0.057 (2)0.026 (2)
C30.074 (4)0.067 (4)0.068 (4)0.028 (3)0.045 (3)0.028 (3)
C40.060 (3)0.034 (3)0.060 (3)0.011 (2)0.034 (3)0.011 (2)
C50.043 (3)0.054 (3)0.038 (3)0.001 (2)0.017 (2)0.010 (2)
C60.047 (3)0.047 (3)0.041 (3)−0.006 (2)0.026 (2)−0.003 (2)
C70.047 (3)0.049 (3)0.037 (3)−0.004 (2)0.024 (2)0.003 (2)
C80.037 (3)0.035 (3)0.031 (3)−0.008 (2)0.015 (2)−0.002 (2)
C90.031 (2)0.032 (2)0.028 (2)−0.0028 (19)0.012 (2)−0.0032 (19)
C100.045 (3)0.039 (3)0.038 (3)0.001 (2)0.017 (2)0.006 (2)
C110.039 (3)0.049 (3)0.046 (3)0.008 (2)0.016 (2)0.002 (2)
C120.036 (3)0.049 (3)0.037 (3)0.001 (2)0.018 (2)0.000 (2)
C130.041 (3)0.044 (3)0.036 (3)−0.002 (2)0.017 (2)0.001 (2)
C140.034 (2)0.032 (2)0.026 (2)−0.004 (2)0.013 (2)−0.0028 (19)
C150.035 (3)0.036 (3)0.030 (3)−0.002 (2)0.014 (2)0.000 (2)
C160.040 (3)0.038 (3)0.038 (3)0.000 (2)0.018 (2)−0.001 (2)
C170.037 (3)0.031 (2)0.032 (2)0.003 (2)0.016 (2)−0.0003 (19)
C180.039 (3)0.036 (3)0.044 (3)0.008 (2)0.016 (2)0.009 (2)
C190.040 (3)0.045 (3)0.042 (3)−0.001 (2)0.020 (2)0.000 (2)
C200.046 (3)0.036 (3)0.034 (3)−0.004 (2)0.012 (2)0.004 (2)
C210.043 (3)0.041 (3)0.038 (3)0.009 (2)0.012 (2)0.005 (2)
C220.040 (3)0.042 (3)0.045 (3)0.006 (2)0.020 (2)0.000 (2)
N10.045 (2)0.036 (2)0.043 (2)0.0045 (18)0.024 (2)0.0054 (18)
N20.045 (2)0.040 (2)0.042 (2)0.0005 (18)0.025 (2)0.0079 (18)
N30.038 (2)0.043 (2)0.033 (2)0.0021 (19)0.0182 (18)0.0058 (18)
N40.042 (2)0.038 (2)0.030 (2)0.0042 (18)0.0201 (18)0.0085 (17)
N50.045 (2)0.043 (2)0.045 (2)0.0109 (19)0.026 (2)0.0099 (19)
N60.048 (2)0.034 (2)0.037 (2)0.0015 (19)0.021 (2)0.0052 (17)
Cl1—O81.440 (3)C8—N31.355 (6)
Cl1—O61.455 (4)C8—C91.455 (6)
Cl1—O71.462 (4)C9—C141.393 (6)
Cl1—O51.764 (5)C9—C101.404 (6)
Cl2—O21.412 (4)C10—C111.384 (6)
Cl2—O41.427 (4)C10—H11A0.9300
Cl2—O31.474 (5)C11—C121.385 (7)
Cl2—O11.774 (7)C11—H12A0.9300
Cl3—C201.737 (5)C12—C131.374 (6)
C1—C21.493 (7)C12—H13A0.9300
C1—N11.496 (6)C13—C141.382 (6)
C1—H1A0.9700C13—H14A0.9300
C1—H1B0.9700C14—N41.393 (6)
C2—O91.418 (6)C15—N31.331 (5)
C2—H2A0.9700C15—N41.332 (5)
C2—H2B0.9700C15—N51.343 (6)
O9—C31.415 (6)C16—N61.269 (6)
C3—C41.509 (7)C16—C171.461 (6)
C3—H4A0.9700C16—H17A0.9300
C3—H4B0.9700C17—C221.366 (6)
C4—N11.478 (6)C17—C181.398 (6)
C4—H5A0.9700C18—C191.387 (6)
C4—H5B0.9700C18—H19A0.9300
C5—N11.500 (6)C19—C201.387 (7)
C5—C61.518 (6)C19—H20A0.9300
C5—H6A0.9700C20—C211.366 (7)
C5—H6B0.9700C21—C221.383 (6)
C6—C71.530 (7)C21—H22A0.9300
C6—H7A0.9700C22—H23A0.9300
C6—H7B0.9700N1—H1C0.9100
C7—N21.453 (6)N2—H2C0.8600
C7—H8A0.9700N4—H4C0.8600
C7—H8B0.9700N5—N61.379 (5)
C8—N21.311 (5)N5—H5C0.8600
O8—Cl1—O6112.8 (2)C14—C9—C8117.6 (4)
O8—Cl1—O7112.4 (2)C10—C9—C8123.7 (4)
O6—Cl1—O7112.7 (2)C11—C10—C9119.8 (4)
O8—Cl1—O5106.4 (3)C11—C10—H11A120.1
O6—Cl1—O5105.9 (3)C9—C10—H11A120.1
O7—Cl1—O5105.9 (3)C10—C11—C12120.3 (5)
O2—Cl2—O4115.1 (3)C10—C11—H12A119.9
O2—Cl2—O3114.1 (3)C12—C11—H12A119.9
O4—Cl2—O3111.1 (3)C13—C12—C11120.5 (5)
O2—Cl2—O1107.5 (3)C13—C12—H13A119.7
O4—Cl2—O1107.3 (4)C11—C12—H13A119.7
O3—Cl2—O1100.4 (3)C12—C13—C14119.7 (4)
C2—C1—N1110.6 (4)C12—C13—H14A120.2
C2—C1—H1A109.5C14—C13—H14A120.2
N1—C1—H1A109.5C13—C14—C9121.1 (4)
C2—C1—H1B109.5C13—C14—N4120.5 (4)
N1—C1—H1B109.5C9—C14—N4118.4 (4)
H1A—C1—H1B108.1N3—C15—N4125.5 (4)
O9—C2—C1110.7 (5)N3—C15—N5115.8 (4)
O9—C2—H2A109.5N4—C15—N5118.7 (4)
C1—C2—H2A109.5N6—C16—C17122.1 (4)
O9—C2—H2B109.5N6—C16—H17A119.0
C1—C2—H2B109.5C17—C16—H17A119.0
H2A—C2—H2B108.1C22—C17—C18119.1 (4)
C3—O9—C2111.0 (4)C22—C17—C16119.4 (4)
O9—C3—C4111.9 (5)C18—C17—C16121.5 (4)
O9—C3—H4A109.2C19—C18—C17120.3 (4)
C4—C3—H4A109.2C19—C18—H19A119.8
O9—C3—H4B109.2C17—C18—H19A119.8
C4—C3—H4B109.2C20—C19—C18118.7 (4)
H4A—C3—H4B107.9C20—C19—H20A120.6
N1—C4—C3110.2 (4)C18—C19—H20A120.6
N1—C4—H5A109.6C21—C20—C19121.4 (4)
C3—C4—H5A109.6C21—C20—Cl3120.0 (4)
N1—C4—H5B109.6C19—C20—Cl3118.6 (4)
C3—C4—H5B109.6C20—C21—C22119.2 (4)
H5A—C4—H5B108.1C20—C21—H22A120.4
N1—C5—C6114.8 (4)C22—C21—H22A120.4
N1—C5—H6A108.6C17—C22—C21121.3 (5)
C6—C5—H6A108.6C17—C22—H23A119.3
N1—C5—H6B108.6C21—C22—H23A119.3
C6—C5—H6B108.6C4—N1—C1108.6 (4)
H6A—C5—H6B107.5C4—N1—C5113.9 (4)
C5—C6—C7114.1 (4)C1—N1—C5109.0 (4)
C5—C6—H7A108.7C4—N1—H1C108.4
C7—C6—H7A108.7C1—N1—H1C108.4
C5—C6—H7B108.7C5—N1—H1C108.4
C7—C6—H7B108.7C8—N2—C7124.8 (4)
H7A—C6—H7B107.6C8—N2—H2C117.6
N2—C7—C6112.2 (4)C7—N2—H2C117.6
N2—C7—H8A109.2C15—N3—C8117.4 (4)
C6—C7—H8A109.2C15—N4—C14119.8 (4)
N2—C7—H8B109.2C15—N4—H4C120.1
C6—C7—H8B109.2C14—N4—H4C120.1
H8A—C7—H8B107.9C15—N5—N6118.9 (4)
N2—C8—N3117.0 (4)C15—N5—H5C120.6
N2—C8—C9121.8 (4)N6—N5—H5C120.6
N3—C8—C9121.1 (4)C16—N6—N5116.1 (4)
C14—C9—C10118.7 (4)
N1—C1—C2—O958.6 (7)C18—C19—C20—Cl3179.7 (4)
C1—C2—O9—C3−59.2 (7)C19—C20—C21—C22−0.4 (7)
C2—O9—C3—C458.6 (7)Cl3—C20—C21—C22−179.2 (4)
O9—C3—C4—N1−57.0 (6)C18—C17—C22—C21−0.9 (7)
N1—C5—C6—C761.1 (6)C16—C17—C22—C21179.0 (4)
C5—C6—C7—N2173.8 (4)C20—C21—C22—C170.4 (7)
N2—C8—C9—C14178.4 (4)C3—C4—N1—C154.8 (6)
N3—C8—C9—C142.2 (6)C3—C4—N1—C5176.4 (4)
N2—C8—C9—C101.8 (7)C2—C1—N1—C4−56.3 (6)
N3—C8—C9—C10−174.4 (4)C2—C1—N1—C5179.1 (5)
C14—C9—C10—C11−1.2 (7)C6—C5—N1—C455.1 (6)
C8—C9—C10—C11175.4 (4)C6—C5—N1—C1176.5 (4)
C9—C10—C11—C121.0 (7)N3—C8—N2—C76.0 (7)
C10—C11—C12—C130.1 (7)C9—C8—N2—C7−170.4 (4)
C11—C12—C13—C14−1.0 (7)C6—C7—N2—C8−87.4 (6)
C12—C13—C14—C90.8 (7)N4—C15—N3—C8−1.4 (7)
C12—C13—C14—N4−177.7 (4)N5—C15—N3—C8178.2 (4)
C10—C9—C14—C130.3 (6)N2—C8—N3—C15−179.0 (4)
C8—C9—C14—C13−176.5 (4)C9—C8—N3—C15−2.6 (6)
C10—C9—C14—N4178.8 (4)N3—C15—N4—C145.7 (7)
C8—C9—C14—N42.0 (6)N5—C15—N4—C14−173.9 (4)
N6—C16—C17—C22−176.6 (4)C13—C14—N4—C15172.7 (4)
N6—C16—C17—C183.3 (7)C9—C14—N4—C15−5.8 (6)
C22—C17—C18—C191.4 (7)N3—C15—N5—N6−173.4 (4)
C16—C17—C18—C19−178.5 (4)N4—C15—N5—N66.3 (6)
C17—C18—C19—C20−1.3 (7)C17—C16—N6—N5−179.6 (4)
C18—C19—C20—C210.8 (7)C15—N5—N6—C16179.4 (4)
D—H···AD—HH···AD···AD—H···A
N1—H1C···O30.911.822.717 (6)168
N2—H2C···O6i0.862.042.888 (5)167
N4—H4C···O7ii0.862.052.859 (5)156
N5—H5C···O9iii0.862.112.915 (5)157
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1C⋯O30.911.822.717 (6)168
N2—H2C⋯O6i0.862.042.888 (5)167
N4—H4C⋯O7ii0.862.052.859 (5)156
N5—H5C⋯O9iii0.862.112.915 (5)157

Symmetry codes: (i) ; (ii) ; (iii) .

  4 in total

1.  Synthesis and evaluation of graveoline and graveolinine derivatives with potent anti-angiogenesis activities.

Authors:  Zeng-Yun An; Yi-Yong Yan; Dan Peng; Tian-Miao Ou; Jia-Heng Tan; Shi-Liang Huang; Lin-Kun An; Lian-Quan Gu; Zhi-Shu Huang
Journal:  Eur J Med Chem       Date:  2010-05-26       Impact factor: 6.514

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

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Authors:  Khaled Abouzid; Samia Shouman
Journal:  Bioorg Med Chem       Date:  2008-07-20       Impact factor: 3.641

4.  Synthesis and in vitro cytotoxicity evaluation of 4-aminoquinoline derivatives.

Authors:  Haiwen Zhang; V Raja Solomon; Changkun Hu; Gerardo Ulibarri; Hoyun Lee
Journal:  Biomed Pharmacother       Date:  2007-05-24       Impact factor: 6.529

  4 in total

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