Literature DB >> 22719553

5-Meth-oxy-2-[(5-meth-oxy-1H-indol-1-yl)carbon-yl]-1H-indole.

Mohamed I Attia, Nasser R El-Brollosy, Ali A El-Emam, Seik Weng Ng, Edward R T Tiekink.   

Abstract

The asymmetric unit of the title compound, C(19)H(16)N(2)O(3), comprises three independent mol-ecules (A, B and C). The inversion-related molecule of A is virtually superimposable upon the other two molecules. In each mol-ecule, there is a twist in the link between the approximately syn n class="Chemical">carbonyl and amine groups [the N-C-C-O torsion angles range from 19.73 (19) to -21.2 (2)°]. Each mol-ecule has a bent shape quanti-fied in terms of the dihedral angle between the indole and indole fused-ring systems [range = 45.69 (5)-47.91 (5)°]. In the crystal, the A and B mol-ecules form dimeric aggregates via ten-membered {⋯HNC(2)O}(2) synthons, while the C mol-ecules self-associate similarly but about a centre of inversion.

Entities:  

Year:  2012        PMID: 22719553      PMCID: PMC3379355          DOI: 10.1107/S1600536812020399

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to melatonin and melatonin preparations, see: Barrenetxe et al. (2004 ▶); Williamson et al. (1998 ▶). For background to melatonin receptor ligands, see: Bedini et al. (2006 ▶); Attia et al. (2008 ▶). For a related structure, see: Attia et al. (2012 ▶).

Experimental

Crystal data

C19H16N2O3 M = 320.34 Triclinic, a = 11.3153 (4) Å b = 12.1183 (5) Å c = 17.1300 (6) Å α = 76.251 (3)° β = 79.747 (3)° γ = 88.913 (3)° V = 2244.50 (15) Å3 Z = 6 Cu Kα radiation μ = 0.80 mm−1 T = 100 K 0.30 × 0.20 × 0.02 mm

Data collection

Agilent SuperNova Dual diffractometer with an Atlas detector Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011 ▶) T min = 0.367, T max = 1.000 17372 measured reflections 9182 independent reflections 7534 reflections with I > 2σ(I) R int = 0.029

Refinement

R[F 2 > 2σ(F 2)] = 0.043 wR(F 2) = 0.121 S = 1.02 9182 reflections 661 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.28 e Å−3 Δρmin = −0.30 e Å−3 Data collection: CrysAlis PRO (Agilent, 2011 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶), Qmol (Gans & Shalloway, 2001 ▶) and DIAMOND (Brandenburg, 2006 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812020399/su2424sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812020399/su2424Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812020399/su2424Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C19H16N2O3Z = 6
Mr = 320.34F(000) = 1008
Triclinic, P1Dx = 1.422 Mg m3
Hall symbol: -P 1Cu Kα radiation, λ = 1.54184 Å
a = 11.3153 (4) ÅCell parameters from 7164 reflections
b = 12.1183 (5) Åθ = 2.7–76.2°
c = 17.1300 (6) ŵ = 0.80 mm1
α = 76.251 (3)°T = 100 K
β = 79.747 (3)°Plate, colourless
γ = 88.913 (3)°0.30 × 0.20 × 0.02 mm
V = 2244.50 (15) Å3
Agilent SuperNova Dual diffractometer with an Atlas detector9182 independent reflections
Radiation source: SuperNova (Mo) X-ray Source7534 reflections with I > 2σ(I)
Mirror monochromatorRint = 0.029
Detector resolution: 10.4041 pixels mm-1θmax = 76.4°, θmin = 2.7°
ω scanh = −14→13
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011)k = −10→15
Tmin = 0.367, Tmax = 1.000l = −21→21
17372 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.043Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.121H atoms treated by a mixture of independent and constrained refinement
S = 1.02w = 1/[σ2(Fo2) + (0.0672P)2 + 0.3331P] where P = (Fo2 + 2Fc2)/3
9182 reflections(Δ/σ)max < 0.001
661 parametersΔρmax = 0.28 e Å3
0 restraintsΔρmin = −0.30 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.87563 (11)0.89787 (9)0.11597 (6)0.0252 (2)
O20.71161 (10)0.56194 (8)0.59096 (7)0.0228 (2)
O30.72114 (11)0.68238 (10)0.93945 (7)0.0270 (2)
O40.45990 (10)0.07927 (9)0.91666 (6)0.0247 (2)
O50.59785 (10)0.42667 (8)0.44330 (6)0.0220 (2)
O60.62516 (11)0.29566 (9)0.09143 (6)0.0261 (2)
O70.92792 (11)0.40367 (9)0.10246 (7)0.0279 (2)
O80.91510 (10)0.07096 (8)0.57278 (7)0.0252 (2)
O90.81693 (11)0.19031 (9)0.92812 (7)0.0278 (2)
N10.71116 (11)0.64193 (10)0.42505 (8)0.0187 (2)
N20.71456 (10)0.74048 (9)0.61092 (7)0.0173 (2)
N30.60355 (11)0.34591 (10)0.60844 (7)0.0178 (2)
N40.60440 (10)0.24863 (9)0.42172 (7)0.0165 (2)
N50.97901 (11)0.14977 (10)0.40478 (8)0.0210 (2)
N60.91034 (11)0.24988 (9)0.59292 (8)0.0192 (2)
C10.92781 (15)1.00741 (13)0.10623 (9)0.0258 (3)
H1A0.95281.04250.04790.039*
H1B0.99791.00000.13330.039*
H1C0.86861.05510.13080.039*
C20.74608 (12)0.69609 (11)0.34483 (9)0.0178 (3)
C30.73470 (13)0.66026 (12)0.27422 (9)0.0206 (3)
H3A0.69740.58940.27740.025*
C40.78003 (13)0.73241 (12)0.20039 (9)0.0214 (3)
H40.77350.71080.15150.026*
C50.83610 (13)0.83791 (12)0.19513 (9)0.0208 (3)
C60.84677 (12)0.87432 (11)0.26392 (9)0.0183 (3)
H60.88380.94560.25990.022*
C70.80051 (12)0.80150 (11)0.34081 (9)0.0174 (3)
C80.79569 (12)0.80978 (11)0.42263 (9)0.0176 (3)
H80.82520.87140.43970.021*
C90.73965 (12)0.71070 (11)0.47286 (9)0.0174 (3)
C100.72046 (12)0.66481 (11)0.56109 (9)0.0175 (3)
C110.67545 (12)0.85333 (11)0.59257 (9)0.0187 (3)
H110.66280.89470.54030.022*
C120.65860 (13)0.89380 (11)0.66068 (9)0.0193 (3)
H120.63270.96770.66440.023*
C130.68686 (12)0.80492 (11)0.72678 (9)0.0180 (3)
C140.72090 (12)0.71065 (11)0.69460 (9)0.0171 (3)
C150.75692 (12)0.61024 (11)0.74267 (9)0.0194 (3)
H150.78170.54720.72030.023*
C160.75493 (13)0.60653 (12)0.82426 (9)0.0213 (3)
H160.77890.53940.85860.026*
C170.71818 (13)0.69985 (13)0.85763 (9)0.0210 (3)
C180.68459 (13)0.79993 (12)0.80932 (9)0.0204 (3)
H180.66070.86320.83160.024*
C190.68398 (19)0.77366 (16)0.97647 (11)0.0368 (4)
H19A0.69010.75171.03450.055*
H19B0.60050.79150.97110.055*
H19C0.73570.84070.94930.055*
C200.39862 (14)−0.02612 (13)0.92700 (9)0.0248 (3)
H20A0.3792−0.06340.98530.037*
H20B0.4501−0.07510.89820.037*
H20C0.3243−0.01240.90470.037*
C210.57271 (12)0.29019 (11)0.68871 (9)0.0172 (3)
C220.58362 (13)0.32549 (11)0.75945 (9)0.0189 (3)
H220.61690.39810.75640.023*
C230.54416 (13)0.25078 (12)0.83326 (9)0.0204 (3)
H230.55080.27210.88220.024*
C240.49362 (13)0.14248 (12)0.83807 (9)0.0187 (3)
C250.48224 (12)0.10716 (11)0.76895 (8)0.0175 (3)
H250.44800.03470.77260.021*
C260.52316 (12)0.18238 (11)0.69255 (8)0.0166 (3)
C270.52691 (12)0.17516 (11)0.61035 (8)0.0169 (3)
H270.49990.11270.59300.020*
C280.57739 (12)0.27657 (11)0.56054 (8)0.0166 (3)
C290.59421 (12)0.32370 (11)0.47242 (8)0.0172 (3)
C300.64991 (13)0.13806 (11)0.43902 (9)0.0191 (3)
H300.66160.09640.49140.023*
C310.67440 (12)0.10014 (11)0.36993 (9)0.0191 (3)
H310.70520.02790.36560.023*
C320.64556 (12)0.18867 (11)0.30381 (9)0.0176 (3)
C330.60260 (12)0.28048 (11)0.33724 (8)0.0163 (3)
C340.56364 (12)0.37893 (11)0.28954 (9)0.0179 (3)
H340.53320.43980.31270.022*
C350.57070 (12)0.38537 (12)0.20640 (9)0.0193 (3)
H350.54480.45170.17230.023*
C360.61554 (13)0.29522 (12)0.17255 (9)0.0201 (3)
C370.65297 (12)0.19634 (12)0.22104 (9)0.0197 (3)
H370.68300.13530.19790.024*
C380.58807 (15)0.39437 (14)0.03902 (9)0.0278 (3)
H38A0.59940.3840−0.01680.042*
H38B0.63620.46030.04000.042*
H38C0.50300.40700.05780.042*
C390.87551 (14)0.51225 (13)0.09507 (10)0.0265 (3)
H39A0.87350.54660.03740.040*
H39B0.92340.56110.11630.040*
H39C0.79350.50400.12640.040*
C400.97262 (12)0.20264 (12)0.32586 (9)0.0204 (3)
C411.00957 (13)0.16588 (12)0.25382 (10)0.0226 (3)
H411.04550.09420.25480.027*
C420.99184 (13)0.23744 (12)0.18191 (10)0.0240 (3)
H421.01650.21490.13210.029*
C430.93764 (13)0.34427 (12)0.18016 (10)0.0227 (3)
C440.90086 (12)0.38164 (12)0.25020 (9)0.0205 (3)
H440.86480.45340.24840.025*
C450.91865 (12)0.30930 (11)0.32534 (9)0.0192 (3)
C460.89379 (12)0.31841 (12)0.40774 (9)0.0203 (3)
H460.85770.38070.42690.024*
C470.93202 (12)0.21964 (12)0.45500 (9)0.0200 (3)
C480.91909 (12)0.17394 (12)0.54301 (9)0.0202 (3)
C490.96108 (13)0.36113 (11)0.57014 (10)0.0216 (3)
H490.98990.40220.51560.026*
C500.96235 (13)0.40024 (11)0.63750 (9)0.0213 (3)
H500.99160.47280.63840.026*
C510.91153 (12)0.31241 (11)0.70786 (9)0.0196 (3)
C520.87999 (12)0.22017 (11)0.67885 (9)0.0189 (3)
C530.82490 (12)0.12172 (12)0.73196 (10)0.0214 (3)
H530.80140.06020.71210.026*
C540.80601 (13)0.11751 (12)0.81456 (10)0.0227 (3)
H540.76830.05170.85210.027*
C550.84108 (13)0.20794 (12)0.84477 (9)0.0223 (3)
C560.89355 (13)0.30686 (12)0.79158 (9)0.0212 (3)
H560.91640.36860.81150.025*
C570.86969 (15)0.26861 (13)0.96288 (10)0.0278 (3)
H57A0.84590.24711.02250.042*
H57B0.84210.34530.94190.042*
H57C0.95740.26730.94820.042*
H1n0.671 (2)0.5735 (19)0.4445 (14)0.038 (6)*
H3n0.6380 (19)0.4170 (18)0.5893 (13)0.028 (5)*
H5n1.0089 (19)0.0807 (18)0.4222 (13)0.027 (5)*
U11U22U33U12U13U23
O10.0359 (6)0.0214 (5)0.0176 (5)0.0048 (4)−0.0031 (4)−0.0048 (4)
O20.0308 (5)0.0136 (5)0.0236 (5)0.0013 (4)−0.0054 (4)−0.0034 (4)
O30.0347 (6)0.0282 (5)0.0183 (5)0.0064 (4)−0.0064 (4)−0.0054 (4)
O40.0347 (6)0.0228 (5)0.0152 (5)−0.0044 (4)−0.0024 (4)−0.0032 (4)
O50.0316 (5)0.0128 (4)0.0210 (5)0.0020 (4)−0.0047 (4)−0.0032 (4)
O60.0355 (6)0.0267 (5)0.0155 (5)0.0019 (4)−0.0026 (4)−0.0053 (4)
O70.0359 (6)0.0227 (5)0.0237 (6)0.0047 (4)−0.0032 (4)−0.0044 (4)
O80.0305 (5)0.0130 (5)0.0295 (6)0.0030 (4)−0.0019 (4)−0.0028 (4)
O90.0310 (6)0.0265 (5)0.0225 (5)−0.0047 (4)−0.0003 (4)−0.0020 (4)
N10.0203 (5)0.0151 (5)0.0213 (6)0.0019 (4)−0.0028 (4)−0.0063 (4)
N20.0203 (5)0.0134 (5)0.0172 (6)0.0025 (4)−0.0018 (4)−0.0032 (4)
N30.0220 (6)0.0138 (5)0.0175 (6)0.0008 (4)−0.0028 (4)−0.0039 (4)
N40.0187 (5)0.0137 (5)0.0163 (6)0.0026 (4)−0.0022 (4)−0.0029 (4)
N50.0212 (6)0.0149 (5)0.0268 (6)0.0047 (4)−0.0042 (5)−0.0054 (5)
N60.0198 (6)0.0122 (5)0.0241 (6)0.0012 (4)−0.0031 (5)−0.0023 (4)
C10.0313 (8)0.0222 (7)0.0214 (7)0.0047 (6)−0.0006 (6)−0.0034 (6)
C20.0183 (6)0.0150 (6)0.0211 (7)0.0045 (5)−0.0036 (5)−0.0064 (5)
C30.0214 (6)0.0177 (6)0.0250 (7)0.0048 (5)−0.0059 (5)−0.0087 (5)
C40.0244 (7)0.0213 (7)0.0220 (7)0.0070 (5)−0.0070 (5)−0.0102 (5)
C50.0230 (7)0.0199 (6)0.0192 (7)0.0087 (5)−0.0044 (5)−0.0043 (5)
C60.0188 (6)0.0165 (6)0.0196 (7)0.0039 (5)−0.0026 (5)−0.0051 (5)
C70.0162 (6)0.0163 (6)0.0203 (7)0.0036 (5)−0.0030 (5)−0.0058 (5)
C80.0169 (6)0.0159 (6)0.0197 (7)0.0037 (5)−0.0013 (5)−0.0052 (5)
C90.0171 (6)0.0157 (6)0.0200 (7)0.0030 (5)−0.0016 (5)−0.0067 (5)
C100.0167 (6)0.0147 (6)0.0209 (7)0.0023 (5)−0.0028 (5)−0.0045 (5)
C110.0205 (6)0.0136 (6)0.0203 (7)0.0033 (5)−0.0021 (5)−0.0023 (5)
C120.0208 (6)0.0143 (6)0.0216 (7)0.0021 (5)−0.0019 (5)−0.0036 (5)
C130.0161 (6)0.0155 (6)0.0213 (7)0.0008 (5)−0.0015 (5)−0.0039 (5)
C140.0159 (6)0.0161 (6)0.0188 (6)0.0004 (5)−0.0022 (5)−0.0041 (5)
C150.0193 (6)0.0152 (6)0.0227 (7)0.0018 (5)−0.0027 (5)−0.0034 (5)
C160.0208 (6)0.0184 (6)0.0227 (7)0.0030 (5)−0.0040 (5)−0.0011 (5)
C170.0196 (6)0.0241 (7)0.0188 (7)0.0004 (5)−0.0031 (5)−0.0044 (5)
C180.0206 (6)0.0189 (6)0.0219 (7)0.0019 (5)−0.0027 (5)−0.0063 (5)
C190.0534 (11)0.0373 (9)0.0236 (8)0.0136 (8)−0.0114 (7)−0.0125 (7)
C200.0283 (7)0.0227 (7)0.0206 (7)−0.0027 (6)−0.0016 (6)−0.0019 (5)
C210.0170 (6)0.0153 (6)0.0193 (7)0.0034 (5)−0.0024 (5)−0.0051 (5)
C220.0211 (6)0.0158 (6)0.0212 (7)0.0015 (5)−0.0042 (5)−0.0067 (5)
C230.0236 (7)0.0205 (7)0.0190 (7)0.0018 (5)−0.0044 (5)−0.0081 (5)
C240.0201 (6)0.0191 (6)0.0160 (6)0.0021 (5)−0.0020 (5)−0.0036 (5)
C250.0183 (6)0.0162 (6)0.0177 (6)0.0016 (5)−0.0025 (5)−0.0041 (5)
C260.0158 (6)0.0152 (6)0.0189 (7)0.0026 (5)−0.0031 (5)−0.0045 (5)
C270.0183 (6)0.0140 (6)0.0186 (6)0.0014 (5)−0.0030 (5)−0.0043 (5)
C280.0185 (6)0.0143 (6)0.0174 (6)0.0031 (5)−0.0034 (5)−0.0049 (5)
C290.0177 (6)0.0148 (6)0.0189 (7)0.0024 (5)−0.0032 (5)−0.0039 (5)
C300.0227 (6)0.0126 (6)0.0206 (7)0.0022 (5)−0.0031 (5)−0.0023 (5)
C310.0201 (6)0.0143 (6)0.0220 (7)0.0025 (5)−0.0018 (5)−0.0044 (5)
C320.0166 (6)0.0150 (6)0.0202 (7)−0.0001 (5)−0.0005 (5)−0.0041 (5)
C330.0154 (6)0.0149 (6)0.0178 (6)−0.0006 (5)−0.0004 (5)−0.0040 (5)
C340.0180 (6)0.0159 (6)0.0187 (6)0.0017 (5)−0.0015 (5)−0.0031 (5)
C350.0189 (6)0.0185 (6)0.0187 (7)0.0005 (5)−0.0029 (5)−0.0014 (5)
C360.0197 (6)0.0228 (7)0.0168 (6)−0.0028 (5)−0.0005 (5)−0.0048 (5)
C370.0189 (6)0.0185 (6)0.0214 (7)0.0003 (5)0.0008 (5)−0.0072 (5)
C380.0344 (8)0.0289 (8)0.0187 (7)−0.0026 (6)−0.0061 (6)−0.0016 (6)
C390.0283 (7)0.0213 (7)0.0274 (8)0.0012 (6)−0.0039 (6)−0.0021 (6)
C400.0173 (6)0.0159 (6)0.0270 (7)0.0009 (5)−0.0031 (5)−0.0039 (5)
C410.0210 (6)0.0167 (6)0.0298 (8)0.0027 (5)−0.0015 (6)−0.0075 (6)
C420.0227 (7)0.0210 (7)0.0278 (8)−0.0001 (5)0.0000 (6)−0.0086 (6)
C430.0221 (7)0.0194 (7)0.0249 (7)−0.0011 (5)−0.0022 (5)−0.0034 (6)
C440.0182 (6)0.0160 (6)0.0263 (7)0.0016 (5)−0.0040 (5)−0.0034 (5)
C450.0164 (6)0.0161 (6)0.0247 (7)0.0010 (5)−0.0023 (5)−0.0046 (5)
C460.0180 (6)0.0146 (6)0.0282 (7)0.0017 (5)−0.0037 (5)−0.0055 (5)
C470.0183 (6)0.0157 (6)0.0263 (7)0.0015 (5)−0.0032 (5)−0.0065 (5)
C480.0173 (6)0.0150 (6)0.0276 (7)0.0030 (5)−0.0031 (5)−0.0046 (5)
C490.0221 (7)0.0136 (6)0.0264 (7)−0.0003 (5)−0.0007 (5)−0.0021 (5)
C500.0214 (6)0.0137 (6)0.0266 (7)0.0002 (5)−0.0015 (5)−0.0025 (5)
C510.0163 (6)0.0152 (6)0.0260 (7)0.0019 (5)−0.0030 (5)−0.0031 (5)
C520.0167 (6)0.0144 (6)0.0244 (7)0.0036 (5)−0.0030 (5)−0.0029 (5)
C530.0173 (6)0.0154 (6)0.0302 (8)0.0017 (5)−0.0030 (5)−0.0035 (5)
C540.0188 (6)0.0174 (6)0.0283 (8)−0.0008 (5)−0.0013 (5)0.0000 (5)
C550.0192 (6)0.0208 (7)0.0240 (7)0.0024 (5)−0.0004 (5)−0.0022 (6)
C560.0198 (6)0.0169 (6)0.0251 (7)0.0010 (5)−0.0018 (5)−0.0029 (5)
C570.0346 (8)0.0212 (7)0.0261 (8)0.0014 (6)−0.0020 (6)−0.0050 (6)
O1—C51.3765 (18)C20—H20A0.9800
O1—C11.4240 (19)C20—H20B0.9800
O2—C101.2285 (17)C20—H20C0.9800
O3—C171.3732 (18)C21—C221.403 (2)
O3—C191.422 (2)C21—C261.4140 (19)
O4—C241.3721 (17)C22—C231.374 (2)
O4—C201.4232 (18)C22—H220.9500
O5—C291.2273 (17)C23—C241.420 (2)
O6—C361.3732 (18)C23—H230.9500
O6—C381.4204 (19)C24—C251.378 (2)
O7—C431.3768 (19)C25—C261.4111 (19)
O7—C391.4202 (18)C25—H250.9500
O8—C481.2292 (18)C26—C271.4245 (19)
O9—C551.3703 (19)C27—C281.3854 (19)
O9—C571.424 (2)C27—H270.9500
N1—C21.3649 (19)C28—C291.4604 (19)
N1—C91.3775 (18)C30—C311.351 (2)
N1—H1n0.91 (2)C30—H300.9500
N2—C101.3868 (18)C31—C321.4426 (19)
N2—C141.4070 (18)C31—H310.9500
N2—C111.4097 (17)C32—C371.386 (2)
N3—C211.3658 (18)C32—C331.4091 (18)
N3—C281.3751 (18)C33—C341.3894 (19)
N3—H3n0.91 (2)C34—C351.396 (2)
N4—C291.3897 (18)C34—H340.9500
N4—C301.4099 (16)C35—C361.401 (2)
N4—C331.4099 (18)C35—H350.9500
N5—C401.366 (2)C36—C371.392 (2)
N5—C471.3805 (18)C37—H370.9500
N5—H5n0.90 (2)C38—H38A0.9800
N6—C481.3886 (19)C38—H38B0.9800
N6—C521.4096 (19)C38—H38C0.9800
N6—C491.4139 (18)C39—H39A0.9800
C1—H1A0.9800C39—H39B0.9800
C1—H1B0.9800C39—H39C0.9800
C1—H1C0.9800C40—C411.402 (2)
C2—C31.405 (2)C40—C451.4177 (18)
C2—C71.4103 (19)C41—C421.372 (2)
C3—C41.374 (2)C41—H410.9500
C3—H3A0.9500C42—C431.418 (2)
C4—C51.415 (2)C42—H420.9500
C4—H40.9500C43—C441.375 (2)
C5—C61.378 (2)C44—C451.420 (2)
C6—C71.4167 (19)C44—H440.9500
C6—H60.9500C45—C461.420 (2)
C7—C81.4202 (19)C46—C471.3855 (19)
C8—C91.3884 (19)C46—H460.9500
C8—H80.9500C47—C481.459 (2)
C9—C101.4591 (19)C49—C501.350 (2)
C11—C121.352 (2)C49—H490.9500
C11—H110.9500C50—C511.4432 (19)
C12—C131.4424 (19)C50—H500.9500
C12—H120.9500C51—C561.398 (2)
C13—C181.396 (2)C51—C521.402 (2)
C13—C141.4016 (18)C52—C531.3965 (19)
C14—C151.3961 (19)C53—C541.382 (2)
C15—C161.384 (2)C53—H530.9500
C15—H150.9500C54—C551.409 (2)
C16—C171.408 (2)C54—H540.9500
C16—H160.9500C55—C561.391 (2)
C17—C181.385 (2)C56—H560.9500
C18—H180.9500C57—H57A0.9800
C19—H19A0.9800C57—H57B0.9800
C19—H19B0.9800C57—H57C0.9800
C19—H19C0.9800
C5—O1—C1116.08 (12)C26—C25—H25121.2
C17—O3—C19116.73 (12)C25—C26—C21120.11 (13)
C24—O4—C20116.84 (12)C25—C26—C27133.31 (13)
C36—O6—C38117.51 (12)C21—C26—C27106.58 (12)
C43—O7—C39116.59 (12)C28—C27—C26106.95 (12)
C55—O9—C57117.19 (12)C28—C27—H27126.5
C2—N1—C9108.82 (12)C26—C27—H27126.5
C2—N1—H1n126.2 (14)N3—C28—C27109.16 (12)
C9—N1—H1n124.9 (14)N3—C28—C29117.84 (12)
C10—N2—C14125.10 (11)C27—C28—C29132.63 (13)
C10—N2—C11126.08 (12)O5—C29—N4120.34 (13)
C14—N2—C11107.48 (11)O5—C29—C28121.45 (12)
C21—N3—C28109.04 (12)N4—C29—C28118.21 (11)
C21—N3—H3n125.8 (13)C31—C30—N4109.85 (12)
C28—N3—H3n125.2 (13)C31—C30—H30125.1
C29—N4—C30125.87 (12)N4—C30—H30125.1
C29—N4—C33124.54 (11)C30—C31—C32107.94 (12)
C30—N4—C33107.51 (11)C30—C31—H31126.0
C40—N5—C47109.01 (12)C32—C31—H31126.0
C40—N5—H5n126.4 (13)C37—C32—C33120.10 (13)
C47—N5—H5n124.6 (13)C37—C32—C31132.79 (13)
C48—N6—C52125.13 (12)C33—C32—C31107.11 (12)
C48—N6—C49125.52 (13)C34—C33—C32121.58 (13)
C52—N6—C49107.23 (12)C34—C33—N4130.78 (12)
O1—C1—H1A109.5C32—C33—N4107.59 (11)
O1—C1—H1B109.5C33—C34—C35117.79 (12)
H1A—C1—H1B109.5C33—C34—H34121.1
O1—C1—H1C109.5C35—C34—H34121.1
H1A—C1—H1C109.5C34—C35—C36120.85 (13)
H1B—C1—H1C109.5C34—C35—H35119.6
N1—C2—C3129.53 (13)C36—C35—H35119.6
N1—C2—C7108.48 (12)O6—C36—C37115.04 (12)
C3—C2—C7121.99 (13)O6—C36—C35124.02 (13)
C4—C3—C2116.96 (13)C37—C36—C35120.94 (13)
C4—C3—H3A121.5C32—C37—C36118.72 (13)
C2—C3—H3A121.5C32—C37—H37120.6
C3—C4—C5121.87 (14)C36—C37—H37120.6
C3—C4—H4119.1O6—C38—H38A109.5
C5—C4—H4119.1O6—C38—H38B109.5
O1—C5—C6125.16 (14)H38A—C38—H38B109.5
O1—C5—C4113.18 (13)O6—C38—H38C109.5
C6—C5—C4121.65 (14)H38A—C38—H38C109.5
C5—C6—C7117.55 (13)H38B—C38—H38C109.5
C5—C6—H6121.2O7—C39—H39A109.5
C7—C6—H6121.2O7—C39—H39B109.5
C2—C7—C6119.98 (13)H39A—C39—H39B109.5
C2—C7—C8106.72 (12)O7—C39—H39C109.5
C6—C7—C8133.31 (13)H39A—C39—H39C109.5
C9—C8—C7106.92 (12)H39B—C39—H39C109.5
C9—C8—H8126.5N5—C40—C41129.92 (13)
C7—C8—H8126.5N5—C40—C45108.22 (13)
N1—C9—C8109.05 (12)C41—C40—C45121.86 (14)
N1—C9—C10118.01 (12)C42—C41—C40117.44 (13)
C8—C9—C10132.49 (13)C42—C41—H41121.3
O2—C10—N2120.42 (13)C40—C41—H41121.3
O2—C10—C9121.34 (13)C41—C42—C43121.54 (14)
N2—C10—C9118.24 (12)C41—C42—H42119.2
C12—C11—N2109.64 (12)C43—C42—H42119.2
C12—C11—H11125.2C44—C43—O7125.32 (13)
N2—C11—H11125.2C44—C43—C42121.79 (14)
C11—C12—C13107.93 (12)O7—C43—C42112.89 (14)
C11—C12—H12126.0C43—C44—C45117.73 (13)
C13—C12—H12126.0C43—C44—H44121.1
C18—C13—C14120.62 (13)C45—C44—H44121.1
C18—C13—C12132.28 (13)C40—C45—C46106.58 (13)
C14—C13—C12107.10 (12)C40—C45—C44119.64 (14)
C15—C14—C13121.68 (13)C46—C45—C44133.78 (13)
C15—C14—N2130.44 (13)C47—C46—C45107.27 (12)
C13—C14—N2107.85 (11)C47—C46—H46126.4
C16—C15—C14117.16 (13)C45—C46—H46126.4
C16—C15—H15121.4N5—C47—C46108.92 (13)
C14—C15—H15121.4N5—C47—C48117.63 (12)
C15—C16—C17121.60 (13)C46—C47—C48132.99 (13)
C15—C16—H16119.2O8—C48—N6120.42 (14)
C17—C16—H16119.2O8—C48—C47121.27 (14)
O3—C17—C18124.65 (13)N6—C48—C47118.31 (12)
O3—C17—C16114.37 (13)C50—C49—N6109.76 (13)
C18—C17—C16120.98 (14)C50—C49—H49125.1
C17—C18—C13117.94 (13)N6—C49—H49125.1
C17—C18—H18121.0C49—C50—C51107.98 (13)
C13—C18—H18121.0C49—C50—H50126.0
O3—C19—H19A109.5C51—C50—H50126.0
O3—C19—H19B109.5C56—C51—C52120.89 (13)
H19A—C19—H19B109.5C56—C51—C50131.99 (14)
O3—C19—H19C109.5C52—C51—C50107.11 (13)
H19A—C19—H19C109.5C53—C52—C51121.46 (14)
H19B—C19—H19C109.5C53—C52—N6130.59 (14)
O4—C20—H20A109.5C51—C52—N6107.92 (12)
O4—C20—H20B109.5C54—C53—C52117.24 (14)
H20A—C20—H20B109.5C54—C53—H53121.4
O4—C20—H20C109.5C52—C53—H53121.4
H20A—C20—H20C109.5C53—C54—C55121.91 (14)
H20B—C20—H20C109.5C53—C54—H54119.0
N3—C21—C22129.94 (13)C55—C54—H54119.0
N3—C21—C26108.27 (12)O9—C55—C56124.50 (14)
C22—C21—C26121.79 (13)O9—C55—C54114.82 (13)
C23—C22—C21117.27 (13)C56—C55—C54120.67 (14)
C23—C22—H22121.4C55—C56—C51117.77 (14)
C21—C22—H22121.4C55—C56—H56121.1
C22—C23—C24121.57 (13)C51—C56—H56121.1
C22—C23—H23119.2O9—C57—H57A109.5
C24—C23—H23119.2O9—C57—H57B109.5
O4—C24—C25124.97 (13)H57A—C57—H57B109.5
O4—C24—C23113.43 (12)O9—C57—H57C109.5
C25—C24—C23121.59 (13)H57A—C57—H57C109.5
C24—C25—C26117.66 (13)H57B—C57—H57C109.5
C24—C25—H25121.2
C9—N1—C2—C3−179.26 (13)C27—C28—C29—O5151.80 (15)
C9—N1—C2—C71.13 (15)N3—C28—C29—N4160.58 (12)
N1—C2—C3—C4−179.08 (13)C27—C28—C29—N4−27.3 (2)
C7—C2—C3—C40.5 (2)C29—N4—C30—C31−164.97 (13)
C2—C3—C4—C50.2 (2)C33—N4—C30—C31−0.85 (16)
C1—O1—C5—C6−2.1 (2)N4—C30—C31—C320.62 (16)
C1—O1—C5—C4177.08 (12)C30—C31—C32—C37179.82 (15)
C3—C4—C5—O1179.96 (12)C30—C31—C32—C33−0.15 (16)
C3—C4—C5—C6−0.8 (2)C37—C32—C33—C341.8 (2)
O1—C5—C6—C7179.79 (12)C31—C32—C33—C34−178.19 (13)
C4—C5—C6—C70.7 (2)C37—C32—C33—N4179.66 (12)
N1—C2—C7—C6179.02 (12)C31—C32—C33—N4−0.36 (15)
C3—C2—C7—C6−0.6 (2)C29—N4—C33—C34−17.3 (2)
N1—C2—C7—C8−0.76 (14)C30—N4—C33—C34178.28 (14)
C3—C2—C7—C8179.59 (12)C29—N4—C33—C32165.11 (12)
C5—C6—C7—C20.04 (19)C30—N4—C33—C320.73 (15)
C5—C6—C7—C8179.74 (14)C32—C33—C34—C35−1.3 (2)
C2—C7—C8—C90.11 (14)N4—C33—C34—C35−178.60 (13)
C6—C7—C8—C9−179.63 (14)C33—C34—C35—C360.1 (2)
C2—N1—C9—C8−1.07 (15)C38—O6—C36—C37179.90 (13)
C2—N1—C9—C10−174.29 (11)C38—O6—C36—C350.6 (2)
C7—C8—C9—N10.58 (15)C34—C35—C36—O6−179.95 (13)
C7—C8—C9—C10172.45 (13)C34—C35—C36—C370.7 (2)
C14—N2—C10—O212.4 (2)C33—C32—C37—C36−1.0 (2)
C11—N2—C10—O2−152.69 (14)C31—C32—C37—C36179.04 (15)
C14—N2—C10—C9−166.47 (12)O6—C36—C37—C32−179.63 (12)
C11—N2—C10—C928.5 (2)C35—C36—C37—C32−0.3 (2)
N1—C9—C10—O219.73 (19)C47—N5—C40—C41179.54 (15)
C8—C9—C10—O2−151.56 (15)C47—N5—C40—C45−0.65 (16)
N1—C9—C10—N2−161.42 (12)N5—C40—C41—C42179.94 (15)
C8—C9—C10—N227.3 (2)C45—C40—C41—C420.1 (2)
C10—N2—C11—C12167.69 (13)C40—C41—C42—C43−0.4 (2)
C14—N2—C11—C120.46 (16)C39—O7—C43—C440.0 (2)
N2—C11—C12—C13−0.26 (16)C39—O7—C43—C42−179.45 (13)
C11—C12—C13—C18−179.61 (15)C41—C42—C43—C440.4 (2)
C11—C12—C13—C14−0.03 (16)C41—C42—C43—O7179.88 (14)
C18—C13—C14—C15−1.9 (2)O7—C43—C44—C45−179.57 (13)
C12—C13—C14—C15178.45 (13)C42—C43—C44—C45−0.1 (2)
C18—C13—C14—N2179.95 (12)N5—C40—C45—C460.47 (16)
C12—C13—C14—N20.31 (15)C41—C40—C45—C46−179.70 (13)
C10—N2—C14—C1514.2 (2)N5—C40—C45—C44−179.74 (13)
C11—N2—C14—C15−178.39 (14)C41—C40—C45—C440.1 (2)
C10—N2—C14—C13−167.86 (13)C43—C44—C45—C40−0.1 (2)
C11—N2—C14—C13−0.47 (15)C43—C44—C45—C46179.62 (15)
C13—C14—C15—C161.5 (2)C40—C45—C46—C47−0.12 (16)
N2—C14—C15—C16179.18 (14)C44—C45—C46—C47−179.86 (15)
C14—C15—C16—C170.0 (2)C40—N5—C47—C460.58 (16)
C19—O3—C17—C181.6 (2)C40—N5—C47—C48173.82 (12)
C19—O3—C17—C16−179.52 (15)C45—C46—C47—N5−0.27 (16)
C15—C16—C17—O3179.88 (13)C45—C46—C47—C48−172.09 (15)
C15—C16—C17—C18−1.2 (2)C52—N6—C48—O8−9.4 (2)
O3—C17—C18—C13179.62 (13)C49—N6—C48—O8151.94 (14)
C16—C17—C18—C130.8 (2)C52—N6—C48—C47170.13 (13)
C14—C13—C18—C170.7 (2)C49—N6—C48—C47−28.6 (2)
C12—C13—C18—C17−179.75 (15)N5—C47—C48—O8−21.2 (2)
C28—N3—C21—C22179.21 (13)C46—C47—C48—O8150.07 (16)
C28—N3—C21—C26−1.06 (15)N5—C47—C48—N6159.32 (13)
N3—C21—C22—C23179.75 (13)C46—C47—C48—N6−29.4 (2)
C26—C21—C22—C230.1 (2)C48—N6—C49—C50−164.41 (13)
C21—C22—C23—C24−0.4 (2)C52—N6—C49—C50−0.33 (16)
C20—O4—C24—C25−6.1 (2)N6—C49—C50—C510.33 (16)
C20—O4—C24—C23174.51 (12)C49—C50—C51—C56178.62 (15)
C22—C23—C24—O4179.66 (13)C49—C50—C51—C52−0.20 (16)
C22—C23—C24—C250.2 (2)C56—C51—C52—C532.8 (2)
O4—C24—C25—C26−179.09 (12)C50—C51—C52—C53−178.19 (12)
C23—C24—C25—C260.3 (2)C56—C51—C52—N6−178.98 (12)
C24—C25—C26—C21−0.59 (19)C50—C51—C52—N6−0.01 (15)
C24—C25—C26—C27179.43 (14)C48—N6—C52—C53−17.7 (2)
N3—C21—C26—C25−179.31 (12)C49—N6—C52—C53178.16 (14)
C22—C21—C26—C250.4 (2)C48—N6—C52—C51164.35 (12)
N3—C21—C26—C270.67 (14)C49—N6—C52—C510.20 (15)
C22—C21—C26—C27−179.57 (12)C51—C52—C53—C54−1.9 (2)
C25—C26—C27—C28179.94 (14)N6—C52—C53—C54−179.63 (13)
C21—C26—C27—C28−0.04 (14)C52—C53—C54—C55−0.4 (2)
C21—N3—C28—C271.05 (15)C57—O9—C55—C56−12.7 (2)
C21—N3—C28—C29174.94 (11)C57—O9—C55—C54168.68 (13)
C26—C27—C28—N3−0.61 (15)C53—C54—C55—O9−179.51 (13)
C26—C27—C28—C29−173.26 (13)C53—C54—C55—C561.8 (2)
C30—N4—C29—O5152.36 (14)O9—C55—C56—C51−179.45 (13)
C33—N4—C29—O5−9.2 (2)C54—C55—C56—C51−0.9 (2)
C30—N4—C29—C28−28.5 (2)C52—C51—C56—C55−1.4 (2)
C33—N4—C29—C28169.92 (12)C50—C51—C56—C55179.95 (14)
N3—C28—C29—O5−20.34 (19)
D—H···AD—HH···AD···AD—H···A
N1—H1n···O50.91 (2)1.98 (2)2.8536 (16)159 (2)
N3—H3n···O20.91 (2)1.97 (2)2.8384 (16)159.0 (19)
N5—H5n···O8i0.90 (2)2.00 (2)2.8796 (15)163.9 (19)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1n⋯O50.91 (2)1.98 (2)2.8536 (16)159 (2)
N3—H3n⋯O20.91 (2)1.97 (2)2.8384 (16)159.0 (19)
N5—H5n⋯O8i0.90 (2)2.00 (2)2.8796 (15)163.9 (19)

Symmetry code: (i) .

  7 in total

1.  Qmol: a program for molecular visualization on Windows-based PCs.

Authors:  J D Gans; D Shalloway
Journal:  J Mol Graph Model       Date:  2001       Impact factor: 2.518

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Structural characterization of contaminants found in commercial preparations of melatonin: similarities to case-related compounds from L-tryptophan associated with eosinophilia-myalgia syndrome.

Authors:  B L Williamson; A J Tomlinson; P K Mishra; G J Gleich; S Naylor
Journal:  Chem Res Toxicol       Date:  1998-03       Impact factor: 3.739

4.  Design and synthesis of N-(3,3-diphenylpropenyl)alkanamides as a novel class of high-affinity MT2-selective melatonin receptor ligands.

Authors:  Annalida Bedini; Gilberto Spadoni; Giuseppe Gatti; Simone Lucarini; Giorgio Tarzia; Silvia Rivara; Simone Lorenzi; Alessio Lodola; Marco Mor; Valeria Lucini; Marilou Pannacci; Francesco Scaglione
Journal:  J Med Chem       Date:  2006-12-14       Impact factor: 7.446

Review 5.  Physiological and metabolic functions of melatonin.

Authors:  J Barrenetxe; P Delagrange; J A Martínez
Journal:  J Physiol Biochem       Date:  2004-03       Impact factor: 4.158

6.  Synthesis and pharmacological evaluation of pentacyclic 6a,7-dihydrodiindole and 2,3-dihydrodiindole derivatives as novel melatoninergic ligands.

Authors:  Mohamed I Attia; Paula A Witt-Enderby; Justin Julius
Journal:  Bioorg Med Chem       Date:  2008-07-10       Impact factor: 3.641

7.  5-Meth-oxy-1-[(5-meth-oxy-1H-indol-2-yl)meth-yl]-1H-indole.

Authors:  Mohamed I Attia; Nasser R El-Brollosy; Hazem A Ghabbour; Suhana Arshad; Hoong-Kun Fun
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-03-07
  7 in total

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