Literature DB >> 22719403

Bis(butan-1-aminium) naphthalene-1,5-disulfonate.

Yu Jin1.   

Abstract

In the title compound, 2C(4)H(12)N(+)·C(10)H(6)O(6)S(2) (2-), the anion lies on an inversion center, so the asymmetric unit contains half an anion and one cation which are linked by a strong N-H⋯O hydrogen bond. The crystal structure comprises discrete ions, which are linked into centrosymmetric R(4) (4)(12) loops by N-H⋯O inter-actions.

Entities:  

Year:  2012        PMID: 22719403      PMCID: PMC3379205          DOI: 10.1107/S1600536812018880

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Jin (2011a ▶,b ▶, 2012 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶).

Experimental

Crystal data

2C4H12NC10H6O6S2 2− M = 434.56 Monoclinic, a = 8.1532 (16) Å b = 9.2582 (19) Å c = 14.108 (5) Å β = 108.02 (3)° V = 1012.7 (5) Å3 Z = 2 Mo Kα radiation μ = 0.30 mm−1 T = 293 K 0.3 × 0.3 × 0.2 mm

Data collection

Rigaku Mercury CCD diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku, 2005 ▶) T min = 0.489, T max = 1.000 10171 measured reflections 2316 independent reflections 2039 reflections with I > 2σ(I) R int = 0.034

Refinement

R[F 2 > 2σ(F 2)] = 0.038 wR(F 2) = 0.094 S = 1.14 2316 reflections 128 parameters H-atom parameters constrained Δρmax = 0.24 e Å−3 Δρmin = −0.43 e Å−3 Data collection: CrystalClear (Rigaku, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812018880/bx2406sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812018880/bx2406Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812018880/bx2406Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
2C4H12N+·C10H6O6S22F(000) = 464
Mr = 434.56Dx = 1.425 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 3450 reflections
a = 8.1532 (16) Åθ = 6.2–55.3°
b = 9.2582 (19) ŵ = 0.30 mm1
c = 14.108 (5) ÅT = 293 K
β = 108.02 (3)°Block, colourless
V = 1012.7 (5) Å30.3 × 0.3 × 0.2 mm
Z = 2
Rigaku Mercury CCD diffractometer2316 independent reflections
Radiation source: fine-focus sealed tube2039 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.034
ω scansθmax = 27.5°, θmin = 3.0°
Absorption correction: multi-scan (CrystalClear; Rigaku, 2005)h = −10→10
Tmin = 0.489, Tmax = 1.000k = −12→12
10171 measured reflectionsl = −18→18
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.038Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.094H-atom parameters constrained
S = 1.14w = 1/[σ2(Fo2) + (0.0379P)2 + 0.4216P] where P = (Fo2 + 2Fc2)/3
2316 reflections(Δ/σ)max = 0.001
128 parametersΔρmax = 0.24 e Å3
0 restraintsΔρmin = −0.43 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.2319 (2)1.0297 (2)0.69402 (14)0.0364 (4)
H1D0.22611.09390.74730.044*
H1E0.22351.08800.63560.044*
C20.4015 (2)0.95077 (19)0.72490 (13)0.0332 (4)
H2A0.40620.88660.67140.040*
H2B0.40850.89190.78290.040*
C30.5553 (3)1.0519 (2)0.74938 (15)0.0405 (5)
H3A0.54391.11570.69320.049*
H3B0.55531.11120.80610.049*
C40.7256 (3)0.9722 (3)0.77313 (17)0.0524 (6)
H4A0.72860.91680.71610.079*
H4B0.73760.90870.82860.079*
H4C0.81861.04060.78960.079*
C50.2728 (2)1.06642 (17)0.97032 (12)0.0253 (3)
H50.16171.02940.95550.030*
C60.41452 (18)0.97062 (16)0.98793 (11)0.0198 (3)
C70.39614 (19)0.81664 (16)0.98343 (11)0.0204 (3)
C80.5368 (2)0.72878 (17)1.00271 (12)0.0259 (3)
H80.52280.62901.00090.031*
C90.2973 (2)1.21166 (18)0.97477 (13)0.0286 (4)
H90.20251.27270.96270.034*
N10.0850 (2)0.92591 (16)0.67115 (11)0.0338 (3)
H1A0.08400.88150.72690.041*
H1B−0.01360.97350.64550.041*
H1C0.09710.86080.62740.041*
O10.09524 (16)0.78595 (15)0.85199 (9)0.0380 (3)
O20.11042 (16)0.77995 (14)1.02545 (9)0.0343 (3)
O30.21663 (16)0.57911 (13)0.95327 (10)0.0353 (3)
S10.18812 (5)0.73440 (4)0.95082 (3)0.02387 (13)
U11U22U33U12U13U23
C10.0436 (11)0.0273 (9)0.0380 (10)0.0057 (8)0.0123 (8)0.0024 (7)
C20.0409 (10)0.0277 (9)0.0313 (9)0.0033 (7)0.0118 (8)−0.0002 (7)
C30.0491 (12)0.0362 (10)0.0351 (10)−0.0046 (9)0.0113 (9)0.0010 (8)
C40.0407 (12)0.0699 (16)0.0470 (12)−0.0053 (11)0.0139 (10)−0.0027 (11)
C50.0186 (7)0.0255 (8)0.0320 (8)−0.0005 (6)0.0078 (6)0.0015 (6)
C60.0197 (7)0.0203 (7)0.0206 (7)−0.0011 (6)0.0081 (6)0.0008 (5)
C70.0212 (7)0.0202 (7)0.0204 (7)−0.0037 (6)0.0073 (6)0.0008 (6)
C80.0282 (8)0.0166 (7)0.0333 (8)−0.0006 (6)0.0101 (7)0.0011 (6)
C90.0225 (8)0.0235 (8)0.0400 (9)0.0052 (6)0.0100 (7)0.0025 (7)
N10.0363 (8)0.0338 (8)0.0320 (8)0.0092 (6)0.0116 (6)0.0033 (6)
O10.0318 (7)0.0443 (8)0.0306 (7)−0.0089 (6)−0.0010 (5)0.0079 (5)
O20.0315 (6)0.0355 (7)0.0417 (7)−0.0059 (5)0.0198 (6)−0.0001 (5)
O30.0332 (7)0.0219 (6)0.0481 (8)−0.0085 (5)0.0084 (6)−0.0019 (5)
S10.0220 (2)0.0218 (2)0.0267 (2)−0.00585 (14)0.00604 (15)0.00118 (15)
C1—N11.491 (2)C5—H50.9300
C1—C21.505 (3)C6—C71.433 (2)
C1—H1D0.9700C6—C6i1.436 (3)
C1—H1E0.9700C7—C81.363 (2)
C2—C31.517 (3)C7—S11.7847 (15)
C2—H2A0.9700C8—C9i1.403 (2)
C2—H2B0.9700C8—H80.9300
C3—C41.516 (3)C9—C8i1.403 (2)
C3—H3A0.9700C9—H90.9300
C3—H3B0.9700N1—H1A0.8900
C4—H4A0.9600N1—H1B0.8900
C4—H4B0.9600N1—H1C0.8900
C4—H4C0.9600O1—S11.4464 (14)
C5—C91.358 (2)O2—S11.4493 (13)
C5—C61.416 (2)O3—S11.4550 (13)
N1—C1—C2110.73 (15)C6—C5—H5119.6
N1—C1—H1D109.5C5—C6—C7123.16 (14)
C2—C1—H1D109.5C5—C6—C6i118.93 (17)
N1—C1—H1E109.5C7—C6—C6i117.91 (17)
C2—C1—H1E109.5C8—C7—C6120.99 (14)
H1D—C1—H1E108.1C8—C7—S1118.08 (12)
C1—C2—C3112.76 (16)C6—C7—S1120.93 (11)
C1—C2—H2A109.0C7—C8—C9i120.22 (15)
C3—C2—H2A109.0C7—C8—H8119.9
C1—C2—H2B109.0C9i—C8—H8119.9
C3—C2—H2B109.0C5—C9—C8i121.16 (15)
H2A—C2—H2B107.8C5—C9—H9119.4
C4—C3—C2112.72 (18)C8i—C9—H9119.4
C4—C3—H3A109.0C1—N1—H1A109.5
C2—C3—H3A109.0C1—N1—H1B109.5
C4—C3—H3B109.0H1A—N1—H1B109.5
C2—C3—H3B109.0C1—N1—H1C109.5
H3A—C3—H3B107.8H1A—N1—H1C109.5
C3—C4—H4A109.5H1B—N1—H1C109.5
C3—C4—H4B109.5O1—S1—O2112.83 (9)
H4A—C4—H4B109.5O1—S1—O3112.40 (8)
C3—C4—H4C109.5O2—S1—O3111.89 (8)
H4A—C4—H4C109.5O1—S1—C7106.27 (8)
H4B—C4—H4C109.5O2—S1—C7106.42 (8)
C9—C5—C6120.77 (15)O3—S1—C7106.46 (7)
C9—C5—H5119.6
N1—C1—C2—C3−179.79 (15)S1—C7—C8—C9i177.76 (13)
C1—C2—C3—C4−175.79 (16)C6—C5—C9—C8i−0.3 (3)
C9—C5—C6—C7−179.48 (15)C8—C7—S1—O1−119.32 (13)
C9—C5—C6—C6i0.9 (3)C6—C7—S1—O159.88 (14)
C5—C6—C7—C8−178.83 (15)C8—C7—S1—O2120.19 (13)
C6i—C6—C7—C80.8 (3)C6—C7—S1—O2−60.61 (14)
C5—C6—C7—S12.0 (2)C8—C7—S1—O30.70 (15)
C6i—C6—C7—S1−178.37 (13)C6—C7—S1—O3179.90 (12)
C6—C7—C8—C9i−1.4 (2)
D—H···AD—HH···AD···AD—H···A
N1—H1A···O10.891.952.840 (2)177
N1—H1C···O2ii0.891.972.857 (2)177
N1—H1B···O3iii0.892.052.911 (2)162
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1A⋯O10.891.952.840 (2)177
N1—H1C⋯O2i0.891.972.857 (2)177
N1—H1B⋯O3ii0.892.052.911 (2)162

Symmetry codes: (i) ; (ii) .

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