Literature DB >> 22719380

Dibromido{N'-[1-(pyridin-2-yl)ethyl-idene]picolinohydrazide-κ(2)N',O}cadmium.

Mehmet Akkurt, Ali Akbar Khandar, Muhammad Nawaz Tahir, Seyed Abolfazl Hosseini Yazdi, Farhad Akbari Afkhami.   

Abstract

The title compound, [CdBr(2)(C(13)H(12)N(n class="Chemical">4)O)], was obtained from the reaction of Cd(NO(3))(2)·4H(2)O with meth-yl(pyridin-2-yl)methanone picolinoylhydrazone and sodium bromide. The Cd(2+) cation is ligated by one O atom and two N atoms of the tridentate ligand and two bromide anions, forming a Br(2)CdN(2)O polyhedron with a distorted trigonal-bipyramidal coordination geometry. In the crystal, non-classical C-H⋯Br hydrogen bonds are observed. In addition, π-π stacking inter-actions [centroid-centroid distance = 3.7455 (19) Å] contribute to the stabilization of the crystal structure.

Entities:  

Year:  2012        PMID: 22719380      PMCID: PMC3379182          DOI: 10.1107/S1600536812023185

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related complexes with similar tridentate ligands, see: Kasuga et al. (2001 ▶); Chen et al. (2005 ▶); Datta et al. (2011 ▶).

Experimental

Crystal data

[CdBr2(C13n class="Species">H12N4O)] M = 512.48 Monoclinic, a = 8.1336 (3) Å b = 13.6111 (5) Å c = 14.6102 (5) Å β = 90.550 (1)° V = 1617.38 (10) Å3 Z = 4 Mo Kα radiation μ = 6.29 mm−1 T = 296 K 0.32 × 0.18 × 0.16 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.267, T max = 0.365 15317 measured reflections 3874 independent reflections 2859 reflections with I > 2σ(I) R int = 0.032

Refinement

R[F 2 > 2σ(F 2)] = 0.028 wR(F 2) = 0.062 S = 1.02 3874 reflections 195 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.47 e Å−3 Δρmin = −0.54 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶) and PLATON. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812023185/vm2176sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812023185/vm2176Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[CdBr2(C13H12N4O)]F(000) = 976
Mr = 512.48Dx = 2.105 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 545 reflections
a = 8.1336 (3) Åθ = 4.2–18.3°
b = 13.6111 (5) ŵ = 6.29 mm1
c = 14.6102 (5) ÅT = 296 K
β = 90.550 (1)°Prism, colourless
V = 1617.38 (10) Å30.32 × 0.18 × 0.16 mm
Z = 4
Bruker Kappa APEXII CCD diffractometer3874 independent reflections
Radiation source: fine-focus sealed tube2859 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.032
ω scansθmax = 28.1°, θmin = 2.9°
Absorption correction: multi-scan (SADABS; Bruker, 2005)h = −10→10
Tmin = 0.267, Tmax = 0.365k = −17→18
15317 measured reflectionsl = −19→18
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.028Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.062H atoms treated by a mixture of independent and constrained refinement
S = 1.02w = 1/[σ2(Fo2) + (0.0245P)2 + 0.5132P] where P = (Fo2 + 2Fc2)/3
3874 reflections(Δ/σ)max = 0.001
195 parametersΔρmax = 0.47 e Å3
1 restraintΔρmin = −0.54 e Å3
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement on F2 for ALL reflections except those flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > σ(F2) is used only for calculating -R-factor-obs etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cd10.32238 (3)0.16938 (2)0.27655 (2)0.0429 (1)
Br10.04606 (5)0.15378 (3)0.35202 (3)0.0626 (1)
Br20.42596 (5)0.34049 (2)0.23982 (3)0.0550 (1)
O10.2555 (3)0.10824 (15)0.12175 (14)0.0493 (8)
N10.5195 (3)0.12698 (18)0.38976 (17)0.0438 (9)
N20.4511 (3)0.02135 (16)0.24438 (15)0.0370 (8)
N30.4106 (3)−0.02318 (18)0.16427 (17)0.0401 (8)
N40.3565 (3)−0.11450 (19)0.01147 (18)0.0495 (10)
C10.5632 (5)0.1867 (2)0.4579 (2)0.0555 (11)
C20.6781 (5)0.1618 (3)0.5230 (2)0.0585 (11)
C30.7498 (4)0.0712 (3)0.5186 (2)0.0585 (14)
C40.7079 (4)0.0090 (2)0.4477 (2)0.0487 (11)
C50.5925 (4)0.0390 (2)0.3832 (2)0.0385 (9)
C60.5464 (3)−0.0217 (2)0.3021 (2)0.0377 (9)
C70.6137 (5)−0.1226 (2)0.2915 (2)0.0577 (11)
C80.3114 (4)0.0268 (2)0.1050 (2)0.0392 (9)
C90.2810 (4)−0.0274 (2)0.01743 (19)0.0381 (9)
C100.1844 (4)0.0113 (2)−0.0505 (2)0.0473 (11)
C110.1592 (4)−0.0425 (2)−0.1296 (2)0.0523 (11)
C120.2361 (5)−0.1319 (2)−0.1370 (2)0.0543 (11)
C130.3333 (5)−0.1652 (2)−0.0658 (2)0.0569 (13)
H10.513400.248000.461400.0660*
H20.706800.205600.569300.0700*
H30.825900.051700.562900.0700*
H3N0.434 (4)−0.0819 (15)0.150 (2)0.056 (10)*
H40.75670−0.052600.443100.0580*
H7A0.54530−0.159200.249900.0860*
H7B0.61610−0.154800.349900.0860*
H7C0.72320−0.118900.267800.0860*
H100.136300.07280−0.043600.0570*
H110.09200−0.01880−0.176500.0630*
H120.22280−0.16960−0.189700.0650*
H130.38510−0.22580−0.071800.0680*
U11U22U33U12U13U23
Cd10.0474 (1)0.0383 (1)0.0428 (1)0.0045 (1)−0.0051 (1)−0.0016 (1)
Br10.0532 (2)0.0726 (3)0.0622 (2)−0.0011 (2)0.0063 (2)0.0021 (2)
Br20.0638 (2)0.0413 (2)0.0598 (2)−0.0049 (2)−0.0091 (2)0.0024 (2)
O10.0616 (15)0.0432 (13)0.0429 (12)0.0105 (11)−0.0085 (11)−0.0083 (10)
N10.0503 (16)0.0397 (14)0.0412 (15)−0.0023 (12)−0.0086 (12)0.0021 (11)
N20.0393 (14)0.0367 (13)0.0350 (14)−0.0022 (11)−0.0031 (11)−0.0016 (10)
N30.0476 (15)0.0354 (14)0.0373 (14)−0.0005 (12)−0.0045 (11)−0.0063 (11)
N40.0654 (19)0.0394 (15)0.0436 (16)0.0006 (13)−0.0089 (13)−0.0043 (12)
C10.075 (2)0.0403 (18)0.051 (2)−0.0047 (17)−0.0117 (18)−0.0030 (15)
C20.071 (2)0.061 (2)0.0433 (19)−0.0144 (19)−0.0141 (17)−0.0057 (16)
C30.056 (2)0.073 (3)0.046 (2)−0.0134 (18)−0.0175 (17)0.0083 (17)
C40.0471 (19)0.0505 (19)0.0483 (19)−0.0019 (15)−0.0065 (15)0.0107 (15)
C50.0371 (16)0.0401 (16)0.0381 (16)−0.0056 (13)−0.0025 (13)0.0074 (13)
C60.0359 (16)0.0361 (16)0.0411 (17)−0.0045 (13)0.0005 (13)0.0033 (13)
C70.065 (2)0.0458 (19)0.062 (2)0.0137 (17)−0.0072 (18)−0.0003 (17)
C80.0396 (16)0.0418 (17)0.0362 (16)−0.0092 (14)−0.0016 (13)0.0004 (13)
C90.0384 (16)0.0383 (16)0.0376 (16)−0.0058 (13)0.0000 (13)−0.0005 (12)
C100.0495 (19)0.0458 (18)0.0464 (19)0.0008 (15)−0.0065 (15)−0.0043 (15)
C110.056 (2)0.057 (2)0.0437 (19)−0.0102 (17)−0.0101 (16)0.0044 (15)
C120.069 (2)0.053 (2)0.0408 (19)−0.0194 (18)−0.0046 (17)−0.0082 (15)
C130.075 (3)0.0397 (18)0.056 (2)−0.0021 (17)−0.0054 (19)−0.0107 (16)
Cd1—Br12.5218 (5)C5—C61.490 (4)
Cd1—Br22.5359 (4)C6—C71.487 (4)
Cd1—O12.466 (2)C8—C91.495 (4)
Cd1—N12.364 (2)C9—C101.366 (4)
Cd1—N22.321 (2)C10—C111.382 (4)
O1—C81.224 (4)C11—C121.373 (4)
N1—C11.331 (4)C12—C131.377 (5)
N1—C51.341 (4)C1—H10.9300
N2—N31.356 (3)C2—H20.9300
N2—C61.282 (4)C3—H30.9300
N3—C81.360 (4)C4—H40.9300
N4—C91.338 (4)C7—H7A0.9600
N4—C131.335 (4)C7—H7B0.9600
N3—H3N0.85 (2)C7—H7C0.9600
C1—C21.370 (5)C10—H100.9300
C2—C31.366 (6)C11—H110.9300
C3—C41.378 (4)C12—H120.9300
C4—C51.385 (4)C13—H130.9300
Br1—Cd1—Br2117.98 (2)O1—C8—N3123.0 (3)
Br1—Cd1—O1100.54 (6)O1—C8—C9124.0 (3)
Br1—Cd1—N1105.95 (6)C8—C9—C10121.4 (3)
Br1—Cd1—N2114.91 (6)N4—C9—C8114.9 (3)
Br2—Cd1—O1100.76 (5)N4—C9—C10123.8 (3)
Br2—Cd1—N198.50 (6)C9—C10—C11118.9 (3)
Br2—Cd1—N2127.09 (6)C10—C11—C12118.1 (3)
O1—Cd1—N1134.55 (8)C11—C12—C13119.4 (3)
O1—Cd1—N267.49 (8)N4—C13—C12123.0 (3)
N1—Cd1—N268.01 (8)N1—C1—H1118.00
Cd1—O1—C8114.21 (19)C2—C1—H1119.00
Cd1—N1—C1123.3 (2)C1—C2—H2121.00
Cd1—N1—C5117.77 (19)C3—C2—H2121.00
C1—N1—C5118.9 (3)C2—C3—H3120.00
Cd1—N2—N3117.17 (17)C4—C3—H3120.00
Cd1—N2—C6122.33 (18)C3—C4—H4120.00
N3—N2—C6120.3 (2)C5—C4—H4120.00
N2—N3—C8117.6 (2)C6—C7—H7A109.00
C9—N4—C13116.9 (3)C6—C7—H7B109.00
C8—N3—H3N117 (2)C6—C7—H7C109.00
N2—N3—H3N126 (2)H7A—C7—H7B109.00
N1—C1—C2123.0 (3)H7A—C7—H7C109.00
C1—C2—C3118.7 (3)H7B—C7—H7C109.00
C2—C3—C4119.2 (3)C9—C10—H10121.00
C3—C4—C5119.4 (3)C11—C10—H10121.00
N1—C5—C4120.8 (3)C10—C11—H11121.00
C4—C5—C6122.8 (3)C12—C11—H11121.00
N1—C5—C6116.4 (3)C11—C12—H12120.00
N2—C6—C7125.1 (3)C13—C12—H12120.00
C5—C6—C7120.3 (2)N4—C13—H13119.00
N2—C6—C5114.6 (2)C12—C13—H13119.00
N3—C8—C9113.0 (2)
Br1—Cd1—O1—C8−107.6 (2)Cd1—N2—C6—C7170.9 (2)
Br2—Cd1—O1—C8131.0 (2)Cd1—N2—N3—C86.6 (3)
N1—Cd1—O1—C817.6 (3)Cd1—N2—C6—C5−11.0 (3)
N2—Cd1—O1—C85.2 (2)N3—N2—C6—C7−3.4 (4)
Br1—Cd1—N1—C1−76.1 (3)N3—N2—C6—C5174.8 (2)
Br2—Cd1—N1—C146.4 (3)N2—N3—C8—O1−1.5 (4)
O1—Cd1—N1—C1160.7 (2)N2—N3—C8—C9177.5 (2)
N2—Cd1—N1—C1173.0 (3)C9—N4—C13—C12−0.5 (5)
Br1—Cd1—N1—C5105.4 (2)C13—N4—C9—C8−179.7 (3)
Br2—Cd1—N1—C5−132.2 (2)C13—N4—C9—C10−0.4 (5)
O1—Cd1—N1—C5−17.9 (3)N1—C1—C2—C3−0.8 (6)
N2—Cd1—N1—C5−5.6 (2)C1—C2—C3—C41.8 (5)
Br1—Cd1—N2—N385.55 (18)C2—C3—C4—C5−0.9 (5)
Br2—Cd1—N2—N3−92.50 (19)C3—C4—C5—N1−1.0 (5)
O1—Cd1—N2—N3−5.94 (17)C3—C4—C5—C6177.0 (3)
N1—Cd1—N2—N3−176.5 (2)N1—C5—C6—N25.2 (4)
Br1—Cd1—N2—C6−88.8 (2)C4—C5—C6—C75.3 (4)
Br2—Cd1—N2—C693.1 (2)C4—C5—C6—N2−172.9 (3)
O1—Cd1—N2—C6179.7 (2)N1—C5—C6—C7−176.6 (3)
N1—Cd1—N2—C69.2 (2)O1—C8—C9—N4178.4 (3)
Cd1—O1—C8—C9177.1 (2)N3—C8—C9—C10−179.9 (3)
Cd1—O1—C8—N3−4.0 (4)O1—C8—C9—C10−1.0 (5)
Cd1—N1—C5—C62.6 (3)N3—C8—C9—N4−0.6 (4)
Cd1—N1—C1—C2−179.7 (3)N4—C9—C10—C111.4 (5)
C1—N1—C5—C42.0 (4)C8—C9—C10—C11−179.3 (3)
C1—N1—C5—C6−176.1 (3)C9—C10—C11—C12−1.5 (5)
C5—N1—C1—C2−1.1 (5)C10—C11—C12—C130.7 (5)
Cd1—N1—C5—C4−179.3 (2)C11—C12—C13—N40.3 (6)
C6—N2—N3—C8−178.9 (3)
D—H···AD—HH···AD···AD—H···A
C7—H7C···Br2i0.962.913.810 (4)157
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C7—H7C⋯Br2i0.962.913.810 (4)157

Symmetry code: (i) .

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