Literature DB >> 21522534

Dichlorido{N'-[1-(2-pyridin-2-yl)ethyl-idene]acetohydrazide-κN',O}copper(II).

Amitabha Datta1, Kuheli Das, Yan-Ming Jhou, Jui-Hsien Huang, Hon Man Lee.   

Abstract

In the title compound, [CuCl(2)(C(9)H(11)N(3)O)], the Cu(II) atom is in a distorted square-pyramidal CuCl(2)N(2)O coordination geometry. The tridentate acetohydrazide ligand chelates in a meridional fashion. The chloride ligand in the axial position forms a long Cu-Cl distance of 2.4892 (9) Å. In contrast, the Cu-Cl distance from the equatorial chloride ligand is much shorter [2.2110 (7) Å]. Inter-molecular N-H⋯Cl and C-H⋯Cl hydrogen bonds link the complexes into a three-dimensional network.

Entities:  

Year:  2010        PMID: 21522534      PMCID: PMC3050222          DOI: 10.1107/S1600536810053195

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For a related copper(II) complex with a similar tridentate ligand, see: Recio Despaigne et al. (2009 ▶).

Experimental

Crystal data

[CuCl2(C9H11N3O)] M = 311.65 Monoclinic, a = 6.6501 (15) Å b = 15.680 (3) Å c = 13.103 (2) Å β = 118.769 (12)° V = 1197.7 (4) Å3 Z = 4 Mo Kα radiation μ = 2.25 mm−1 T = 150 K 0.25 × 0.20 × 0.19 mm

Data collection

Bruker SMART APEXII diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2003 ▶) T min = 0.603, T max = 0.674 16039 measured reflections 3081 independent reflections 2534 reflections with I > 2.0σ(I) R int = 0.027

Refinement

R[F 2 > 2σ(F 2)] = 0.030 wR(F 2) = 0.075 S = 1.02 3081 reflections 147 parameters H-atom parameters constrained Δρmax = 0.51 e Å−3 Δρmin = −0.54 e Å−3 Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: DIAMOND (Brandenburg, 2006 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810053195/pv2372sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810053195/pv2372Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[CuCl2(C9H11N3O)]F(000) = 628
Mr = 311.65Dx = 1.728 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 6047 reflections
a = 6.6501 (15) Åθ = 2.2–27.7°
b = 15.680 (3) ŵ = 2.25 mm1
c = 13.103 (2) ÅT = 150 K
β = 118.769 (12)°Prism, green
V = 1197.7 (4) Å30.25 × 0.20 × 0.19 mm
Z = 4
Bruker SMART APEXII diffractometer3081 independent reflections
Radiation source: fine-focus sealed tube2534 reflections with I > 2.0σ(I)
graphiteRint = 0.027
ω scansθmax = 28.8°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Sheldrick, 2003)h = −7→8
Tmin = 0.603, Tmax = 0.674k = −21→21
16039 measured reflectionsl = −17→17
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.030Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.075H-atom parameters constrained
S = 1.02w = 1/[σ2(Fo2) + (0.0302P)2 + 1.0145P] where P = (Fo2 + 2Fc2)/3
3081 reflections(Δ/σ)max = 0.001
147 parametersΔρmax = 0.51 e Å3
0 restraintsΔρmin = −0.54 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cu10.95537 (5)0.835509 (17)0.19694 (2)0.03082 (9)
Cl10.77693 (11)0.94146 (4)0.23143 (6)0.04312 (15)
Cl21.30421 (10)0.81769 (4)0.38962 (5)0.04150 (15)
O11.0897 (3)0.90737 (10)0.11255 (15)0.0412 (4)
N11.1191 (3)0.77854 (12)0.04581 (16)0.0331 (4)
H11.15810.74620.00180.040*
N21.0103 (3)0.74896 (11)0.10466 (15)0.0293 (4)
N30.7804 (3)0.73440 (12)0.21178 (16)0.0324 (4)
C11.2447 (5)0.90327 (18)−0.0185 (2)0.0453 (6)
H1A1.39340.92940.03330.068*
H1B1.13930.9470−0.06990.068*
H1C1.26510.8590−0.06560.068*
C21.1484 (4)0.86451 (15)0.05182 (19)0.0335 (5)
C30.9627 (5)0.60109 (15)0.0319 (2)0.0457 (6)
H3A1.05620.6197−0.00330.069*
H3B0.81110.5834−0.02950.069*
H3C1.03800.55290.08420.069*
C40.9369 (4)0.67248 (13)0.09883 (18)0.0304 (4)
C50.8118 (4)0.66154 (14)0.16587 (19)0.0309 (4)
C60.7298 (4)0.58379 (16)0.1791 (2)0.0424 (6)
H60.75340.53340.14600.051*
C70.6118 (5)0.58128 (19)0.2426 (3)0.0532 (7)
H70.55660.52860.25510.064*
C80.5757 (5)0.6552 (2)0.2867 (3)0.0529 (7)
H80.49160.65460.32820.063*
C90.6626 (4)0.73087 (18)0.2702 (2)0.0425 (6)
H90.63770.78200.30150.051*
U11U22U33U12U13U23
Cu10.03910 (16)0.02660 (14)0.03380 (15)0.00029 (11)0.02316 (12)−0.00381 (11)
Cl10.0510 (4)0.0394 (3)0.0457 (3)0.0123 (3)0.0286 (3)−0.0023 (2)
Cl20.0372 (3)0.0551 (4)0.0348 (3)−0.0009 (3)0.0194 (2)0.0016 (3)
O10.0604 (11)0.0295 (8)0.0477 (10)−0.0026 (7)0.0372 (9)−0.0024 (7)
N10.0447 (11)0.0317 (9)0.0341 (10)0.0001 (8)0.0280 (9)−0.0009 (8)
N20.0362 (9)0.0288 (9)0.0295 (9)0.0012 (7)0.0211 (8)−0.0011 (7)
N30.0328 (9)0.0363 (10)0.0328 (9)−0.0008 (8)0.0196 (8)−0.0005 (8)
C10.0559 (16)0.0463 (14)0.0428 (13)−0.0087 (12)0.0310 (12)0.0032 (11)
C20.0381 (12)0.0335 (11)0.0308 (11)−0.0005 (9)0.0180 (9)0.0019 (9)
C30.0772 (19)0.0281 (11)0.0453 (14)−0.0010 (12)0.0402 (14)−0.0053 (10)
C40.0382 (11)0.0272 (10)0.0275 (10)0.0020 (9)0.0173 (9)0.0001 (8)
C50.0311 (10)0.0319 (11)0.0285 (10)−0.0003 (9)0.0134 (8)0.0004 (9)
C60.0414 (13)0.0364 (13)0.0509 (14)−0.0033 (10)0.0234 (11)0.0045 (11)
C70.0456 (15)0.0498 (16)0.0685 (19)−0.0052 (12)0.0309 (14)0.0175 (14)
C80.0440 (15)0.067 (2)0.0615 (18)0.0006 (13)0.0366 (14)0.0145 (15)
C90.0393 (13)0.0541 (16)0.0443 (14)0.0026 (11)0.0282 (11)0.0022 (12)
Cu1—N21.9653 (18)C1—H1C0.9800
Cu1—N32.0305 (19)C3—C41.482 (3)
Cu1—O12.0592 (17)C3—H3A0.9800
Cu1—Cl12.2110 (7)C3—H3B0.9800
Cu1—Cl22.4892 (9)C3—H3C0.9800
O1—C21.240 (3)C4—C51.482 (3)
N1—C21.359 (3)C5—C61.380 (3)
N1—N21.367 (3)C6—C71.392 (4)
N1—H10.8900C6—H60.9500
N2—C41.283 (3)C7—C81.367 (4)
N3—C91.334 (3)C7—H70.9500
N3—C51.353 (3)C8—C91.381 (4)
C1—C21.483 (3)C8—H80.9500
C1—H1A0.9800C9—H90.9500
C1—H1B0.9800
N2—Cu1—N378.73 (8)O1—C2—C1122.7 (2)
N2—Cu1—O177.90 (7)N1—C2—C1117.6 (2)
N3—Cu1—O1153.54 (7)C4—C3—H3A109.5
N2—Cu1—Cl1157.16 (6)C4—C3—H3B109.5
N3—Cu1—Cl1100.28 (6)H3A—C3—H3B109.5
O1—Cu1—Cl196.47 (5)C4—C3—H3C109.5
N2—Cu1—Cl2100.84 (6)H3A—C3—H3C109.5
N3—Cu1—Cl296.46 (6)H3B—C3—H3C109.5
O1—Cu1—Cl299.95 (6)N2—C4—C3126.3 (2)
Cl1—Cu1—Cl2101.94 (3)N2—C4—C5112.26 (19)
C2—O1—Cu1113.58 (15)C3—C4—C5121.4 (2)
C2—N1—N2113.82 (18)N3—C5—C6122.3 (2)
C2—N1—H1121.4N3—C5—C4114.61 (19)
N2—N1—H1124.6C6—C5—C4123.0 (2)
C4—N2—N1124.94 (19)C5—C6—C7118.1 (3)
C4—N2—Cu1120.27 (15)C5—C6—H6121.0
N1—N2—Cu1114.72 (14)C7—C6—H6121.0
C9—N3—C5118.6 (2)C8—C7—C6119.5 (3)
C9—N3—Cu1127.53 (18)C8—C7—H7120.2
C5—N3—Cu1113.48 (15)C6—C7—H7120.2
C2—C1—H1A109.5C7—C8—C9119.4 (3)
C2—C1—H1B109.5C7—C8—H8120.3
H1A—C1—H1B109.5C9—C8—H8120.3
C2—C1—H1C109.5N3—C9—C8122.0 (3)
H1A—C1—H1C109.5N3—C9—H9119.0
H1B—C1—H1C109.5C8—C9—H9119.0
O1—C2—N1119.6 (2)
N2—Cu1—O1—C2−3.14 (17)Cu1—O1—C2—C1178.65 (18)
N3—Cu1—O1—C2−31.6 (3)N2—N1—C2—O14.0 (3)
Cl1—Cu1—O1—C2−160.69 (16)N2—N1—C2—C1−174.3 (2)
Cl2—Cu1—O1—C295.94 (17)N1—N2—C4—C32.5 (4)
C2—N1—N2—C4170.3 (2)Cu1—N2—C4—C3179.18 (19)
C2—N1—N2—Cu1−6.6 (2)N1—N2—C4—C5−175.88 (19)
N3—Cu1—N2—C4−4.33 (17)Cu1—N2—C4—C50.8 (3)
O1—Cu1—N2—C4−171.84 (19)C9—N3—C5—C6−1.2 (3)
Cl1—Cu1—N2—C4−94.1 (2)Cu1—N3—C5—C6172.25 (18)
Cl2—Cu1—N2—C490.18 (17)C9—N3—C5—C4177.8 (2)
N3—Cu1—N2—N1172.68 (16)Cu1—N3—C5—C4−8.8 (2)
O1—Cu1—N2—N15.18 (14)N2—C4—C5—N35.4 (3)
Cl1—Cu1—N2—N182.9 (2)C3—C4—C5—N3−173.0 (2)
Cl2—Cu1—N2—N1−92.80 (14)N2—C4—C5—C6−175.6 (2)
N2—Cu1—N3—C9179.8 (2)C3—C4—C5—C65.9 (4)
O1—Cu1—N3—C9−151.88 (19)N3—C5—C6—C7−0.2 (4)
Cl1—Cu1—N3—C9−23.5 (2)C4—C5—C6—C7−179.1 (2)
Cl2—Cu1—N3—C980.0 (2)C5—C6—C7—C81.7 (4)
N2—Cu1—N3—C57.08 (15)C6—C7—C8—C9−1.8 (4)
O1—Cu1—N3—C535.4 (3)C5—N3—C9—C81.1 (4)
Cl1—Cu1—N3—C5163.84 (14)Cu1—N3—C9—C8−171.3 (2)
Cl2—Cu1—N3—C5−92.74 (15)C7—C8—C9—N30.4 (4)
Cu1—O1—C2—N10.5 (3)
D—H···AD—HH···AD···AD—H···A
N1—H1···Cl2i0.892.343.226 (2)170
C1—H1A···Cl1ii0.982.633.529 (3)153
C3—H3A···N10.982.562.945 (3)104
C3—H3A···Cl2i0.982.813.785 (3)176
C3—H3C···Cl1iii0.982.753.703 (3)165
C7—H7···Cl1iv0.952.683.529 (3)149
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯Cl2i0.892.343.226 (2)170
C1—H1A⋯Cl1ii0.982.633.529 (3)153
C3—H3A⋯Cl2i0.982.813.785 (3)176
C3—H3C⋯Cl1iii0.982.753.703 (3)165
C7—H7⋯Cl1iv0.952.683.529 (3)149

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

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1.  Dichlorido{N'-[(pyridin-2-yl)methyl-idene-κN]acetohydrazide-κN',O}copper(II).

Authors:  Amitabha Datta; Shiann-Cherng Sheu; Pei-Hsin Liu; Jui-Hsien Huang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-11-30

2.  Dibromido{N'-[1-(pyridin-2-yl)ethyl-idene]picolinohydrazide-κ(2)N',O}cadmium.

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