Literature DB >> 22718819

Large ribosomal protein 4 increases efficiency of viral recoding sequences.

Lisa Green1, Brian Houck-Loomis, Andrew Yueh, Stephen P Goff.   

Abstract

Expression of retroviral replication enzymes (Pol) requires a controlled translational recoding event to bypass the stop codon at the end of gag. This recoding event occurs either by direct suppression of termination via the insertion of an amino acid at the stop codon (readthrough) or by alteration of the mRNA reading frame (frameshift). Here we report the effects of a host protein, large ribosomal protein 4 (RPL4), on the efficiency of recoding. Using a dual luciferase reporter assay, we found that transfection of cells with a plasmid encoding RPL4 cDNA increases recoding efficiency in a dose-dependent manner, with a maximal enhancement of nearly twofold. Expression of RPL4 increases recoding of reporters containing retroviral readthrough and frameshift sequences, as well as the Sindbis virus leaky termination signal. RPL4-induced enhancement of recoding is cell line specific and appears to be specific to RPL4 among ribosomal proteins. Cotransfection of RPL4 cDNA with Moloney murine leukemia proviral DNA results in Gag processing defects and a reduction of viral particle formation, presumably caused by the RPL4-dependent alteration of the Gag-to-Gag-Pol ratio required for virion assembly and release.

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Year:  2012        PMID: 22718819      PMCID: PMC3416150          DOI: 10.1128/JVI.01053-12

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  59 in total

1.  Mutagenesis of the in-frame opal termination codon preceding nsP4 of Sindbis virus: studies of translational readthrough and its effect on virus replication.

Authors:  G P Li; C M Rice
Journal:  J Virol       Date:  1989-03       Impact factor: 5.103

2.  Evidence that a downstream pseudoknot is required for translational read-through of the Moloney murine leukemia virus gag stop codon.

Authors:  N M Wills; R F Gesteland; J F Atkins
Journal:  Proc Natl Acad Sci U S A       Date:  1991-08-15       Impact factor: 11.205

3.  Suppression of UAA and UGA termination codons in mutant murine leukemia viruses.

Authors:  Y X Feng; J G Levin; D L Hatfield; T S Schaefer; R J Gorelick; A Rein
Journal:  J Virol       Date:  1989-06       Impact factor: 5.103

4.  Retroviral gag gene amber codon suppression is caused by an intrinsic cis-acting component of the viral mRNA.

Authors:  A T Panganiban
Journal:  J Virol       Date:  1988-10       Impact factor: 5.103

5.  HIV expression strategies: ribosomal frameshifting is directed by a short sequence in both mammalian and yeast systems.

Authors:  W Wilson; M Braddock; S E Adams; P D Rathjen; S M Kingsman; A J Kingsman
Journal:  Cell       Date:  1988-12-23       Impact factor: 41.582

6.  Glucocorticoids selectively inhibit translation of ribosomal protein mRNAs in P1798 lymphosarcoma cells.

Authors:  O Meyuhas; E A Thompson; R P Perry
Journal:  Mol Cell Biol       Date:  1987-08       Impact factor: 4.272

7.  A segment of the 5' nontranslated region of encephalomyocarditis virus RNA directs internal entry of ribosomes during in vitro translation.

Authors:  S K Jang; H G Kräusslich; M J Nicklin; G M Duke; A C Palmenberg; E Wimmer
Journal:  J Virol       Date:  1988-08       Impact factor: 5.103

8.  An equilibrium-dependent retroviral mRNA switch regulates translational recoding.

Authors:  Brian Houck-Loomis; Michael A Durney; Carolina Salguero; Neelaabh Shankar; Julia M Nagle; Stephen P Goff; Victoria M D'Souza
Journal:  Nature       Date:  2011-11-27       Impact factor: 49.962

9.  RNA pseudoknots downstream of the frameshift sites of retroviruses.

Authors:  S Y Le; B A Shapiro; J H Chen; R Nussinov; J V Maizel
Journal:  Genet Anal Tech Appl       Date:  1991-11

10.  cis Acting RNA sequences control the gag-pol translation readthrough in murine leukemia virus.

Authors:  A Honigman; D Wolf; S Yaish; H Falk; A Panet
Journal:  Virology       Date:  1991-07       Impact factor: 3.616

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  8 in total

Review 1.  Ribosomal frameshifting and transcriptional slippage: From genetic steganography and cryptography to adventitious use.

Authors:  John F Atkins; Gary Loughran; Pramod R Bhatt; Andrew E Firth; Pavel V Baranov
Journal:  Nucleic Acids Res       Date:  2016-07-19       Impact factor: 16.971

2.  Ribosome Protein L4 is essential for Epstein-Barr Virus Nuclear Antigen 1 function.

Authors:  Chih-Lung Shen; Cheng-Der Liu; Ren-In You; Yung-Hao Ching; Jun Liang; Liangru Ke; Ya-Lin Chen; Hong-Chi Chen; Hao-Jen Hsu; Je-Wen Liou; Elliott Kieff; Chih-Wen Peng
Journal:  Proc Natl Acad Sci U S A       Date:  2016-02-08       Impact factor: 11.205

Review 3.  Ribosomal proteins: functions beyond the ribosome.

Authors:  Xiang Zhou; Wen-Juan Liao; Jun-Ming Liao; Peng Liao; Hua Lu
Journal:  J Mol Cell Biol       Date:  2015-03-03       Impact factor: 6.216

4.  Ribosome profiling reveals pervasive and regulated stop codon readthrough in Drosophila melanogaster.

Authors:  Joshua G Dunn; Catherine K Foo; Nicolette G Belletier; Elizabeth R Gavis; Jonathan S Weissman
Journal:  Elife       Date:  2013-12-03       Impact factor: 8.140

5.  Nucleolar trafficking of the mouse mammary tumor virus gag protein induced by interaction with ribosomal protein L9.

Authors:  Andrea R Beyer; Darrin V Bann; Breanna Rice; Ingrid S Pultz; Melissa Kane; Stephen P Goff; Tatyana V Golovkina; Leslie J Parent
Journal:  J Virol       Date:  2012-11-07       Impact factor: 5.103

Review 6.  Fatal attraction: The roles of ribosomal proteins in the viral life cycle.

Authors:  Clare M Miller; Sangeetha Selvam; Gabriele Fuchs
Journal:  Wiley Interdiscip Rev RNA       Date:  2020-07-12       Impact factor: 9.957

7.  Modulation of stop codon read-through efficiency and its effect on the replication of murine leukemia virus.

Authors:  Eszter Csibra; Ian Brierley; Nerea Irigoyen
Journal:  J Virol       Date:  2014-07-02       Impact factor: 5.103

8.  A Selection of Important Genes and Their Correlated Behavior in Alzheimer's Disease.

Authors:  Yazeli E Cruz-Rivera; Jaileene Perez-Morales; Yaritza M Santiago; Valerie M Gonzalez; Luisa Morales; Mauricio Cabrera-Rios; Clara E Isaza
Journal:  J Alzheimers Dis       Date:  2018       Impact factor: 4.472

  8 in total

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