Literature DB >> 2271687

A tetrahedral zinc(II)-binding site introduced into a designed protein.

L Regan1, N D Clarke.   

Abstract

The ultimate goal of protein engineering is to create novel proteins which will adopt predetermined structures, bind specified ligands, and catalyze new reactions. Here we describe the successful introduction of metal-binding activity into a model four helix bundle protein. The designed binding site is tetrahedral and is formed by two Cys and two His ligands on adjacent helices. We have introduced this site into the protein and characterized the binding activity. Using 65Zn(II), we have shown that the protein binds Zn(II), that the sulfhydryls are essential for binding, and that binding occurs to the protein monomer. The designed protein binds metals with high affinity: we estimate the dissociation constants as 2.5 X 10(-8) M for Zn(II) and 1.6 X 10(-5) M for Co(II). The characteristic absorption spectrum of the Co(II)-substituted protein fully supports the model of a tetrahedral binding site comprised of two Cys and two His ligands. Circular dichroism studies indicate that no significant changes in secondary structure occur between the metal-bound and metal-free forms of the protein. However, the metal-bound form is substantially stabilized toward denaturation by GuHCl compared to the metal-free form.

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Year:  1990        PMID: 2271687     DOI: 10.1021/bi00501a003

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  37 in total

Review 1.  De novo design of helical bundles as models for understanding protein folding and function.

Authors:  R B Hill; D P Raleigh; A Lombardi; W F DeGrado
Journal:  Acc Chem Res       Date:  2000-11       Impact factor: 22.384

2.  Immunohistowax processing, a new fixation and embedding method for light microscopy, which preserves antigen immunoreactivity and morphological structures: visualisation of dendritic cells in peripheral organs.

Authors:  B Pajak; T De Smedt; V Moulin; C De Trez; R Maldonado-López; G Vansanten; E Briend; J Urbain; O Leo; M Moser
Journal:  J Clin Pathol       Date:  2000-07       Impact factor: 3.411

3.  Soft metal ions, Cd(II) and Hg(II), induce triple-stranded alpha-helical assembly and folding of a de novo designed peptide in their trigonal geometries.

Authors:  X Li; K Suzuki; K Kanaori; K Tajima; A Kashiwada; H Hiroaki; D Kohda; T Tanaka
Journal:  Protein Sci       Date:  2000-07       Impact factor: 6.725

4.  Engineering a zinc binding site into the de novo designed protein DS119 with a βαβ structure.

Authors:  Cheng Zhu; Changsheng Zhang; Huanhuan Liang; Luhua Lai
Journal:  Protein Cell       Date:  2012-01-10       Impact factor: 14.870

5.  Designing functional metalloproteins: from structural to catalytic metal sites.

Authors:  Melissa L Zastrow; Vincent L Pecoraro
Journal:  Coord Chem Rev       Date:  2013-09       Impact factor: 22.315

6.  Introduction of a [4Fe-4S (S-cys)4]+1,+2 iron-sulfur center into a four-alpha helix protein using design parameters from the domain of the Fx cluster in the Photosystem I reaction center.

Authors:  M P Scott; J Biggins
Journal:  Protein Sci       Date:  1997-02       Impact factor: 6.725

7.  A novel, multilayer structure of a helical peptide.

Authors:  K S Taylor; M Z Lou; T M Chin; N C Yang; R M Garavito
Journal:  Protein Sci       Date:  1996-03       Impact factor: 6.725

8.  Modulation of zinc- and cobalt-binding affinities through changes in the stability of the zinc ribbon protein L36.

Authors:  Wenpeng Kou; Harsha S Kolla; Alfonso Ortiz-Acevedo; Donovan C Haines; Matthew Junker; Gregg R Dieckmann
Journal:  J Biol Inorg Chem       Date:  2005-03-04       Impact factor: 3.358

9.  Scorpion toxins as natural scaffolds for protein engineering.

Authors:  C Vita; C Roumestand; F Toma; A Ménez
Journal:  Proc Natl Acad Sci U S A       Date:  1995-07-03       Impact factor: 11.205

10.  Disulfide crosslinks to probe the structure and flexibility of a designed four-helix bundle protein.

Authors:  L Regan; A Rockwell; Z Wasserman; W DeGrado
Journal:  Protein Sci       Date:  1994-12       Impact factor: 6.725

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