Literature DB >> 2271523

L-methionine decarboxylase from Dryopteris filix-mas: purification, characterization, substrate specificity, abortive transamination of the coenzyme, and stereochemical courses of substrate decarboxylation and coenzyme transamination.

D E Stevenson1, M Akhtar, D Gani.   

Abstract

L-Methionine decarboxylase from the male fern Dryopteris filix-mas has been purified 256-fold from acetone powder extracts to very near homogeneity. The enzyme is membrane-associated and requires detergent for solubilization during the initial extraction. The enzyme is a homodimer of subunit Mr 57,000 and shows a pH optimum at approximately 5.0 with 20 mM (2S)-methionine as substrate. The specific activity, kcat, for methionine is approximately 50 mol s(-1) (mol of active site)(-1) at pH 4.5 and below. A wide range of straight- and branched-chain (2S)-alkylamino acids are substrates for the enzyme. The values for the rate of decarboxylation, Vmax, and for the apparent Michaelis constant, Km, however, vary with structure and with the chirality at C-3. The pH dependence of V and V/K has been examined for three substrates: (2S)-methionine, valine, and leucine. Pyridoxal 5'-phosphate (PLP) is required for activity, and in the absence of excess PLP, the activity of the enzyme in incubations reduced with respect to time. The addition of PLP fully restores the activity, indicating that an abortive decarboxylation-transamination accompanies the normal decarboxylation reaction. The occurrence of the abortive reaction was confirmed by showing that [35S]methionine is converted to labeled 3-(methylthio)propionaldehyde while [4'-3H]PLP is converted to labeled pyridoxamine 5'-phosphate (PMP). The decarboxylation of (2S)-methionine gave 3-(methylthio)-1-aminopropane. Preparation of the N-camphanamide derivative of the amine allowed the C-1 methylene protons to be distinguished by 1H NMR spectroscopy. Synthetic samples of the camphanamide were prepared in which each of the C-1 methylene protons was replaced by deuterium. When (2S)-methionine and the C-2 deuteriated isotopomer were incubated with the enzyme in deuterium oxide and protium oxide, respectively, and the products were converted to their camphanamide derivatives and analyzed by 1H NMR spectroscopy, it was evident that decarboxylation occurred with retention of configuration at C-2. When the decarboxylation of six other substrates was studied, examination of the N-camphanamide derivatives of the amines indicated that decarboxylation occurred stereospecifically and, by analogy, with retention of configuration at C-2. When tritiated pyridoxal phosphate was incubated with the enzyme, tritiated pyridoxamine phosphate was formed. Analysis of the chirality of the methylene group at C-4' indicated that, during abortive transamination, protonation occurred from the 4'-si face of the coenzyme, the same stereochemical result as that obtained for several bona fide transaminase enzymes.(ABSTRACT TRUNCATED AT 400 WORDS)

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Year:  1990        PMID: 2271523     DOI: 10.1021/bi00485a013

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  9 in total

Review 1.  A comparison of pyridoxal 5'-phosphate dependent decarboxylase and transaminase enzymes at a molecular level.

Authors:  D M Smith; N R Thomas; D Gani
Journal:  Experientia       Date:  1991-12-01

2.  The Methanosarcina mazei MM2060 Gene Encodes a Bifunctional Kinase/Decarboxylase Enzyme Involved in Cobamide Biosynthesis.

Authors:  Norbert K Tavares; Carmen L Zayas; Jorge C Escalante-Semerena
Journal:  Biochemistry       Date:  2018-07-13       Impact factor: 3.162

3.  Dimethylsulfoniopropionate biosynthesis in Spartina alterniflora1. Evidence that S-methylmethionine and dimethylsulfoniopropylamine are intermediates.

Authors:  M G Kocsis; K D Nolte; D Rhodes; T L Shen; D A Gage; A D Hanson
Journal:  Plant Physiol       Date:  1998-05       Impact factor: 8.340

4.  Biochemical evidence for two novel enzymes in the biosynthesis of 3-dimethylsulfoniopropionate in Spartina alterniflora.

Authors:  M G Kocsis; A D Hanson
Journal:  Plant Physiol       Date:  2000-07       Impact factor: 8.340

5.  Ornithine and glutamate decarboxylases catalyse an oxidative deamination of their alpha-methyl substrates.

Authors:  M Bertoldi; V Carbone; C Borri Voltattorni
Journal:  Biochem J       Date:  1999-09-15       Impact factor: 3.857

6.  Reaction of dopa decarboxylase with L-aromatic amino acids under aerobic and anaerobic conditions.

Authors:  M Bertoldi; C Borri Voltattorni
Journal:  Biochem J       Date:  2000-12-01       Impact factor: 3.857

7.  Integrating metabolomics and transcriptomics data to discover a biocatalyst that can generate the amine precursors for alkamide biosynthesis.

Authors:  Ludmila Rizhsky; Huanan Jin; Michael R Shepard; Harry W Scott; Alicen M Teitgen; M Ann Perera; Vandana Mhaske; Adarsh Jose; Xiaobin Zheng; Matt Crispin; Eve S Wurtele; Dallas Jones; Manhoi Hur; Elsa Góngora-Castillo; C Robin Buell; Robert E Minto; Basil J Nikolau
Journal:  Plant J       Date:  2016-09-27       Impact factor: 6.417

8.  A hydrolase from Lactobacillus sakei moonlights as a transaminase.

Authors:  Quirin Sinz; Simone Freiding; Rudi F Vogel; Wilfried Schwab
Journal:  Appl Environ Microbiol       Date:  2013-01-25       Impact factor: 4.792

9.  Engineering a pyridoxal 5'-phosphate supply for cadaverine production by using Escherichia coli whole-cell biocatalysis.

Authors:  Weichao Ma; Weijia Cao; Bowen Zhang; Kequan Chen; Quanzhen Liu; Yan Li; Pingkai Ouyang
Journal:  Sci Rep       Date:  2015-10-22       Impact factor: 4.379

  9 in total

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