Literature DB >> 22711821

Mouse model of endemic Burkitt translocations reveals the long-range boundaries of Ig-mediated oncogene deregulation.

Alexander L Kovalchuk1, Camilo Ansarah-Sobrinho, Ofir Hakim, Wolfgang Resch, Helena Tolarová, Wendy Dubois, Arito Yamane, Makiko Takizawa, Isaac Klein, Gordon L Hager, Herbert C Morse, Michael Potter, Michel C Nussenzweig, Rafael Casellas.   

Abstract

Human Burkitt lymphomas are divided into two main clinical variants: the endemic form, affecting African children infected with malaria and the Epstein-Barr virus, and the sporadic form, distributed across the rest of the world. However, whereas sporadic translocations decapitate Myc from 5' proximal regulatory elements, most endemic events occur hundreds of kilobases away from Myc. The origin of these rearrangements and how they deregulate oncogenes at such distances remain unclear. We here recapitulate endemic Burkitt lymphoma-like translocations in plasmacytomas from uracil N-glycosylase and activation-induced cytidine deaminase-deficient mice. Mapping of translocation breakpoints using an acetylated histone H3 lysine 9 chromatin immunoprecipitation sequencing approach reveals Igh fusions up to ∼350 kb upstream of Myc or the related oncogene Mycn. A comprehensive analysis of epigenetic marks, PolII recruitment, and transcription in tumor cells demonstrates that the 3' Igh enhancer (Eα) vastly remodels ∼450 kb of chromatin into translocated sequences, leading to significant polymerase occupancy and constitutive oncogene expression. We show that this long-range epigenetic reprogramming is directly proportional to the physical interaction of Eα with translocated sites. Our studies thus uncover the extent of epigenetic remodeling by Ig 3' enhancers and provide a rationale for the long-range deregulation of translocated oncogenes in endemic Burkitt lymphomas. The data also shed light on the origin of endemic-like chromosomal rearrangements.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22711821      PMCID: PMC3390838          DOI: 10.1073/pnas.1200106109

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  62 in total

1.  Translocation-capture sequencing reveals the extent and nature of chromosomal rearrangements in B lymphocytes.

Authors:  Isaac A Klein; Wolfgang Resch; Mila Jankovic; Thiago Oliveira; Arito Yamane; Hirotaka Nakahashi; Michela Di Virgilio; Anne Bothmer; Andre Nussenzweig; Davide F Robbiani; Rafael Casellas; Michel C Nussenzweig
Journal:  Cell       Date:  2011-09-30       Impact factor: 41.582

2.  Altered myc gene transcription and intron-induced stabilization of myc RNAs in two mouse plasmacytomas.

Authors:  S R Bauer; M Piechaczyk; R P Nordan; J D Owens; A Nepveu; K B Marcu; J F Mushinski
Journal:  Oncogene       Date:  1989-05       Impact factor: 9.867

3.  DNA damage defines sites of recurrent chromosomal translocations in B lymphocytes.

Authors:  Ofir Hakim; Wolfgang Resch; Arito Yamane; Isaac Klein; Kyong-Rim Kieffer-Kwon; Mila Jankovic; Thiago Oliveira; Anne Bothmer; Ty C Voss; Camilo Ansarah-Sobrinho; Ewy Mathe; Genqing Liang; Jesse Cobell; Hirotaka Nakahashi; Davide F Robbiani; Andre Nussenzweig; Gordon L Hager; Michel C Nussenzweig; Rafael Casellas
Journal:  Nature       Date:  2012-02-07       Impact factor: 49.962

Review 4.  The pathogenesis of Burkitt's lymphoma.

Authors:  I Magrath
Journal:  Adv Cancer Res       Date:  1990       Impact factor: 6.242

5.  Patterns of chromosomal breakpoint locations in Burkitt's lymphoma: relevance to geography and Epstein-Barr virus association.

Authors:  B Shiramizu; F Barriga; J Neequaye; A Jafri; R Dalla-Favera; A Neri; M Guttierez; P Levine; I Magrath
Journal:  Blood       Date:  1991-04-01       Impact factor: 22.113

6.  Mechanism of endogenous myc gene down-regulation in E mu-N-myc tumors.

Authors:  A Ma; R K Smith; A Tesfaye; P Achacoso; R Dildrop; N Rosenberg; F W Alt
Journal:  Mol Cell Biol       Date:  1991-01       Impact factor: 4.272

7.  Variable breakpoints in Burkitt lymphoma cells with chromosomal t(8;14) translocation separate c-myc and the IgH locus up to several hundred kb.

Authors:  S Joos; M H Falk; P Lichter; F G Haluska; B Henglein; G M Lenoir; G W Bornkamm
Journal:  Hum Mol Genet       Date:  1992-11       Impact factor: 6.150

8.  Different regions of the immunoglobulin heavy-chain locus are involved in chromosomal translocations in distinct pathogenetic forms of Burkitt lymphoma.

Authors:  A Neri; F Barriga; D M Knowles; I T Magrath; R Dalla-Favera
Journal:  Proc Natl Acad Sci U S A       Date:  1988-04       Impact factor: 11.205

9.  Molecular epidemiology of Burkitt's lymphoma from South America: differences in breakpoint location and Epstein-Barr virus association from tumors in other world regions.

Authors:  M I Gutiérrez; K Bhatia; F Barriga; B Diez; F S Muriel; M L de Andreas; S Epelman; C Risueño; I T Magrath
Journal:  Blood       Date:  1992-06-15       Impact factor: 22.113

10.  Genome-wide translocation sequencing reveals mechanisms of chromosome breaks and rearrangements in B cells.

Authors:  Roberto Chiarle; Yu Zhang; Richard L Frock; Susanna M Lewis; Benoit Molinie; Yu-Jui Ho; Darienne R Myers; Vivian W Choi; Mara Compagno; Daniel J Malkin; Donna Neuberg; Stefano Monti; Cosmas C Giallourakis; Monica Gostissa; Frederick W Alt
Journal:  Cell       Date:  2011-09-30       Impact factor: 41.582

View more
  15 in total

Review 1.  Somatic Rearrangement in B Cells: It's (Mostly) Nuclear Physics.

Authors:  Erez Lieberman Aiden; Rafael Casellas
Journal:  Cell       Date:  2015-08-13       Impact factor: 41.582

2.  The Energetics and Physiological Impact of Cohesin Extrusion.

Authors:  Laura Vian; Aleksandra Pękowska; Suhas S P Rao; Kyong-Rim Kieffer-Kwon; Seolkyoung Jung; Laura Baranello; Su-Chen Huang; Laila El Khattabi; Marei Dose; Nathanael Pruett; Adrian L Sanborn; Andres Canela; Yaakov Maman; Anna Oksanen; Wolfgang Resch; Xingwang Li; Byoungkoo Lee; Alexander L Kovalchuk; Zhonghui Tang; Steevenson Nelson; Michele Di Pierro; Ryan R Cheng; Ido Machol; Brian Glenn St Hilaire; Neva C Durand; Muhammad S Shamim; Elena K Stamenova; José N Onuchic; Yijun Ruan; Andre Nussenzweig; David Levens; Erez Lieberman Aiden; Rafael Casellas
Journal:  Cell       Date:  2018-04-26       Impact factor: 41.582

Review 3.  Mutations, kataegis and translocations in B cells: understanding AID promiscuous activity.

Authors:  Rafael Casellas; Uttiya Basu; William T Yewdell; Jayanta Chaudhuri; Davide F Robbiani; Javier M Di Noia
Journal:  Nat Rev Immunol       Date:  2016-02-22       Impact factor: 53.106

4.  AID-associated DNA repair pathways regulate malignant transformation in a murine model of BCL6-driven diffuse large B-cell lymphoma.

Authors:  Xiwen Gu; Carmen J Booth; Zongzhi Liu; Matthew P Strout
Journal:  Blood       Date:  2015-09-18       Impact factor: 22.113

Review 5.  Complex correlations: replication timing and mutational landscapes during cancer and genome evolution.

Authors:  Jiao Sima; David M Gilbert
Journal:  Curr Opin Genet Dev       Date:  2014-03-02       Impact factor: 5.578

Review 6.  Mechanisms of human lymphoid chromosomal translocations.

Authors:  Michael R Lieber
Journal:  Nat Rev Cancer       Date:  2016-05-25       Impact factor: 60.716

Review 7.  Cellular MYCro economics: Balancing MYC function with MYC expression.

Authors:  David Levens
Journal:  Cold Spring Harb Perspect Med       Date:  2013-11-01       Impact factor: 6.915

Review 8.  Epigenetic Regulation of Individual Modules of the immunoglobulin heavy chain locus 3' Regulatory Region.

Authors:  Barbara K Birshtein
Journal:  Front Immunol       Date:  2014-04-21       Impact factor: 7.561

9.  B cell super-enhancers and regulatory clusters recruit AID tumorigenic activity.

Authors:  Jason Qian; Qiao Wang; Marei Dose; Nathanael Pruett; Kyong-Rim Kieffer-Kwon; Wolfgang Resch; Genqing Liang; Zhonghui Tang; Ewy Mathé; Christopher Benner; Wendy Dubois; Steevenson Nelson; Laura Vian; Thiago Y Oliveira; Mila Jankovic; Ofir Hakim; Anna Gazumyan; Rushad Pavri; Parirokh Awasthi; Bin Song; Geng Liu; Longyun Chen; Shida Zhu; Lionel Feigenbaum; Louis Staudt; Cornelis Murre; Yijun Ruan; Davide F Robbiani; Qiang Pan-Hammarström; Michel C Nussenzweig; Rafael Casellas
Journal:  Cell       Date:  2014-12-04       Impact factor: 41.582

10.  HMGN proteins modulate chromatin regulatory sites and gene expression during activation of naïve B cells.

Authors:  Shaofei Zhang; Iris Zhu; Tao Deng; Takashi Furusawa; Mark Rochman; Melanie S Vacchio; Remy Bosselut; Arito Yamane; Rafael Casellas; David Landsman; Michael Bustin
Journal:  Nucleic Acids Res       Date:  2016-04-25       Impact factor: 16.971

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.