Literature DB >> 22707144

Characterization and functional analysis of the genes encoding 1-deoxy-D-xylulose-5-phosphate reductoisomerase and 1-deoxy-D-xylulose-5-phosphate synthase, the two enzymes in the MEP pathway, from Amomum villosum Lour.

Jinfen Yang1, Megha Nath Adhikari, Hui Liu, Hui Xu, Guozhen He, Ruoting Zhan, Jieshu Wei, Weiwen Chen.   

Abstract

A DXR gene, AvDXR (GenBank accession no. FJ459894), and a DXS gene, AvDXS (GenBank accession no. FJ455512), were isolated from the leaves of Amomum villosum, one of the most well-known and authentic herbs in South China. The 1,749-bp full-length cDNA of AvDXR encoded a peptide of 472 amino acids, and the 2,347-bp full-length cDNA of AvDXS encoded a peptide of 715 amino acids. The deduced amino acid sequences of the AvDXR and AvDXS proteins share high homology with DXRs and DXSs from other plant species, and AvDXS belongs to class 1 plant DXS. The characterization based on bioinformatic analysis indicated that the AvDXR and AvDXS encoded functional proteins as DXR and DXS, respectively. The functional color assay in Escherichia coli with pAC-BETA implied that AvDXR and AvDXS encoded functional proteins that manipulated the biosynthesis of isoprenoid precursors. Both AvDXR and AvDXS were expressed extensively in the leaves, stems, roots, pericarps and seeds of A. villosum. AvDXS expression was similar in all tissues investigated, whereas higher levels of AvDXR were observed in the fruits, the main part for the accumulation of volatile oil in this plant. AvDXR was transformed into tobacco to confirm its function further. Overexpression of AvDXR in transgenic T1 generation tobacco increased DXR activity, photosynthetic pigment content and volatile isoprenoid components, and the increase of photosynthetic pigment content was consistent with the AvDXR transcription level. This study demonstrated that AvDXR plays important role in isoprenoid biosynthesis and it is useful for metabolic engineering.

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Year:  2012        PMID: 22707144     DOI: 10.1007/s11033-012-1676-y

Source DB:  PubMed          Journal:  Mol Biol Rep        ISSN: 0301-4851            Impact factor:   2.316


  37 in total

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Journal:  Nat Prod Rep       Date:  1999-10       Impact factor: 13.423

Review 2.  Deoxyxylulose phosphate pathway to terpenoids.

Authors:  W Eisenreich; F Rohdich; A Bacher
Journal:  Trends Plant Sci       Date:  2001-02       Impact factor: 18.313

3.  Analysis of the expression of CLA1, a gene that encodes the 1-deoxyxylulose 5-phosphate synthase of the 2-C-methyl-D-erythritol-4-phosphate pathway in Arabidopsis.

Authors:  J M Estévez; A Cantero; C Romero; H Kawaide; L F Jiménez; T Kuzuyama; H Seto; Y Kamiya; P León
Journal:  Plant Physiol       Date:  2000-09       Impact factor: 8.340

4.  Metabolic engineering of essential oil yield and composition in mint by altering expression of deoxyxylulose phosphate reductoisomerase and menthofuran synthase.

Authors:  S S Mahmoud; R B Croteau
Journal:  Proc Natl Acad Sci U S A       Date:  2001-06-26       Impact factor: 11.205

5.  Carotenoid biosynthesis during tomato fruit development: regulatory role of 1-deoxy-D-xylulose 5-phosphate synthase.

Authors:  L M Lois; M Rodríguez-Concepción; F Gallego; N Campos; A Boronat
Journal:  Plant J       Date:  2000-06       Impact factor: 6.417

6.  Expression and molecular analysis of the Arabidopsis DXR gene encoding 1-deoxy-D-xylulose 5-phosphate reductoisomerase, the first committed enzyme of the 2-C-methyl-D-erythritol 4-phosphate pathway.

Authors:  Lorenzo Carretero-Paulet; Iván Ahumada; Nuria Cunillera; Manuel Rodríguez-Concepción; Albert Ferrer; Albert Boronat; Narciso Campos
Journal:  Plant Physiol       Date:  2002-08       Impact factor: 8.340

7.  A 1-deoxy-D-xylulose 5-phosphate reductoisomerase catalyzing the formation of 2-C-methyl-D-erythritol 4-phosphate in an alternative nonmevalonate pathway for terpenoid biosynthesis.

Authors:  S Takahashi; T Kuzuyama; H Watanabe; H Seto
Journal:  Proc Natl Acad Sci U S A       Date:  1998-08-18       Impact factor: 11.205

8.  Biosynthesis of isoprenoids (carotenoids, sterols, prenyl side-chains of chlorophylls and plastoquinone) via a novel pyruvate/glyceraldehyde 3-phosphate non-mevalonate pathway in the green alga Scenedesmus obliquus.

Authors:  J Schwender; M Seemann; H K Lichtenthaler; M Rohmer
Journal:  Biochem J       Date:  1996-05-15       Impact factor: 3.857

9.  THE 1-DEOXY-D-XYLULOSE-5-PHOSPHATE PATHWAY OF ISOPRENOID BIOSYNTHESIS IN PLANTS.

Authors:  Hartmut K. Lichtenthaler
Journal:  Annu Rev Plant Physiol Plant Mol Biol       Date:  1999-06

10.  Overexpression of 1-Deoxy-D-xylulose-5-phosphate reductoisomerase gene in chloroplast contributes to increment of isoprenoid production.

Authors:  Tomohisa Hasunuma; Shinya Takeno; Shunsuke Hayashi; Mayumi Sendai; Takeshi Bamba; Satomi Yoshimura; Ken-Ichi Tomizawa; Eiichiro Fukusaki; Chikahiro Miyake
Journal:  J Biosci Bioeng       Date:  2008-05       Impact factor: 2.894

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  10 in total

1.  In silico characterization and differential expression analysis of 1-deoxy-d-xylulose-5-phosphate reductoisomerase (DXR) of Centella asiatica.

Authors:  Richa Sharma; Kamalakshi Devi; Mahendra K Modi; Priyabrata Sen
Journal:  3 Biotech       Date:  2021-03-22       Impact factor: 2.406

2.  Molecular Cloning and Characterization of DXS and DXR Genes in the Terpenoid Biosynthetic Pathway of Tripterygium wilfordii.

Authors:  Yuru Tong; Ping Su; Yujun Zhao; Meng Zhang; Xiujuan Wang; Yujia Liu; Xianan Zhang; Wei Gao; Luqi Huang
Journal:  Int J Mol Sci       Date:  2015-10-23       Impact factor: 5.923

3.  Differential Contribution of the First Two Enzymes of the MEP Pathway to the Supply of Metabolic Precursors for Carotenoid and Chlorophyll Biosynthesis in Carrot (Daucus carota).

Authors:  Kevin Simpson; Luis F Quiroz; Manuel Rodriguez-Concepción; Claudia R Stange
Journal:  Front Plant Sci       Date:  2016-08-31       Impact factor: 5.753

4.  Transcriptome Sequencing Analysis Reveals a Difference in Monoterpene Biosynthesis between Scented Lilium 'Siberia' and Unscented Lilium 'Novano'.

Authors:  Zenghui Hu; Biao Tang; Qi Wu; Jian Zheng; Pingsheng Leng; Kezhong Zhang
Journal:  Front Plant Sci       Date:  2017-08-04       Impact factor: 5.753

5.  An Integrative Volatile Terpenoid Profiling and Transcriptomics Analysis for Gene Mining and Functional Characterization of AvBPPS and AvPS Involved in the Monoterpenoid Biosynthesis in Amomum villosum.

Authors:  Hong Wang; Dongming Ma; Jinfen Yang; Ke Deng; Meng Li; Xiaoyu Ji; Liting Zhong; Haiying Zhao
Journal:  Front Plant Sci       Date:  2018-06-20       Impact factor: 5.753

6.  Molecular Cloning and Functional Analysis of 1-Deoxy-D-Xylulose 5-Phosphate Reductoisomerase from Santalum album.

Authors:  Yueya Zhang; Haifeng Yan; Yuan Li; Yuping Xiong; Meiyun Niu; Xinhua Zhang; Jaime A Teixeira da Silva; Guohua Ma
Journal:  Genes (Basel)       Date:  2021-04-22       Impact factor: 4.096

7.  Characterization of a functionally active recombinant 1-deoxy-D-xylulose-5-phosphate synthase from Babesia bovis.

Authors:  Jing Wang; You-Ming Shen; Bing Li; Xu-zheng Zhou; Cui-cui Liu; Ji-yu Zhang
Journal:  J Vet Med Sci       Date:  2014-04-16       Impact factor: 1.267

8.  Differential Subplastidial Localization and Turnover of Enzymes Involved in Isoprenoid Biosynthesis in Chloroplasts.

Authors:  Catalina Perello; Ernesto Llamas; Vincent Burlat; Miriam Ortiz-Alcaide; Michael A Phillips; Pablo Pulido; Manuel Rodriguez-Concepcion
Journal:  PLoS One       Date:  2016-02-26       Impact factor: 3.752

9.  The organ-specific differential roles of rice DXS and DXR, the first two enzymes of the MEP pathway, in carotenoid metabolism in Oryza sativa leaves and seeds.

Authors:  M K You; Y J Lee; J K Kim; S A Baek; Y A Jeon; S H Lim; S H Ha
Journal:  BMC Plant Biol       Date:  2020-04-15       Impact factor: 4.215

10.  Molecular Cloning and Differential Gene Expression Analysis of 1-Deoxy-D-xylulose 5-Phosphate Synthase (DXS) in Andrographis paniculata (Burm. f) Nees.

Authors:  Mote Srinath; Aayeti Shailaja; Byreddi Bhavani Venkata Bindu; Charu Chandra Giri
Journal:  Mol Biotechnol       Date:  2020-11-22       Impact factor: 2.695

  10 in total

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