Literature DB >> 22702641

A signal detection method to detect adverse drug reactions using a parametric time-to-event model in simulated cohort data.

Victoria R Cornelius1, Odile Sauzet, Stephen J W Evans.   

Abstract

BACKGROUND: Current quantitative signal detection methods have been primarily developed for the purpose of detecting signals from spontaneous reports. These methods are not always appropriate for cohort data. More recently, parametric time-to-event models have been proposed to model hazard functions with the ultimate aim of detecting adverse drug reactions (ADRs). The rate of occurrence of ADRs after starting a drug will depend upon the causal mechanism and therefore will often vary with time, in contrast to events not associated with the drug, which will tend to occur at a constant background rate. After starting treatment, the onset of ADRs will be rapid for some but delayed for others. A non-constant rate over time may indicate a drug-event relationship.
OBJECTIVE: The aim of this study was to propose a simple test to detect signals of ADRs in cohort data and to investigate the power of this test using simulated data. A signal detection tool using the proposed test to improve the power of detection is also described.
METHOD: In order to test for a non-constant hazard (rate of occurrence), the hazard function was estimated using the model shape parameter for the Weibull function. If the shape parameter was found to be significantly different (p < 0.05) from the value one (the value for a constant hazard) a signal was raised. Simulation of background event rates used were 1%, 5% and 10% of the cohort size. The ADR rate was varied in proportion to the background rate; a 10%, 20% and 50% increase in the background rate was explored. The time of occurrence of the ADR will dictate the shape of the hazard function, therefore the ability of the model to detect a signal depending when the highest risk for ADR was also explored. The power of the test was investigated by simulation.
RESULTS: The Weibull Shape Parameter (WSP) test was most powerful at detecting signals that occur shortly after starting treatment. These preliminary simulations had low power when the underlying hazard function was symmetrical (e.g. when ADRs occurred in the middle of the study period). The power of the test was improved by censoring the data as this broke the symmetry of the hazard function. A tool that censored the data at regular intervals and repeated the WSP test was found to correctly detect ADR or no ADR around 90% of the time when the sample size was at least 5000.
CONCLUSION: The WSP test is simple to implement using standard statistical software, and can be used to detect non-constant hazards over time in order to raise signals of time-dependent ADRs. When there is no pre-specified event of interest or the time of the ADR is uncertain, the WSP tool should be used instead of the WSP test. These methods do not require any external data for comparative purposes and thus can be implemented in a single cohort of participants exposed to a drug.

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Year:  2012        PMID: 22702641     DOI: 10.2165/11599740-000000000-00000

Source DB:  PubMed          Journal:  Drug Saf        ISSN: 0114-5916            Impact factor:   5.606


  7 in total

1.  Combining electronic healthcare databases in Europe to allow for large-scale drug safety monitoring: the EU-ADR Project.

Authors:  Preciosa M Coloma; Martijn J Schuemie; Gianluca Trifirò; Rosa Gini; Ron Herings; Julia Hippisley-Cox; Giampiero Mazzaglia; Carlo Giaquinto; Giovanni Corrao; Lars Pedersen; Johan van der Lei; Miriam Sturkenboom
Journal:  Pharmacoepidemiol Drug Saf       Date:  2010-11-08       Impact factor: 2.890

2.  Methods for drug safety signal detection in longitudinal observational databases: LGPS and LEOPARD.

Authors:  Martijn J Schuemie
Journal:  Pharmacoepidemiol Drug Saf       Date:  2010-10-13       Impact factor: 2.890

Review 3.  Data mining for signals in spontaneous reporting databases: proceed with caution.

Authors:  Wendy P Stephenson; Manfred Hauben
Journal:  Pharmacoepidemiol Drug Saf       Date:  2007-04       Impact factor: 2.890

Review 4.  Quantitative signal detection using spontaneous ADR reporting.

Authors:  A Bate; S J W Evans
Journal:  Pharmacoepidemiol Drug Saf       Date:  2009-06       Impact factor: 2.890

Review 5.  Limitations and strengths of spontaneous reports data.

Authors:  S A Goldman
Journal:  Clin Ther       Date:  1998       Impact factor: 3.393

6.  Modelling the time to onset of adverse reactions with parametric survival distributions: a potential approach to signal detection and evaluation.

Authors:  François Maignen; Manfred Hauben; Panos Tsintis
Journal:  Drug Saf       Date:  2010-05-01       Impact factor: 5.606

7.  Longitudinal monitoring of the safety of drugs by using a web-based system: the case of pregabalin.

Authors:  Linda Härmark; Eugene Puijenbroek; Kees Grootheest
Journal:  Pharmacoepidemiol Drug Saf       Date:  2011-06       Impact factor: 2.890

  7 in total
  10 in total

1.  Neuropsychiatric events with varenicline: a modified prescription-event monitoring study in general practice in England.

Authors:  Yvonne Buggy; Victoria Cornelius; Carole Fogg; Rachna Kasliwal; Deborah Layton; Saad A W Shakir
Journal:  Drug Saf       Date:  2013-07       Impact factor: 5.606

2.  Spontaneous and Immune Checkpoint Inhibitor-Induced Autoimmune Diseases: Analysis of Temporal Information by Using the Japanese Adverse Drug Event Report Database.

Authors:  Keiko Ogawa; Yoshihiro Kozuka; Hitomi Uno; Kosuke Utsumi; Osamu Noyori; Rumiko Hosoki
Journal:  Clin Drug Investig       Date:  2021-06-10       Impact factor: 2.859

3.  Thromboembolic adverse event study of combined estrogen-progestin preparations using Japanese Adverse Drug Event Report database.

Authors:  Shiori Hasegawa; Toshinobu Matsui; Yuuki Hane; Junko Abe; Haruna Hatahira; Yumi Motooka; Sayaka Sasaoka; Akiho Fukuda; Misa Naganuma; Kouseki Hirade; Yukiko Takahashi; Yasutomi Kinosada; Mitsuhiro Nakamura
Journal:  PLoS One       Date:  2017-07-21       Impact factor: 3.240

4.  Time to onset in statistical signal detection revisited: A follow-up study in long-term onset adverse drug reactions.

Authors:  Joep H G Scholl; Florence P A M van Hunsel; Eelko Hak; Eugène P van Puijenbroek
Journal:  Pharmacoepidemiol Drug Saf       Date:  2019-06-12       Impact factor: 2.890

5.  Finding the right hazard function for time-to-event modeling: A tutorial and Shiny application.

Authors:  Rob C Van Wijk; Ulrika S H Simonsson
Journal:  CPT Pharmacometrics Syst Pharmacol       Date:  2022-04-28

6.  Generalised weibull model-based approaches to detect non-constant hazard to signal adverse drug reactions in longitudinal data.

Authors:  Odile Sauzet; Victoria Cornelius
Journal:  Front Pharmacol       Date:  2022-08-23       Impact factor: 5.988

7.  Illustration of the weibull shape parameter signal detection tool using electronic healthcare record data.

Authors:  Odile Sauzet; Alfonso Carvajal; Antonio Escudero; Mariam Molokhia; Victoria R Cornelius
Journal:  Drug Saf       Date:  2013-10       Impact factor: 5.606

8.  Estimating time-to-onset of adverse drug reactions from spontaneous reporting databases.

Authors:  Fanny Leroy; Jean-Yves Dauxois; Hélène Théophile; Françoise Haramburu; Pascale Tubert-Bitter
Journal:  BMC Med Res Methodol       Date:  2014-02-03       Impact factor: 4.615

9.  Analysis of Stevens-Johnson syndrome and toxic epidermal necrolysis using the Japanese Adverse Drug Event Report database.

Authors:  Junko Abe; Ryogo Umetsu; Kanako Mataki; Yamato Kato; Natsumi Ueda; Yoko Nakayama; Yuuki Hane; Toshinobu Matsui; Haruna Hatahira; Sayaka Sasaoka; Yumi Motooka; Hideaki Hara; Zenichiro Kato; Yasutomi Kinosada; Naoki Inagaki; Mitsuhiro Nakamura
Journal:  J Pharm Health Care Sci       Date:  2016-06-21

10.  Analysis of the time-to-onset of osteonecrosis of jaw with bisphosphonate treatment using the data from a spontaneous reporting system of adverse drug events.

Authors:  Mitsuhiro Nakamura; Ryogo Umetsu; Junko Abe; Toshinobu Matsui; Natsumi Ueda; Yamato Kato; Sayaka Sasaoka; Kohei Tahara; Hirofumi Takeuchi; Yasutomi Kinosada
Journal:  J Pharm Health Care Sci       Date:  2015-12-22
  10 in total

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