Literature DB >> 22700978

Thematic minireview series on circular proteins.

David J Craik1, Norma M Allewell.   

Abstract

Circular proteins have now been discovered in all kingdoms of life and are characterized by their exceptional stability and the diversity of their biological activities, primarily in the realm of host defense functions. This thematic minireview series provides an overview of the distribution, evolution, activities, and biological synthesis of circular proteins. It also reviews approaches that biological chemists are taking to develop synthetic methods for making circular proteins in the laboratory. These approaches include solid-phase peptide synthesis based on an adaption of native chemical ligation technology and recombinant DNA approaches that are amenable to the in-cell production of cyclic peptide libraries. The thioester-mediated native chemical ligation approach mimics, to some extent, elements of the natural biosynthetic reaction, which, for disulfide-rich cyclic peptides, appears to involve asparaginyl endopeptidase-mediated processing from larger precursor proteins.

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Year:  2012        PMID: 22700978      PMCID: PMC3411035          DOI: 10.1074/jbc.R112.390344

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  7 in total

1.  Chemistry. Seamless proteins tie up their loose ends.

Authors:  David J Craik
Journal:  Science       Date:  2006-03-17       Impact factor: 47.728

2.  An asparaginyl endopeptidase mediates in vivo protein backbone cyclization.

Authors:  Ivana Saska; Amanda D Gillon; Noriyuki Hatsugai; Ralf G Dietzgen; Ikuko Hara-Nishimura; Marilyn A Anderson; David J Craik
Journal:  J Biol Chem       Date:  2007-08-13       Impact factor: 5.157

Review 3.  Structure and genetics of circular bacteriocins.

Authors:  Marco J van Belkum; Leah A Martin-Visscher; John C Vederas
Journal:  Trends Microbiol       Date:  2011-06-12       Impact factor: 17.079

4.  Albumins and their processing machinery are hijacked for cyclic peptides in sunflower.

Authors:  Joshua S Mylne; Michelle L Colgrave; Norelle L Daly; Aurelie H Chanson; Alysha G Elliott; Emily J McCallum; Alun Jones; David J Craik
Journal:  Nat Chem Biol       Date:  2011-03-20       Impact factor: 15.040

Review 5.  AS-48 bacteriocin: close to perfection.

Authors:  Marina Sánchez-Hidalgo; Manuel Montalbán-López; Rubén Cebrián; Eva Valdivia; Manuel Martínez-Bueno; Mercedes Maqueda
Journal:  Cell Mol Life Sci       Date:  2011-05-17       Impact factor: 9.261

6.  The biosynthesis of Caryophyllaceae-like cyclic peptides in Saponaria vaccaria L. from DNA-encoded precursors.

Authors:  Janet A Condie; Goska Nowak; Darwin W Reed; J John Balsevich; Martin J T Reaney; Paul G Arnison; Patrick S Covello
Journal:  Plant J       Date:  2011-06-10       Impact factor: 6.417

7.  Synthesis of proteins by native chemical ligation.

Authors:  P E Dawson; T W Muir; I Clark-Lewis; S B Kent
Journal:  Science       Date:  1994-11-04       Impact factor: 47.728

  7 in total
  7 in total

Review 1.  Novel protein science enabled by total chemical synthesis.

Authors:  Stephen B H Kent
Journal:  Protein Sci       Date:  2018-12-18       Impact factor: 6.725

2.  Peptide macrocyclization catalyzed by a prolyl oligopeptidase involved in α-amanitin biosynthesis.

Authors:  Hong Luo; Sung-Yong Hong; R Michael Sgambelluri; Evan Angelos; Xuan Li; Jonathan D Walton
Journal:  Chem Biol       Date:  2014-12-04

3.  Secretion of circular proteins using sortase.

Authors:  Karin Strijbis; Hidde L Ploegh
Journal:  Methods Mol Biol       Date:  2014

4.  Circular sequence comparison: algorithms and applications.

Authors:  Roberto Grossi; Costas S Iliopoulos; Robert Mercas; Nadia Pisanti; Solon P Pissis; Ahmad Retha; Fatima Vayani
Journal:  Algorithms Mol Biol       Date:  2016-05-10       Impact factor: 1.405

5.  libFLASM: a software library for fixed-length approximate string matching.

Authors:  Lorraine A K Ayad; Solon P P Pissis; Ahmad Retha
Journal:  BMC Bioinformatics       Date:  2016-11-10       Impact factor: 3.169

6.  MARS: improving multiple circular sequence alignment using refined sequences.

Authors:  Lorraine A K Ayad; Solon P Pissis
Journal:  BMC Genomics       Date:  2017-01-14       Impact factor: 3.969

7.  Pierced Lasso Bundles are a new class of knot-like motifs.

Authors:  Ellinor Haglund; Joanna I Sulkowska; Jeffrey K Noel; Heiko Lammert; José N Onuchic; Patricia A Jennings
Journal:  PLoS Comput Biol       Date:  2014-06-19       Impact factor: 4.475

  7 in total

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