Literature DB >> 22699509

Presence of tannins in sorghum grains is conditioned by different natural alleles of Tannin1.

Yuye Wu1, Xianran Li, Wenwen Xiang, Chengsong Zhu, Zhongwei Lin, Yun Wu, Jiarui Li, Satchidanand Pandravada, Dustan D Ridder, Guihua Bai, Ming L Wang, Harold N Trick, Scott R Bean, Mitchell R Tuinstra, Tesfaye T Tesso, Jianming Yu.   

Abstract

Sorghum, an ancient old-world cereal grass, is the dietary staple of over 500 million people in more than 30 countries in the tropics and semitropics. Its C4 photosynthesis, drought resistance, wide adaptation, and high nutritional value hold the promise to alleviate hunger in Africa. Not present in other major cereals, such as rice, wheat, and maize, condensed tannins (proanthocyanidins) in the pigmented testa of some sorghum cultivars have been implicated in reducing protein digestibility but recently have been shown to promote human health because of their high antioxidant capacity and ability to fight obesity through reduced digestion. Combining quantitative trait locus mapping, meta-quantitative trait locus fine-mapping, and association mapping, we showed that the nucleotide polymorphisms in the Tan1 gene, coding a WD40 protein, control the tannin biosynthesis in sorghum. A 1-bp G deletion in the coding region, causing a frame shift and a premature stop codon, led to a nonfunctional allele, tan1-a. Likewise, a different 10-bp insertion resulted in a second nonfunctional allele, tan1-b. Transforming the sorghum Tan1 ORF into a nontannin Arabidopsis mutant restored the tannin phenotype. In addition, reduction in nucleotide diversity from wild sorghum accessions to landraces and cultivars was found at the region that codes the highly conserved WD40 repeat domains and the C-terminal region of the protein. Genetic research in crops, coupled with nutritional and medical research, could open the possibility of producing different levels and combinations of phenolic compounds to promote human health.

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Year:  2012        PMID: 22699509      PMCID: PMC3387071          DOI: 10.1073/pnas.1201700109

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  26 in total

1.  Quantitative trait loci: a meta-analysis.

Authors:  B Goffinet; S Gerber
Journal:  Genetics       Date:  2000-05       Impact factor: 4.562

2.  Caught red-handed: Rc encodes a basic helix-loop-helix protein conditioning red pericarp in rice.

Authors:  Megan T Sweeney; Michael J Thomson; Bernard E Pfeil; Susan McCouch
Journal:  Plant Cell       Date:  2006-01-06       Impact factor: 11.277

Review 3.  Dietary phenolics: chemistry, bioavailability and effects on health.

Authors:  Alan Crozier; Indu B Jaganath; Michael N Clifford
Journal:  Nat Prod Rep       Date:  2009-05-13       Impact factor: 13.423

Review 4.  The molecular genetics of crop domestication.

Authors:  John F Doebley; Brandon S Gaut; Bruce D Smith
Journal:  Cell       Date:  2006-12-29       Impact factor: 41.582

5.  The TRANSPARENT TESTA GLABRA1 locus, which regulates trichome differentiation and anthocyanin biosynthesis in Arabidopsis, encodes a WD40 repeat protein.

Authors:  A R Walker; P A Davison; A C Bolognesi-Winfield; C M James; N Srinivasan; T L Blundell; J J Esch; M D Marks; J C Gray
Journal:  Plant Cell       Date:  1999-07       Impact factor: 11.277

6.  Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana.

Authors:  S J Clough; A F Bent
Journal:  Plant J       Date:  1998-12       Impact factor: 6.417

Review 7.  Sorghum phytochemicals and their potential impact on human health.

Authors:  Joseph M Awika; Lloyd W Rooney
Journal:  Phytochemistry       Date:  2004-05       Impact factor: 4.072

8.  Mutations in the pale aleurone color1 regulatory gene of the Zea mays anthocyanin pathway have distinct phenotypes relative to the functionally similar TRANSPARENT TESTA GLABRA1 gene in Arabidopsis thaliana.

Authors:  Charles C Carey; Josie T Strahle; David A Selinger; Vicki L Chandler
Journal:  Plant Cell       Date:  2004-01-23       Impact factor: 11.277

Review 9.  Biosynthesis and genetic regulation of proanthocyanidins in plants.

Authors:  Fei He; Qiu-Hong Pan; Ying Shi; Chang-Qing Duan
Journal:  Molecules       Date:  2008-10-28       Impact factor: 4.411

10.  MetaQTL: a package of new computational methods for the meta-analysis of QTL mapping experiments.

Authors:  Jean-Baptiste Veyrieras; Bruno Goffinet; Alain Charcosset
Journal:  BMC Bioinformatics       Date:  2007-02-08       Impact factor: 3.169

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  36 in total

1.  Nutrient content of sorghum hybrid lines between Gadam and hard coat tannin sorghum cultivars.

Authors:  Cecilia A Shinda; Paul N Nthakanio; Josiah N Gitari; Steven Runo; Simon Mukono; Samuel Maina
Journal:  Food Sci Nutr       Date:  2022-03-21       Impact factor: 3.553

2.  Genome-wide association analysis reveals seed protein loci as determinants of variations in grain mold resistance in sorghum.

Authors:  Habte Nida; Gezahegn Girma; Moges Mekonen; Alemu Tirfessa; Amare Seyoum; Tamirat Bejiga; Chemeda Birhanu; Kebede Dessalegn; Tsegau Senbetay; Getachew Ayana; Tesfaye Tesso; Gebisa Ejeta; Tesfaye Mengiste
Journal:  Theor Appl Genet       Date:  2021-01-16       Impact factor: 5.699

3.  Genetic analysis of inflorescence and plant height components in sorghum (Panicoidae) and comparative genetics with rice (Oryzoidae).

Authors:  Dong Zhang; Wenqian Kong; Jon Robertson; Valorie H Goff; Ethan Epps; Alexandra Kerr; Gabriel Mills; Jay Cromwell; Yelena Lugin; Christine Phillips; Andrew H Paterson
Journal:  BMC Plant Biol       Date:  2015-04-19       Impact factor: 4.215

4.  Multiparental mapping of plant height and flowering time QTL in partially isogenic sorghum families.

Authors:  R H Higgins; C S Thurber; I Assaranurak; P J Brown
Journal:  G3 (Bethesda)       Date:  2014-09-18       Impact factor: 3.154

5.  Expression level of a flavonoid 3'-hydroxylase gene determines pathogen-induced color variation in sorghum.

Authors:  Hiroshi Mizuno; Takayuki Yazawa; Shigemitsu Kasuga; Yuji Sawada; Jun Ogata; Tsuyu Ando; Hiroyuki Kanamori; Jun-ichi Yonemaru; Jianzhong Wu; Masami Yokota Hirai; Takashi Matsumoto; Hiroyuki Kawahigashi
Journal:  BMC Res Notes       Date:  2014-10-27

Review 6.  Genetic divergence in transcriptional regulators of defense metabolism: insight into plant domestication and improvement.

Authors:  Tsubasa Shoji; Naoyuki Umemoto; Kazuki Saito
Journal:  Plant Mol Biol       Date:  2021-06-10       Impact factor: 4.076

7.  Genome-environment associations in sorghum landraces predict adaptive traits.

Authors:  Jesse R Lasky; Hari D Upadhyaya; Punna Ramu; Santosh Deshpande; C Tom Hash; Jason Bonnette; Thomas E Juenger; Katie Hyma; Charlotte Acharya; Sharon E Mitchell; Edward S Buckler; Zachary Brenton; Stephen Kresovich; Geoffrey P Morris
Journal:  Sci Adv       Date:  2015-07-03       Impact factor: 14.136

8.  Crop plants as models for understanding plant adaptation and diversification.

Authors:  Kenneth M Olsen; Jonathan F Wendel
Journal:  Front Plant Sci       Date:  2013-08-01       Impact factor: 5.753

9.  Dissecting genome-wide association signals for loss-of-function phenotypes in sorghum flavonoid pigmentation traits.

Authors:  Geoffrey P Morris; Davina H Rhodes; Zachary Brenton; Punna Ramu; Vinayan Madhumal Thayil; Santosh Deshpande; C Thomas Hash; Charlotte Acharya; Sharon E Mitchell; Edward S Buckler; Jianming Yu; Stephen Kresovich
Journal:  G3 (Bethesda)       Date:  2013-11-06       Impact factor: 3.154

10.  The Sorghum Gene for Leaf Color Changes upon Wounding (P) Encodes a Flavanone 4-Reductase in the 3-Deoxyanthocyanidin Biosynthesis Pathway.

Authors:  Hiroyuki Kawahigashi; Shigemitsu Kasuga; Yuji Sawada; Jun-Ichi Yonemaru; Tsuyu Ando; Hiroyuki Kanamori; Jianzhong Wu; Hiroshi Mizuno; Mitsuru Momma; Zui Fujimoto; Masami Yokota Hirai; Takashi Matsumoto
Journal:  G3 (Bethesda)       Date:  2016-05-03       Impact factor: 3.154

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