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Literature DB >> 22698062

Multicolor super-resolution DNA imaging for genetic analysis.

Murat Baday¹, Aaron Cravens, Alex Hastie, Hyeongjun Kim, Deren E Kudeki, Pui-Yan Kwok, Ming Xiao, Paul R Selvin.

Abstract

Many types of cancer and neurodegenerative diseases are caused by abnormalities and variations in the genome. We have designed a high-resolution imaging technique with high throughput and low cost for determining structural variations of genes related to genetic diseases. We initially mapped all seven nicking sites of Nb.BbvCI endonuclease enzyme on lambda DNA. Then we resolved densely labeled patterns of 107 nicking sites on human BAC DNA that is digested by Nb.BsmI and Nb.BbvCI endonuclease enzymes. This high density resulted in several dyes being closer together than the diffraction limit. Overall, detailed DNA nicking sites mapping with 100 bp resolution was achieved, which has the potential to reveal information about genetic variance and to facilitate medical diagnosis of several genetic diseases.

Entities: Chemical Disease Species

Mesh：

Substances：
DNA
Endonucleases

Year: 2012 PMID： 22698062 PMCID： PMC3880789 DOI： 10.1021/nl302069q

Source DB: PubMed Journal: Nano Lett ISSN： 1530-6984 Impact factor: 11.189

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