| Literature DB >> 22695063 |
Bernhard T Baune1, Carsten Konrad, Dominik Grotegerd, Thomas Suslow, Eva Birosova, Patricia Ohrmann, Jochen Bauer, Volker Arolt, Walter Heindel, Katharina Domschke, Sonja Schöning, Astrid V Rauch, Christina Uhlmann, Harald Kugel, Udo Dannlowski.
Abstract
BACKGROUND: Cytokines such as interleukin 6 (IL-6) have been implicated in dual functions in neuropsychiatric disorders. Little is known about the genetic predisposition to neurodegenerative and neuroproliferative properties of cytokine genes. In this study the potential dual role of several IL-6 polymorphisms in brain morphology is investigated.Entities:
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Year: 2012 PMID: 22695063 PMCID: PMC3464888 DOI: 10.1186/1742-2094-9-125
Source DB: PubMed Journal: J Neuroinflammation ISSN: 1742-2094 Impact factor: 8.322
Selection of single nucleotide polymorphisms withingene
| chr7: 22,731,750-22,738,790 | 43 | 22 | 0.991 | rs1800795 | 22733170 | 5' near gene | CG | 0.467 (G) | 8 | 97.08% | |
| rs1800796 | 22732771 | 5' near gene | CG | 0.043 (C) | 3 | ||||||
| rs2069833 | 22734189 | intron | CT | 0.475 (T) | 8 | ||||||
| rs2069840 | 22735097 | intron | CG | 0.317 (G) | 1 |
SNP, single nucleotide polymorphism; MAF, minor allele frequency; r2, linkage disequilibrium statistic [49]. MAF data relates CEU population from HapMap Phase II + III [50].
Sample characteristics dependent on-174 C/G genotype
| CC ( | CG ( | GG ( | p-value, according to χ²-test (df = 2) or ANOVA (F2,290) | |
|---|---|---|---|---|
| Age | 34.6 ± 12.3 | 34.0 ± 12.3 | 31.8 ± 10.4 | 0.25 |
| Sex (m/f) | 19/24 | 61/89 | 42/58 | 0.92 |
| Verbal IQ1 | 119.1 ± 13.8 | 118.3 ± 12.1 | 118.1 ± 11.9 | 0.92 |
| Education years | 15.0 ± 2.4 | 14.8 ± 2.1 | 14.7 ± 2.1 | 0.82 |
| STAI trait2 | 31.0 ± 6.7 | 32.8 ± 6.3 | 32.3 ± 6.8 | 0.32 |
| BDI | 2.2 ± 3.0 | 2.3 ± 2.7 | 2.4 ± 2.9 | 0.93 |
1Assessed with the Mehrfachwahl-Wortschatz test (multiple-choice vocabulary test; Lehrl, 1995), data from N = 230 subjects available. 2 State-Trait Anxiety Inventory, data from N = 258 subjects available. 3 Beck Depression Inventory, data from N = 283 subjects available.
Figure 1Effect ofrs1800795 (−174 C/G) genotype on brain morphometry.Left panel: Sagittal view through the right hippocampus (x = 24) depicting gray matter volume significantly modulated by the IL-6 -174 C/G genotype, thresholded at p < 0.005, k = 340 (corresponding to p < 0.05, corrected on the cluster level for the entire brain), adjusted for age, education and gender. Color bar, F-value (df = 2,286); Right panel: Bar graph depicting gray matter concentration at x = 21, y = −12, z = −15 dependent on IL-6 -174 C/G genotype