| Literature DB >> 22694772 |
Djillali Annane1, Jean Paul Mira, Lorraine B Ware, Anthony C Gordon, Jonathan Sevransky, Frank Stüber, Patrick J Heagerty, Hugh F Wellman, Mauricio Neira, Alexandra Dj Mancini, James A Russell.
Abstract
BACKGROUND: A genomic biomarker identifying patients likely to benefit from drotrecogin alfa (activated) (DAA) may be clinically useful as a companion diagnostic. This trial was designed to validate biomarkers (improved response polymorphisms (IRPs)). Each IRP (A and B) contains two single nucleotide polymorphisms that were associated with a differential DAA treatment effect.Entities:
Year: 2012 PMID: 22694772 PMCID: PMC3403963 DOI: 10.1186/2110-5820-2-15
Source DB: PubMed Journal: Ann Intensive Care ISSN: 2110-5820 Impact factor: 6.925
Baseline characteristics of replication cohorts before and after matching
| DrotAA(n = 103) | |||||||||
| | | | | | | | | | |
| Mean ± SD | 57.6 ± 15.6 | 62 ± 15.4 | 0.009 | 54.6 ±20.1 | 61 ± 14.9 | 0.072 | 58.4 ± 15.4 | 58.7 ± 15.3 | 0.886 |
| 35.9% | 41.4% | 0.32 | 44.7% | 33.5% | 0.178 | 40% | 36.8% | 0.596 | |
| | | | | | | | | | |
| Mean ± SD | 27 ± 7.4 | 0.253 | 25.7 ± 6.4 | 22.9 ± 7.2 | 0.02 | 27.1 ± 5.8 | 27 ± 5.9 | 0.862 | |
| 85.4% | 76.5% | 0.051 | 89.5% | 83.3% | 0.332 | 86.2% | 79.4% | 0.106 | |
| | | | | | | | | | |
| Cardiovascular | 100% | 100% | 1 | 84.2% | 82.4% | 0.783 | 95.4% | 96.2% | 0.418 |
| Respiratory | 85.4% | 85.4% | 0.994 | 94.7% | 93% | 0.686 | 86.9% | 86% | 0.71 |
| Renal | 61.2% | 46.2% | 0.007 | 47.4% | 46.3% | 0.899 | 59.2% | 55.5% | 0.172 |
| Hematologic | 23.3% | 19.5% | 0.391 | 13.2% | 13.7% | 0.934 | 19.2% | 15.1% | 0.292 |
| 98.1% | 93.5% | 0.073 | 100% | 89.4% | 0.036 | 99.2% | 99.2% | 1 | |
| 80.6% | 83.2% | 0.528 | NA | NA | NA | NA | |||
aWeighted values for control group.
Figure 1ARR was 19.7% for IRP A + patients (95% CI 2.2–37.1%) and −8.9% for IRP A − patients (95% CI −22.6 to 4.9%). The SNP-by-treatment interaction P value was 0.018 unadjusted and 0.066 adjusted for matching covariates. The proportion of patients who were IRP A + was 33.7% (140/415) in the replication cohort. The ARR was 21.2% for IRP B + patients (95% CI 3.2–39.2%) and −5% for IRP B − patients (95% CI −18.2 to 8.2%). The SNP-by-treatment interaction P value was 0.04 unadjusted and 0.069 adjusted for matching covariates. The proportion of patients who were IRP B + was 26.1% (107/410) in the replication cohort.
Figure 2In data transfer #1, data from each patient in each of the ten cohorts are submitted and patients are considered for eligibility criteria. Then, patients are segregated into the non-INDICATED (do not meet criteria for high risk of death as per FDA and EU approvals for DAA) and INDICATED (fulfill FDA or EU approvals for DAA) populations (see text for details). Then, DAA-treated patients are matched with DAA-free patients (controls). Subsequently, the matched sets are locked together. Then, the genotype and outcomes data are transferred (data transfer #2 described below) for each patient thereby creating a final dataset of non-INDICATED and INDICATED populations. Finally, the non-INDICATED and INDICATED datasets are merged to create the final dataset of the severe sepsis (SEVSEP) population. In parallel with the matching process, each center sends DNA for genotyping to the laboratory and genotyping is done while blinded to treatment group and outcome. The genotype data and outcome data are then sent via each center to the central dataset as data transfer #2.
Eligibility criteria for INDICATED population
| Eligibility criteria consistent with the approved use of DAA in the USA and the EU will define the INDICATED population as follows: | |
|---|---|
| 1 | Men or women age 18 years or older |
| 2 | Must have severe sepsis (must meet a, b, and c below) |
| a) | Suspected or proven infection |
| b) | Systemic inflammatory response syndrome (SIRS) (must meet 2 of 4 criteria) |
| i) | Temperature <36°C or >38°C |
| ii) | Heart rate >90 beats/minute |
| iii) | Respiratory rate >20 breaths/minute or PaC02 <32 mm Hg or on mechanical ventilation |
| iv) | White blood cell count <4,000/mm3 or >12,000/mm3 |
| a) | At least one organ dysfunction due to sepsis based on definitions of clinically significant organ dysfunction. |
| i) | Cardiovascular dysfunction [must meet one of (1), (2), or (3) below]: |
| (1) | systolic blood pressure ≤90 mmHg and pH ≤7.3 |
| (2) | mean arterial pressure ≤70 mmHg and pH ≤7.3 |
| (3) | reported use of a vasopressor alone is sufficient evidence of shock |
| i) | Pulmonary dysfunction: PaO2/FiO2 ≤300 mm Hg |
| ii) | Central Nervous System dysfunction: Glasgow Coma Score ≤12 |
| iii) | Coagulation dysfunction: platelets ≤80,000/mm3 |
| iv) | Renal dysfunction: creatinine ≥2.0 mg/dL |
| v) | Hepatic dysfunction: bilirubin ≥ 2.0 mg/dL |
| 1) | High risk of death (one of a, b, or c below) |
| a) | APACHE II ≥25 |
| b) | SAPS II ≥54 |
| c) | Multiple organ dysfunction – two or more clinically significant organ dysfunctions (as defined above), which have occurred within 2 days of each other |
| 2) | Platelet counts ≥30,000/mm3 |
| 3) | DAA status known |
Rationale for selected Mahalanobis distance variables
| Age | | √ | Increased age is associated with increased mortality [ |
| APACHE II or SAPS II | | Both are proven predictive mortality scores; DAA typically given to patients with higher scores [ | |
| Cardiovascular organ dysfunction | | Mortality is higher in patients with septic shock versus sepsis without shock; DAA believed to be particularly effective in patients with shock [ | |
| Respiratory organ dysfunction | √ | | Respiratory dysfunction increases mortality [ |
| Renal organ dysfunction | √ | | Renal dysfunction increases mortality [ |
| Hematologic organ dysfunction | | Hematologic dysfunction increases mortality [ | |
| Use of mechanical ventilation | √ | | Need for mechanical ventilation increases mortality [ |
| Medical or surgical status | | Type of admission is a variable in APACHE II and SAPS II [ | |
| Site of primary infection | Predicted mortality varies with site of primary infection, but this is mostly a DAA selection bias variable; DAA may be particularly helpful when lung is source of primary infection [ |