Literature DB >> 2269436

Gene conversion and splice-site slippage in the argininosuccinate lyases/delta-crystallins of the duck lens: members of an enzyme superfamily.

G J Wistow1, J Piatigorsky.   

Abstract

Argininosuccinate lyase(ASL)/delta-crystallin is a prominent example of an enzyme-crystallin with roles as both a catalyst and a major structural component of the eye lens in birds and reptiles. In chicken it appears that gene duplication and separation of function may have occurred with one gene product acting primarily as a crystallin and one primarily as an enzyme. However, two delta-crystallin-encoding genes are abundantly expressed in the lens of the embryonic duck (Anas platyrhynchos) which has extremely high ASL activity. Here the isolation and sequence analysis of full length cDNA clones for both duck delta-crystallins are described. The two delta-crystallins are highly similar (94% identical in predicted aa sequence), probably as a result of gene conversion. However, the cDNA for duck delta 2-crystallin contains an in-frame insertion of two codons, probably the result of a recent intron boundary slippage. ASL/delta-crystallin belongs to a superfamily of lyases, including fumarases, aspartases and adenylosuccinate lyase which possess some highly conserved blocks of aa sequence. There may be some clues to the tertiary structures of these conserved motifs in otherwise unrelated proteins for which three-dimensional structures are known.

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Year:  1990        PMID: 2269436     DOI: 10.1016/0378-1119(90)90262-p

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  11 in total

1.  Biochemical characterization and kinetic analysis of duck delta-crystallin with endogenous argininosuccinate lyase activity.

Authors:  H J Lee; S H Chiou; G G Chang
Journal:  Biochem J       Date:  1992-04-15       Impact factor: 3.857

2.  Taxon-specific recruitment of enzymes as major soluble proteins in the corneal epithelium of three mammals, chicken, and squid.

Authors:  R A Cuthbertson; S I Tomarev; J Piatigorsky
Journal:  Proc Natl Acad Sci U S A       Date:  1992-05-01       Impact factor: 11.205

Review 3.  An enzyme in the test tube, and a transcription factor in the cell: Moonlighting proteins and cellular factors that affect their behavior.

Authors:  Constance J Jeffery
Journal:  Protein Sci       Date:  2019-05-24       Impact factor: 6.725

4.  Domain exchange experiments in duck delta-crystallins: functional and evolutionary implications.

Authors:  L M Sampaleanu; A R Davidson; C Graham; G J Wistow; P L Howell
Journal:  Protein Sci       Date:  1999-03       Impact factor: 6.725

Review 5.  Transcriptional regulation of genes for ornithine cycle enzymes.

Authors:  M Takiguchi; M Mori
Journal:  Biochem J       Date:  1995-12-15       Impact factor: 3.857

6.  The molecular refractive function of lens γ-Crystallins.

Authors:  Huaying Zhao; Patrick H Brown; M Teresa Magone; Peter Schuck
Journal:  J Mol Biol       Date:  2011-06-12       Impact factor: 5.469

7.  Sequencing and heterologous expression of an epimerase and two lyases from iminodisuccinate-degrading bacteria.

Authors:  Bettina Bäuerle; Zeljko Cokesa; Silvia Hofmann; Paul-Gerhard Rieger
Journal:  Appl Environ Microbiol       Date:  2006-04       Impact factor: 4.792

Review 8.  Intragenic complementation at the argininosuccinate lyase locus: reconstruction of the active site.

Authors:  P L Howell; M A Turner; J Christodoulou; D C Walker; H J Craig; L R Simard; L Ploder; R R McInnes
Journal:  J Inherit Metab Dis       Date:  1998       Impact factor: 4.982

9.  On "genomenclature": a comprehensive (and respectful) taxonomy for pseudogenes and other "junk DNA".

Authors:  J Brosius; S J Gould
Journal:  Proc Natl Acad Sci U S A       Date:  1992-11-15       Impact factor: 11.205

10.  Kinetic refolding barrier of guanidinium chloride denatured goose delta-crystallin leads to regular aggregate formation.

Authors:  Fon-Yi Yin; Ya-Huei Chen; Chung-Ming Yu; Yu-Chin Pon; Hwei-Jen Lee
Journal:  Biophys J       Date:  2007-05-18       Impact factor: 4.033

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