Literature DB >> 22692743

Evaluation of the Andromas matrix-assisted laser desorption ionization-time of flight mass spectrometry system for identification of aerobically growing Gram-positive bacilli.

E Farfour1, J Leto, M Barritault, C Barberis, J Meyer, B Dauphin, A-S Le Guern, A Leflèche, E Badell, N Guiso, A Leclercq, A Le Monnier, M Lecuit, V Rodriguez-Nava, E Bergeron, J Raymond, S Vimont, E Bille, E Carbonnelle, H Guet-Revillet, H Lécuyer, J-L Beretti, C Vay, P Berche, A Ferroni, X Nassif, O Join-Lambert.   

Abstract

Matrix-associated laser desorption ionization-time of flight mass spectrometry (MALDI-TOF MS) is a rapid and simple microbial identification method. Previous reports using the Biotyper system suggested that this technique requires a preliminary extraction step to identify Gram-positive rods (GPRs), a technical issue that may limit the routine use of this technique to identify pathogenic GPRs in the clinical setting. We tested the accuracy of the MALDI-TOF MS Andromas strategy to identify a set of 659 GPR isolates representing 16 bacterial genera and 72 species by the direct colony method. This bacterial collection included 40 C. diphtheriae, 13 C. pseudotuberculosis, 19 C. ulcerans, and 270 other Corynebacterium isolates, 32 L. monocytogenes and 24 other Listeria isolates, 46 Nocardia, 75 Actinomyces, 18 Actinobaculum, 11 Propionibacterium acnes, 18 Propionibacterium avidum, 30 Lactobacillus, 21 Bacillus, 2 Rhodococcus equi, 2 Erysipelothrix rhusiopathiae, and 38 other GPR isolates, all identified by reference techniques. Totals of 98.5% and 1.2% of non-Listeria GPR isolates were identified to the species or genus level, respectively. Except for L. grayi isolates that were identified to the species level, all other Listeria isolates were identified to the genus level because of highly similar spectra. These data demonstrate that rapid identification of pathogenic GPRs can be obtained without an extraction step by MALDI-TOF mass spectrometry.

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Year:  2012        PMID: 22692743      PMCID: PMC3421524          DOI: 10.1128/JCM.00368-12

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  53 in total

1.  MALDI-TOF MS Andromas strategy for the routine identification of bacteria, mycobacteria, yeasts, Aspergillus spp. and positive blood cultures.

Authors:  E Bille; B Dauphin; J Leto; M-E Bougnoux; J-L Beretti; A Lotz; S Suarez; J Meyer; O Join-Lambert; P Descamps; N Grall; F Mory; L Dubreuil; P Berche; X Nassif; A Ferroni
Journal:  Clin Microbiol Infect       Date:  2011-11-01       Impact factor: 8.067

2.  Corynebacterium pseudotuberculosis necrotizing lymphadenitis in a twelve-year-old patient.

Authors:  Olivier F Join-Lambert; Marie Ouache; Danielle Canioni; Jean-Luc Beretti; Stéphane Blanche; Patrick Berche; Samer Kayal
Journal:  Pediatr Infect Dis J       Date:  2006-09       Impact factor: 2.129

3.  Use of PCR-restriction enzyme pattern analysis and sequencing database for hsp65 gene-based identification of Nocardia species.

Authors:  Verónica Rodríguez-Nava; Andrée Couble; Gregory Devulder; Jean-Pierre Flandrois; Patrick Boiron; Frédéric Laurent
Journal:  J Clin Microbiol       Date:  2006-02       Impact factor: 5.948

4.  Rapid identification of Staphylococci isolated in clinical microbiology laboratories by matrix-assisted laser desorption ionization-time of flight mass spectrometry.

Authors:  Etienne Carbonnelle; Jean-Luc Beretti; Stéphanie Cottyn; Gilles Quesne; Patrick Berche; Xavier Nassif; Agnès Ferroni
Journal:  J Clin Microbiol       Date:  2007-05-16       Impact factor: 5.948

5.  Identification of clinical coryneform bacterial isolates: comparison of biochemical methods and sequence analysis of 16S rRNA and rpoB genes.

Authors:  Elisabeth E Adderson; Jan W Boudreaux; Jessica R Cummings; Stanley Pounds; Deborah A Wilson; Gary W Procop; Randall T Hayden
Journal:  J Clin Microbiol       Date:  2007-12-26       Impact factor: 5.948

6.  Ten cases of Actinobaculum schaalii infection: clinical relevance, bacterial identification, and antibiotic susceptibility.

Authors:  Mark Reinhard; Jørgen Prag; Michael Kemp; Keld Andresen; Belinda Klemmensen; Niels Højlyng; Susan Hildebrand Sørensen; Jens Jørgen Christensen
Journal:  J Clin Microbiol       Date:  2005-10       Impact factor: 5.948

7.  Multiplex PCR assay for identification of Corynebacterium pseudotuberculosis from pure cultures and for rapid detection of this pathogen in clinical samples.

Authors:  Luis G C Pacheco; Roberta R Pena; Thiago L P Castro; Fernanda A Dorella; Robson C Bahia; Renato Carminati; Marcílio N L Frota; Sérgio C Oliveira; Roberto Meyer; Francisco S F Alves; Anderson Miyoshi; Vasco Azevedo
Journal:  J Med Microbiol       Date:  2007-04       Impact factor: 2.472

8.  A PCR for dtxR gene: application to diagnosis of non-toxigenic and toxigenic Corynebacterium diphtheriae.

Authors:  Fabricia P Pimenta; Gisele A M Matias; Gabriela A Pereira; Thereza C F Camello; Gabriela B Alves; Ana C P Rosa; Raphael Hirata; Ana L Mattos-Guaraldi
Journal:  Mol Cell Probes       Date:  2008-02-14       Impact factor: 2.365

Review 9.  Actinomyces--gathering evidence of human colonization and infection.

Authors:  Val Hall
Journal:  Anaerobe       Date:  2007-12-05       Impact factor: 3.331

Review 10.  Propionibacterium acnes.

Authors:  A L Perry; P A Lambert
Journal:  Lett Appl Microbiol       Date:  2006-03       Impact factor: 2.858

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  30 in total

1.  Actinomyces urogenitalis bacteremia and tubo-ovarian abscess after an in vitro fertilization (IVF) procedure.

Authors:  Frederik Van Hoecke; Ellen Beuckelaers; Peter Lissens; Michael Boudewijns
Journal:  J Clin Microbiol       Date:  2013-09-11       Impact factor: 5.948

Review 2.  Matrix-assisted laser desorption ionization-time of flight mass spectrometry: a fundamental shift in the routine practice of clinical microbiology.

Authors:  Andrew E Clark; Erin J Kaleta; Amit Arora; Donna M Wolk
Journal:  Clin Microbiol Rev       Date:  2013-07       Impact factor: 26.132

Review 3.  Turicella otitidis and Corynebacterium auris: 20 years on.

Authors:  A von Graevenitz; G Funke
Journal:  Infection       Date:  2013-06-18       Impact factor: 3.553

4.  Cardiac device-related endocarditis caused by Paenibacillus glucanolyticus.

Authors:  Janina Ferrand; Tahar Hadou; Christine Selton-Suty; François Goehringer; Nicolas Sadoul; Corentine Alauzet; Alain Lozniewski
Journal:  J Clin Microbiol       Date:  2013-07-24       Impact factor: 5.948

5.  Bruker biotyper matrix-assisted laser desorption ionization-time of flight mass spectrometry system for identification of Nocardia, Rhodococcus, Kocuria, Gordonia, Tsukamurella, and Listeria species.

Authors:  Po-Ren Hsueh; Tai-Fen Lee; Shin-Hei Du; Shih-Hua Teng; Chun-Hsing Liao; Wang-Hui Sheng; Lee-Jene Teng
Journal:  J Clin Microbiol       Date:  2014-04-23       Impact factor: 5.948

Review 6.  Clinical and Biological Features of Cutibacterium (Formerly Propionibacterium) avidum, an Underrecognized Microorganism.

Authors:  Stéphane Corvec
Journal:  Clin Microbiol Rev       Date:  2018-05-30       Impact factor: 26.132

7.  "Probable contaminants" no more: rapid identification of Gram-positive rods leads to improved clinical care.

Authors:  Genevieve McKew; Bradley Watson; Raymond Chan; Sebastiaan J van Hal
Journal:  J Clin Microbiol       Date:  2013-02-13       Impact factor: 5.948

8.  Evaluation of the Bruker MALDI Biotyper for identification of Gram-positive rods: development of a diagnostic algorithm for the clinical laboratory.

Authors:  Bettina Schulthess; Guido V Bloemberg; Reinhard Zbinden; Erik C Böttger; Michael Hombach
Journal:  J Clin Microbiol       Date:  2014-01-22       Impact factor: 5.948

9.  16S rRNA gene sequencing, multilocus sequence analysis, and mass spectrometry identification of the proposed new species "Clostridium neonatale".

Authors:  Philippe Bouvet; Laurent Ferraris; Brunhilde Dauphin; Michel-Robert Popoff; Marie Jose Butel; Julio Aires
Journal:  J Clin Microbiol       Date:  2014-09-17       Impact factor: 5.948

Review 10.  The Complexities of Nocardia Taxonomy and Identification.

Authors:  Patricia S Conville; Barbara A Brown-Elliott; Terry Smith; Adrian M Zelazny
Journal:  J Clin Microbiol       Date:  2017-12-26       Impact factor: 5.948

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